RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 OR4C46A6NHA9 309 aa11.39□□□□□ -0.59
MRPS28-209ENST00000522987 A6NJ64 397 aa11.39□□□□□ -0.59
MRPS28-209ENST00000522987 SNAPC5O75971 98 aa11.39□□□□□ -0.59
MRPS28-209ENST00000522987 YIF1AO95070 293 aa11.39□□□□□ -0.59
MRPS28-209ENST00000522987 ATP6V1G2O95670 118 aa11.39□□□□□ -0.59
MRPS28-209ENST00000522987 SCAND1P57086 179 aa11.39□□□□□ -0.59
MRPS28-209ENST00000522987 LSM3P62310 102 aaKnown RBP11.39□□□□□ -0.59
MRPS28-209ENST00000522987 OR5H2Q8NGV7 314 aa11.39□□□□□ -0.59
MRPS28-209ENST00000522987 MOB3AQ96BX8 217 aa11.39□□□□□ -0.59
MRPS28-209ENST00000522987 DGCR14Q96DF8 476 aaKnown RBP11.39□□□□□ -0.59
MRPS28-209ENST00000522987 ZNF414Q96IQ9 312 aa11.39□□□□□ -0.59
MRPS28-209ENST00000522987 TP53TG1Q9Y2A0 90 aa11.39□□□□□ -0.59
MRPS28-209ENST00000522987 XRCC3O43542 346 aa11.38□□□□□ -0.59
MRPS28-209ENST00000522987 HLA-DMAP28067 261 aa11.38□□□□□ -0.59
MRPS28-209ENST00000522987 TAS2R20P59543 309 aa11.38□□□□□ -0.59
MRPS28-209ENST00000522987 SPINK9Q5DT21 86 aa11.38□□□□□ -0.59
MRPS28-209ENST00000522987 THOC7Q6I9Y2 204 aaKnown RBP11.38□□□□□ -0.59
MRPS28-209ENST00000522987 SPSB3Q6PJ21 355 aa11.38□□□□□ -0.59
MRPS28-209ENST00000522987 SAMD12Q8N8I0 201 aa11.38□□□□□ -0.59
MRPS28-209ENST00000522987 PHLDA1Q8WV24 401 aaPredicted RBP11.38□□□□□ -0.59
MRPS28-209ENST00000522987 SLC25A46Q96AG3 418 aa11.38□□□□□ -0.59
MRPS28-209ENST00000522987 MAP6D1Q9H9H5 199 aa11.38□□□□□ -0.59
MRPS28-209ENST00000522987 SMPXQ9UHP9 88 aa11.38□□□□□ -0.59
MRPS28-209ENST00000522987 UBE2CO00762 179 aa11.37□□□□□ -0.59
MRPS28-209ENST00000522987 DEFB4AO15263 64 aa11.37□□□□□ -0.59
MRPS28-209ENST00000522987 CTSGP08311 255 aa11.37□□□□□ -0.59
MRPS28-209ENST00000522987 TMEM69Q5SWH9 247 aa11.37□□□□□ -0.59
MRPS28-209ENST00000522987 PINX1Q96BK5 328 aaKnown RBP11.37□□□□□ -0.59
MRPS28-209ENST00000522987 GALNT14Q96FL9 552 aa11.37□□□□□ -0.59
MRPS28-209ENST00000522987 S100A16Q96FQ6 103 aaKnown RBP11.37□□□□□ -0.59
MRPS28-209ENST00000522987 RHPN1-AS1Q9BWJ2 59 aa11.37□□□□□ -0.59
MRPS28-209ENST00000522987 Q9H521 79 aa11.37□□□□□ -0.59
MRPS28-209ENST00000522987 KLK5Q9Y337 293 aaPredicted RBP11.37□□□□□ -0.59
MRPS28-209ENST00000522987 IGHV3-66A0A0C4DH42 116 aa11.36□□□□□ -0.59
MRPS28-209ENST00000522987 KIR2DL5BA0A0G2JN68 375 aa11.36□□□□□ -0.59
MRPS28-209ENST00000522987 KIR2DL5BA0A0G2JPC4 375 aa11.36□□□□□ -0.59
MRPS28-209ENST00000522987 IGHV7-4-1A0A0J9YVY3 117 aa11.36□□□□□ -0.59
MRPS28-209ENST00000522987 GPR31O00270 319 aa11.36□□□□□ -0.59
MRPS28-209ENST00000522987 CHEK1O14757 476 aa11.36□□□□□ -0.59
MRPS28-209ENST00000522987 HRH1P35367 487 aa11.36□□□□□ -0.59
MRPS28-209ENST00000522987 NANOS2P60321 138 aaKnown RBP11.36□□□□□ -0.59
MRPS28-209ENST00000522987 IZUMO4Q1ZYL8 232 aa11.36□□□□□ -0.59
MRPS28-209ENST00000522987 UBE2NLQ5JXB2 153 aa11.36□□□□□ -0.59
MRPS28-209ENST00000522987 DHRS11Q6UWP2 260 aa11.36□□□□□ -0.59
MRPS28-209ENST00000522987 HSD17B13Q7Z5P4 300 aaPredicted RBP11.36□□□□□ -0.59
MRPS28-209ENST00000522987 KIR2DL5AQ8N109 375 aa11.36□□□□□ -0.59
MRPS28-209ENST00000522987 TMEM116Q8NCL8 245 aa11.36□□□□□ -0.59
MRPS28-209ENST00000522987 KIR2DL5BQ8NHK3 375 aa11.36□□□□□ -0.59
MRPS28-209ENST00000522987 TMEM56Q96MV1 263 aa11.36□□□□□ -0.59
MRPS28-209ENST00000522987 YTHDF1Q9BYJ9 559 aaKnown RBP11.36□□□□□ -0.59
MRPS28-209ENST00000522987 FBXL17Q9UF56 701 aa11.36□□□□□ -0.59
MRPS28-209ENST00000522987 PRNDQ9UKY0 176 aa11.36□□□□□ -0.59
MRPS28-209ENST00000522987 FRAS1Q86XX4 4008 aa11.36□□□□□ -0.59
MRPS28-209ENST00000522987 C15orf61A6NNL5 157 aa11.35□□□□□ -0.59
MRPS28-209ENST00000522987 C15orf62A8K5M9 175 aa11.35□□□□□ -0.59
MRPS28-209ENST00000522987 K7EMT4 169 aa11.35□□□□□ -0.59
MRPS28-209ENST00000522987 NUPL2O15504 423 aaKnown RBP11.35□□□□□ -0.59
MRPS28-209ENST00000522987 RPS19P39019 145 aaKnown RBP11.35□□□□□ -0.59
MRPS28-209ENST00000522987 RNASE12Q5GAN4 147 aaKnown RBP11.35□□□□□ -0.59
MRPS28-209ENST00000522987 CMTM1Q8IZ96 169 aa11.35□□□□□ -0.59
MRPS28-209ENST00000522987 OR6F1Q8NGZ6 308 aa11.35□□□□□ -0.59
MRPS28-209ENST00000522987 BORCS5Q969J3 196 aa11.35□□□□□ -0.59
MRPS28-209ENST00000522987 ANAPC10Q9UM13 185 aa11.35□□□□□ -0.59
MRPS28-209ENST00000522987 MT-CO2P00403 227 aa11.34□□□□□ -0.59
MRPS28-209ENST00000522987 IGKV1-39P01597 117 aa11.34□□□□□ -0.59
MRPS28-209ENST00000522987 IGKV1D-39P04432 117 aa11.34□□□□□ -0.59
MRPS28-209ENST00000522987 EIF4EP06730 217 aaKnown RBP11.34□□□□□ -0.59
MRPS28-209ENST00000522987 MFAP4P55083 255 aa11.34□□□□□ -0.59
MRPS28-209ENST00000522987 TAS2R46P59540 309 aa11.34□□□□□ -0.59
MRPS28-209ENST00000522987 TSPAN5P62079 268 aa11.34□□□□□ -0.59
MRPS28-209ENST00000522987 TBC1D26Q86UD7 250 aa11.34□□□□□ -0.59
MRPS28-209ENST00000522987 LYSMD2Q8IV50 215 aa11.34□□□□□ -0.59
MRPS28-209ENST00000522987 MRGPRFQ96AM1 343 aa11.34□□□□□ -0.59
MRPS28-209ENST00000522987 RARRES2Q99969 163 aa11.34□□□□□ -0.59
MRPS28-209ENST00000522987 KRTAP17-1Q9BYP8 105 aa11.34□□□□□ -0.59
MRPS28-209ENST00000522987 CSTL1Q9H114 145 aa11.34□□□□□ -0.59
MRPS28-209ENST00000522987 TMEM14BQ9NUH8 114 aa11.34□□□□□ -0.59
MRPS28-209ENST00000522987 MPTX1A8MV57 137 aa11.33□□□□□ -0.6
MRPS28-209ENST00000522987 I3L2K1 104 aa11.33□□□□□ -0.6
MRPS28-209ENST00000522987 GNG7O60262 68 aa11.33□□□□□ -0.6
MRPS28-209ENST00000522987 APOHP02749 345 aaPredicted RBP11.33□□□□□ -0.6
MRPS28-209ENST00000522987 FGF2P09038 288 aa11.33□□□□□ -0.6
MRPS28-209ENST00000522987 PRSS3P35030 304 aa11.33□□□□□ -0.6
MRPS28-209ENST00000522987 RELQ04864 619 aaPredicted RBP11.33□□□□□ -0.6
MRPS28-209ENST00000522987 LEMD1Q68G75 181 aa11.33□□□□□ -0.6
MRPS28-209ENST00000522987 TCF24Q7RTU0 167 aa11.33□□□□□ -0.6
MRPS28-209ENST00000522987 H2BFWTQ7Z2G1 175 aa11.33□□□□□ -0.6
MRPS28-209ENST00000522987 SNX29P2Q8IUI4 249 aa11.33□□□□□ -0.6
MRPS28-209ENST00000522987 TMEM217Q8N7C4 229 aa11.33□□□□□ -0.6
MRPS28-209ENST00000522987 OR1P1Q8NH06 330 aa11.33□□□□□ -0.6
MRPS28-209ENST00000522987 OR11H2Q8NH07 326 aa11.33□□□□□ -0.6
MRPS28-209ENST00000522987 OR4A16Q8NH70 328 aa11.33□□□□□ -0.6
MRPS28-209ENST00000522987 ST8SIA2Q92186 375 aa11.33□□□□□ -0.6
MRPS28-209ENST00000522987 C6orf62Q9GZU0 229 aaPredicted RBP11.33□□□□□ -0.6
MRPS28-209ENST00000522987 KMT2AQ03164 3969 aa11.33□□□□□ -0.6
MRPS28-209ENST00000522987 TRAV14DV4A0A0A6YYC5 116 aa11.32□□□□□ -0.6
MRPS28-209ENST00000522987 NAT1P18440 290 aa11.32□□□□□ -0.6
MRPS28-209ENST00000522987 LILRB2Q8N423 598 aa11.32□□□□□ -0.6
MRPS28-209ENST00000522987 FAM24BQ8N5W8 94 aa11.32□□□□□ -0.6
MRPS28-209ENST00000522987 SEC22AQ96IW7 307 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms