RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 LOXP28300 417 aaPredicted RBP6.06□□□□□ -1.44
CLIP1-205ENST00000514271 GLRXP35754 106 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 MYCNOSP40205 109 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 RHOBP62745 196 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 PAX8Q06710 450 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 ATP6V1FQ16864 119 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 OR8G2PQ6IF36 304 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 DTX2Q86UW9 622 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.06□□□□□ -1.44
CLIP1-205ENST00000514271 LYG1Q8N1E2 194 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 RNF2Q99496 336 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 GNG13Q9P2W3 67 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 IL36RNQ9UBH0 155 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 ST3GAL6Q9Y274 331 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 UBE2J1Q9Y385 318 aaPredicted RBP6.06□□□□□ -1.44
CLIP1-205ENST00000514271 A0A1B0GXF2 115 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 RBMXL2O75526 392 aaKnown RBP6.06□□□□□ -1.44
CLIP1-205ENST00000514271 PSG2P11465 335 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 PPOXP50336 477 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 ZNF146Q15072 292 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 ZNF672Q499Z4 452 aaPredicted RBP6.06□□□□□ -1.44
CLIP1-205ENST00000514271 DDB2Q92466 427 aa6.06□□□□□ -1.44
CLIP1-205ENST00000514271 PDE6DO43924 150 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 BCL3P20749 454 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 CA6P23280 308 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 RPL29P47914 159 aaKnown RBP6.05□□□□□ -1.44
CLIP1-205ENST00000514271 PSMB3P49720 205 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 UFSP1Q6NVU6 142 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 WFDC8Q8IUA0 241 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 NEUROG1Q92886 237 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 SFRP2Q96HF1 295 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 OR51I2Q9H344 312 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 ZNF701Q9NV72 531 aaPredicted RBP6.05□□□□□ -1.44
CLIP1-205ENST00000514271 POLR1DQ9Y2S0 133 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 IGHV2OR16-5A0A0B4J2B6 119 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 LRP5LA4QPB2 252 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 C17orf98A8MV24 154 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 OR2J3O76001 311 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 NRASP01111 189 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 PRR20EP86478 221 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 PRR20CP86479 221 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 PRR20DP86480 221 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 PRR20BP86481 221 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 PRR20AP86496 221 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 HLA-DRB5Q30154 266 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 INTS1Q8N201 2190 aaKnown RBP6.05□□□□□ -1.44
CLIP1-205ENST00000514271 SGMS2Q8NHU3 365 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 DNAJA3Q96EY1 480 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 PLPPR2Q96GM1 343 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 DERL1Q9BUN8 251 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 ALPK2Q86TB3 2170 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 PIGBOS1A0A0B4J2F0 54 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.05□□□□□ -1.44
CLIP1-205ENST00000514271 A0A1W2PS18 150 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 ADH4P08319 380 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 AKR1C8PQ5T2L2 129 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 MDP1Q86V88 176 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 OR8B3Q8NGG8 313 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 OR52E5Q8NH55 327 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 OR8B2Q96RD0 313 aa6.05□□□□□ -1.44
CLIP1-205ENST00000514271 CNTRLQ7Z7A1 2325 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 IGHV1-18A0A0C4DH31 117 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 ZNF816-ZNF321PA0A0X1KG74 233 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 C19orf84I3L1E1 186 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 ZNHIT1O43257 154 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 LINC00869P0C866 280 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 ZNF83P51522 516 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 GDF5OSQ5U4N7 250 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 ZNF66Q6ZN08 573 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 OR2AE1Q8NHA4 323 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 NEU4Q8WWR8 484 aaPredicted RBP6.04□□□□□ -1.44
CLIP1-205ENST00000514271 GPHA2Q96T91 129 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 IL36BQ9NZH7 164 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 PPP1R3CQ9UQK1 317 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 ZFHX3Q15911 3703 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 A0A1W2PR80 420 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 M0R1B8 84 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 HLA-DRB1P01911 266 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 B4GALT1P15291 398 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 HOXB4P17483 251 aaPredicted RBP6.04□□□□□ -1.44
CLIP1-205ENST00000514271 KITLGP21583 273 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 GRNP28799 593 aaKnown RBP6.04□□□□□ -1.44
CLIP1-205ENST00000514271 DUTP33316 252 aaKnown RBP6.04□□□□□ -1.44
CLIP1-205ENST00000514271 CX3CL1P78423 397 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 MALLQ13021 153 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 RASL11AQ6T310 242 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 SLC35E1Q96K37 410 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 RCHY1Q96PM5 261 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 FOXC2Q99958 501 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 YTHDF2Q9Y5A9 579 aaKnown RBP6.04□□□□□ -1.44
CLIP1-205ENST00000514271 COX11Q9Y6N1 276 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 LINC01546A6NGU7 62 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 LRRC30A6NM36 301 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 M0QXV9 152 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 ZNF32P17041 273 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 OPRK1P41145 380 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 DMRTC1Q5HYR2 192 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 C11orf53Q8IXP5 236 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 ZDHHC23Q8IYP9 409 aa6.04□□□□□ -1.44
CLIP1-205ENST00000514271 LINC01560Q8TB33 94 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms