RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 IGKV1-5P01602 117 aa10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 OR9G9P0C7N8 305 aa10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 PMCHP20382 165 aa10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 LY6EQ16553 131 aa10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 IGF2-ASQ6U949 168 aa10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 Q6ZR03 302 aa10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 LOC102723971A0A1B0GUV8 181 aa10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 ZNF253O75346 499 aa10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 MOSP00540 346 aa10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 CRYBB3P26998 211 aa10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 NCMAPQ5T1S8 102 aa10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 CYP2G1PQ6ZSU1 146 aa10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 TMEM144Q7Z5S9 345 aa10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 IGKV1-6A0A0C4DH72 117 aa10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 BMPR1BO00238 502 aa10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 SRSF4Q08170 494 aaKnown RBP10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 TMEM200BQ69YZ2 307 aa10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 FA2HQ7L5A8 372 aa10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 MRPL32Q9BYC8 188 aaKnown RBP10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 CLEC5AQ9NY25 188 aa10.85□□□□□ -0.67
PCDHA4-202ENST00000512229 FGF16O43320 207 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 IGLV1-44P01699 117 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 SMIM17P0DL12 118 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 LMO1P25800 156 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 PPP1R27Q86WC6 154 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 TNFRSF14Q92956 283 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 MS4A10Q96PG2 267 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 IFT22Q9H7X7 185 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 IER3P46695 156 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 ANAPC10Q9UM13 185 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 IGHV3-35A0A0C4DH35 117 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 SNURFLB1AK76 121 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 ORM1P02763 201 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 C5orf17Q8NAS9 161 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 RNASEH2CQ8TDP1 164 aaKnown RBP10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 WFDC1Q9HC57 220 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 CSPG4Q6UVK1 2322 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 E7EQL1 145 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 PMS2P11Q13670 270 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 PRNTQ86SH4 94 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 NEUROG1Q92886 237 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 NAGKQ9UJ70 344 aa10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 CARHSP1Q9Y2V2 147 aaKnown RBP10.84□□□□□ -0.67
PCDHA4-202ENST00000512229 CHD7Q9P2D1 2997 aa10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 KIAA1549LQ6ZVL6 1849 aa10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 FAM90A9PA6NNJ1 464 aa10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 MFAP2P55001 183 aa10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 CYTL1Q9NRR1 136 aa10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 CRIM1Q9NZV1 1036 aa10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 RABAC1Q9UI14 185 aa10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 A8MWL6 223 aa10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 IL4P05112 153 aa10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 MDKP21741 143 aaPredicted RBP10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 WDR86Q86TI4 376 aa10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 OR2D3Q8NGH3 330 aa10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 PRSS3P2Q8NHM4 247 aa10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 GAFA1Q96PS6 74 aa10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 RPL7P18124 248 aaKnown RBP10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 GNLYP22749 145 aa10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 AMTP48728 403 aa10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 ERVK11-1P61568 191 aa10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 C3orf36Q3SXR2 165 aa10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 IBA57Q5T440 356 aaKnown RBP10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 WDR25Q64LD2 544 aaPredicted RBP10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 C7orf69Q9H7B7 122 aa10.83□□□□□ -0.68
PCDHA4-202ENST00000512229 CXorf65A6NEN9 183 aa10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 SRP19P09132 144 aaKnown RBP10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 FAM3BP58499 235 aaPredicted RBP10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 PRCDQ00LT1 54 aa10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 RNASEKQ6P5S7 137 aaKnown RBP10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 LINC00305Q7Z4B0 112 aa10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 OR52E5Q8NH55 327 aa10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 SRSF12Q8WXF0 261 aaKnown RBP10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 METTL26Q96S19 204 aa10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 WDR83OSQ9Y284 106 aa10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 LINC00473A8K010 186 aa10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 IGHV1-8P0DP01 117 aa10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 GATA2P23769 480 aaPredicted RBP10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 EAF1Q96JC9 268 aaPredicted RBP10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 WIPF3A6NGB9 483 aa10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 H3BTX0 84 aa10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 K7EM74 188 aa10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 CD24P25063 80 aa10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 DENND4AQ7Z401 1863 aa10.82□□□□□ -0.68
PCDHA4-202ENST00000512229 NBR2O15453 112 aa10.81□□□□□ -0.68
PCDHA4-202ENST00000512229 CEACAM4O75871 244 aa10.81□□□□□ -0.68
PCDHA4-202ENST00000512229 OR2J3O76001 311 aa10.81□□□□□ -0.68
PCDHA4-202ENST00000512229 SLC35B1P78383 322 aa10.81□□□□□ -0.68
PCDHA4-202ENST00000512229 PAX6P26367 422 aa10.81□□□□□ -0.68
PCDHA4-202ENST00000512229 GPX4P36969 197 aaPredicted RBP10.81□□□□□ -0.68
PCDHA4-202ENST00000512229 LINC00205P59089 165 aa10.81□□□□□ -0.68
PCDHA4-202ENST00000512229 RIGQ13278 110 aa10.81□□□□□ -0.68
PCDHA4-202ENST00000512229 TEX45Q8NA69 505 aa10.81□□□□□ -0.68
PCDHA4-202ENST00000512229 BET1LQ9NYM9 111 aa10.81□□□□□ -0.68
PCDHA4-202ENST00000512229 MUC22E2RYF6 1773 aaPredicted RBP10.81□□□□□ -0.68
PCDHA4-202ENST00000512229 TMSB15BA0A087X1C1 80 aa10.81□□□□□ -0.68
PCDHA4-202ENST00000512229 TRGC2P03986 189 aa10.81□□□□□ -0.68
PCDHA4-202ENST00000512229 AGAP20933 346 aa10.81□□□□□ -0.68
PCDHA4-202ENST00000512229 EFNA4P52798 201 aa10.81□□□□□ -0.68
PCDHA4-202ENST00000512229 GBGT1Q8N5D6 347 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms