RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 RNF126Q9BV68 326 aa8.45□□□□□ -1.06
RNF4-216ENST00000511859 OR2D2Q9H210 308 aa8.45□□□□□ -1.06
RNF4-216ENST00000511859 SCPEP1Q9HB40 452 aa8.45□□□□□ -1.06
RNF4-216ENST00000511859 ANXA10Q9UJ72 324 aa8.45□□□□□ -1.06
RNF4-216ENST00000511859 LRP1BQ9NZR2 4599 aa8.44□□□□□ -1.06
RNF4-216ENST00000511859 DMBT1Q9UGM3 2413 aaPredicted RBP8.44□□□□□ -1.06
RNF4-216ENST00000511859 TRAV10A0A0B4J240 114 aa8.44□□□□□ -1.06
RNF4-216ENST00000511859 M0QYG6 137 aa8.44□□□□□ -1.06
RNF4-216ENST00000511859 SULT1C2O00338 296 aa8.44□□□□□ -1.06
RNF4-216ENST00000511859 DEFB4AO15263 64 aa8.44□□□□□ -1.06
RNF4-216ENST00000511859 CRYZL1O95825 349 aa8.44□□□□□ -1.06
RNF4-216ENST00000511859 CRYGCP07315 174 aa8.44□□□□□ -1.06
RNF4-216ENST00000511859 RFX2P48378 723 aa8.44□□□□□ -1.06
RNF4-216ENST00000511859 SOHLH1Q5JUK2 328 aa8.44□□□□□ -1.06
RNF4-216ENST00000511859 LYSMD2Q8IV50 215 aa8.44□□□□□ -1.06
RNF4-216ENST00000511859 ZNF645Q8N7E2 425 aa8.44□□□□□ -1.06
RNF4-216ENST00000511859 OR10J5Q8NHC4 309 aa8.44□□□□□ -1.06
RNF4-216ENST00000511859 C15orf40Q8WUR7 153 aa8.44□□□□□ -1.06
RNF4-216ENST00000511859 SMIM4Q8WVI0 70 aa8.44□□□□□ -1.06
RNF4-216ENST00000511859 FYTTD1Q96QD9 318 aaKnown RBP8.44□□□□□ -1.06
RNF4-216ENST00000511859 SLC2A9Q9NRM0 540 aa8.44□□□□□ -1.06
RNF4-216ENST00000511859 S4R3C0 116 aa8.44□□□□□ -1.06
RNF4-216ENST00000511859 HMX3A6NHT5 357 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 TEX22C9J3V5 150 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 S1PR2O95136 353 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 SAA1P0DJI8 122 aaPredicted RBP8.43□□□□□ -1.06
RNF4-216ENST00000511859 NFYAP23511 347 aaPredicted RBP8.43□□□□□ -1.06
RNF4-216ENST00000511859 RCVRNP35243 200 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 HRH1P35367 487 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 ETV6P41212 452 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 TMEM187Q14656 261 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 PLET1Q6UQ28 207 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 Q6ZS49 121 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 APRG1Q8IVJ8 170 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 MFSD4AQ8N468 514 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 OR5AP2Q8NGF4 316 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 OR5H2Q8NGV7 314 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 CABLES2Q9BTV7 478 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 ZNF436Q9C0F3 470 aaPredicted RBP8.43□□□□□ -1.06
RNF4-216ENST00000511859 SRRQ9GZT4 340 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 EHFQ9NZC4 300 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 MTFP1Q9UDX5 166 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 ANAPC10Q9UM13 185 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 AGRNO00468 2067 aa8.43□□□□□ -1.06
RNF4-216ENST00000511859 TRBV6-7A0A0A0MS04 114 aa8.42□□□□□ -1.06
RNF4-216ENST00000511859 CTDSPLO15194 276 aa8.42□□□□□ -1.06
RNF4-216ENST00000511859 GSTZ1O43708 216 aaPredicted RBP8.42□□□□□ -1.06
RNF4-216ENST00000511859 CD3DP04234 171 aa8.42□□□□□ -1.06
RNF4-216ENST00000511859 NAT1P18440 290 aa8.42□□□□□ -1.06
RNF4-216ENST00000511859 HLA-DMBP28068 263 aa8.42□□□□□ -1.06
RNF4-216ENST00000511859 DUTP33316 252 aaKnown RBP8.42□□□□□ -1.06
RNF4-216ENST00000511859 MRPS10P82664 201 aaKnown RBP8.42□□□□□ -1.06
RNF4-216ENST00000511859 C10orf55Q5SWW7 151 aa8.42□□□□□ -1.06
RNF4-216ENST00000511859 FAAP20Q6NZ36 180 aa8.42□□□□□ -1.06
RNF4-216ENST00000511859 Q8N1X5 172 aa8.42□□□□□ -1.06
RNF4-216ENST00000511859 OR4D10Q8NGI6 311 aa8.42□□□□□ -1.06
RNF4-216ENST00000511859 SDHCQ99643 169 aaPredicted RBP8.42□□□□□ -1.06
RNF4-216ENST00000511859 DAZ1Q9NQZ3 744 aaKnown RBP8.42□□□□□ -1.06
RNF4-216ENST00000511859 RABL2AQ9UBK7 228 aaPredicted RBP8.42□□□□□ -1.06
RNF4-216ENST00000511859 RABL2BQ9UNT1 228 aa8.42□□□□□ -1.06
RNF4-216ENST00000511859 LINC00854A0A1B0GVQ3 168 aa8.41□□□□□ -1.06
RNF4-216ENST00000511859 IL6RP08887 468 aaPredicted RBP8.41□□□□□ -1.06
RNF4-216ENST00000511859 ZNF735P0CB33 412 aa8.41□□□□□ -1.06
RNF4-216ENST00000511859 DEFA4P12838 97 aa8.41□□□□□ -1.06
RNF4-216ENST00000511859 FCGR2CP31995 323 aa8.41□□□□□ -1.06
RNF4-216ENST00000511859 MAS1LP35410 378 aa8.41□□□□□ -1.06
RNF4-216ENST00000511859 RPL27AP46776 148 aaKnown RBP8.41□□□□□ -1.06
RNF4-216ENST00000511859 TAS2R46P59540 309 aa8.41□□□□□ -1.06
RNF4-216ENST00000511859 BAK1Q16611 211 aa8.41□□□□□ -1.06
RNF4-216ENST00000511859 C19orf35Q6ZS72 473 aa8.41□□□□□ -1.06
RNF4-216ENST00000511859 H1FOOQ8IZA3 346 aaPredicted RBP8.41□□□□□ -1.06
RNF4-216ENST00000511859 RBM7Q9Y580 266 aaKnown RBP8.41□□□□□ -1.06
RNF4-216ENST00000511859 IGLV11-55A0A075B6I3 123 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 IGKV1D-13A0A0B4J2D9 117 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 IGHV3-35A0A0C4DH35 117 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 C15orf61A6NNL5 157 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 LINC00473A8K010 186 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 E7EUB6 86 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 DIRAS3O95661 229 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 CA1P00915 261 aaPredicted RBP8.4□□□□□ -1.06
RNF4-216ENST00000511859 AMBPP02760 352 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 CTXN2P0C2S0 81 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 IGKV1-13P0DP09 117 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 PTBP1P26599 531 aaKnown RBP eCLIP8.4□□□□□ -1.06
RNF4-216ENST00000511859 GPR183P32249 361 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 FXYD4P59646 89 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 TSPAN5P62079 268 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 RNASE10Q5GAN6 216 aaKnown RBP8.4□□□□□ -1.06
RNF4-216ENST00000511859 STEAP1BQ6NZ63 245 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 Q6ZTC4 211 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 Q8NAQ8 132 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 TMEM229BQ8NBD8 167 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 VSTM2AQ8TAG5 236 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 S100ZQ8WXG8 99 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 TMEM190Q8WZ59 177 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 TRIM63Q969Q1 353 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 C5orf30Q96GV9 206 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 NDUFAF3Q9BU61 184 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 THYN1Q9P016 225 aa8.4□□□□□ -1.06
RNF4-216ENST00000511859 RBMX2Q9Y388 322 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms