RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 IGLV11-55A0A075B6I3 123 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 IGHV2-26A0A0B4J1V2 119 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 LEUTXA8MZ59 168 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 ANKRD65E5RJM6 399 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 OR2T1O43869 369 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 SERPINA1P01009 418 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 GCGP01275 180 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 SCTP09683 121 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 IGFBP3P17936 291 aaPredicted RBP2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 MYL9P24844 172 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 CD34P28906 385 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 KDELR2P33947 212 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 HRH1P35367 487 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 SERPINB8P50452 374 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 BLVRAP53004 296 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 OR2B8PP59922 312 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 KRTAP10-4P60372 401 aaPredicted RBP2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 PCBD1P61457 104 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 CTAG1AP78358 180 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 RPL18AQ02543 176 aaKnown RBP2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 MXD1Q05195 221 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 C2orf54Q08AI8 447 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 C2orf80Q0P641 193 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 KRTAP20-1Q3LI63 56 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 SPIN4Q56A73 249 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 LPCAT4Q643R3 524 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 LCN8Q6JVE9 175 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 ZNF826PQ6ZT77 177 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 LINC00173Q6ZV60 143 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 MRPL55Q7Z7F7 128 aaKnown RBP2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 OAFQ86UD1 273 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 CALHM1Q8IU99 346 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 SAXO1Q8IYX7 474 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 Q8N976 141 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 ZNF738Q8NE65 137 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 OR4P4Q8NGL7 312 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 OR10G4Q8NGN3 311 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 OR11H2Q8NH07 326 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 OR51A7Q8NH64 312 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 OR4A5Q8NH83 315 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 DYNLRB2Q8TF09 96 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 IFT81Q8WYA0 676 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 SLC7A6Q92536 515 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 GALNT14Q96FL9 552 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 SCGB3A2Q96PL1 93 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 SDF2Q99470 211 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 WFDC6Q9BQY6 131 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 C7orf50Q9BRJ6 194 aaKnown RBP2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 GABARAPL3Q9BY60 117 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 ABCG5Q9H222 651 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 IFI27L2Q9H2X8 130 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 TXNIPQ9H3M7 391 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 POPDC3Q9HBV1 291 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 SDHAF2Q9NX18 166 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 RHBDL2Q9NX52 303 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 IL20Q9NYY1 176 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 VPS29Q9UBQ0 182 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 CBY1Q9Y3M2 126 aa2.11□□□□□ -2.07
TOPBP1-208ENST00000511439 LPAP08519 4548 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 TRAV8-7A0A075B6U6 113 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 FAM183AA6NL82 134 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 C17orf98A8MV24 154 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 K7EMT4 169 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 ZNF593O00488 134 aaPredicted RBP2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 MAGEB4O15481 346 aaPredicted RBP2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 GLAP06280 429 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 COX5BP10606 129 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 GRPRP30550 384 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 GNRHRP30968 328 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 RBM34P42696 430 aaKnown RBP2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 HCCSP53701 268 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 UBE2G2P60604 165 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 MAGOHP61326 146 aaKnown RBP2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 COPZ1P61923 177 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 POU2AF1Q16633 256 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 AP1ARQ63HQ0 302 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 C5orf46Q6UWT4 87 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 C4orf22Q6V702 233 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 MRPL52Q86TS9 123 aaKnown RBP2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 CBLN2Q8IUK8 224 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 PCP2Q8IVA1 136 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 ZNF565Q8N9K5 539 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 CHST4Q8NCG5 386 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 OR5AK3PQ8NH89 298 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 ZNRF2Q8NHG8 242 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 OR51E1Q8TCB6 317 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 FAM3DQ96BQ1 224 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 SLC25A44Q96H78 314 aaPredicted RBP2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 SLC38A1Q9H2H9 487 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 TMBIM4Q9HC24 238 aa2.1□□□□□ -2.07
TOPBP1-208ENST00000511439 A0A087WUJ7 227 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 A0A0B4J2E0 115 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 GMNCA6NCL1 334 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 TVP23AA6NH52 213 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 NCBP2LA6PVI3 153 aaKnown RBP2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 SYCE1LA8MT33 242 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 OOSP1A8MZH6 123 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 CRXO43186 299 aaPredicted RBP2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 SGCEO43556 437 aa2.09□□□□□ -2.07
TOPBP1-208ENST00000511439 SLC16A7O60669 478 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms