RNA–Protein interactions for RNA: ENST00000508830.5

CAST-224, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-224ENST00000508830 KLF3P57682 345 aaPredicted RBP12.88□□□□□ -0.35
CAST-224ENST00000508830 OR9G1Q8NH87 305 aa12.88□□□□□ -0.35
CAST-224ENST00000508830 CMTM2Q8TAZ6 248 aa12.88□□□□□ -0.35
CAST-224ENST00000508830 IL36BQ9NZH7 164 aa12.88□□□□□ -0.35
CAST-224ENST00000508830 RPL29P47914 159 aaKnown RBP12.87□□□□□ -0.35
CAST-224ENST00000508830 DEFB109BQ30KR1 87 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 CENPWQ5EE01 88 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 OR8I2Q8N0Y5 310 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 FAM169BQ8N8A8 192 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 ZNF439Q8NDP4 499 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 ST6GALNAC3Q8NDV1 305 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 BEND2Q8NDZ0 799 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 NEUROG1Q92886 237 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 GCM1Q9NP62 436 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 TP53TG5Q9Y2B4 290 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 V9GYV3 84 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 GGTLC3B5MD39 225 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 ITGB1BP1O14713 200 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 LGALS4P56470 323 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 ERVFC1-1P60608 527 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 PQLC2Q6ZP29 291 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 MMD2Q8IY49 270 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 ZCCHC24Q8N2G6 241 aaKnown RBP12.87□□□□□ -0.35
CAST-224ENST00000508830 OR1L6Q8NGR2 347 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 C11orf52Q96A22 123 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 TBX15Q96SF7 602 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 NABP2Q9BQ15 211 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 ENY2Q9NPA8 101 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 ASCL3Q9NQ33 180 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 SVEP1Q4LDE5 3571 aa12.87□□□□□ -0.35
CAST-224ENST00000508830 DYSFO75923 2080 aa12.86□□□□□ -0.35
CAST-224ENST00000508830 J3QR06 171 aa12.86□□□□□ -0.35
CAST-224ENST00000508830 CT45A6P0DMU7 189 aa12.86□□□□□ -0.35
CAST-224ENST00000508830 CT45A5P0DMU8 189 aa12.86□□□□□ -0.35
CAST-224ENST00000508830 CT45A7P0DMV0 189 aa12.86□□□□□ -0.35
CAST-224ENST00000508830 TCL1AP56279 114 aa12.86□□□□□ -0.35
CAST-224ENST00000508830 RAB31Q13636 194 aa12.86□□□□□ -0.35
CAST-224ENST00000508830 LBHQ53QV2 105 aaPredicted RBP12.86□□□□□ -0.35
CAST-224ENST00000508830 DEFB124Q8NES8 71 aa12.86□□□□□ -0.35
CAST-224ENST00000508830 SLC45A2Q9UMX9 530 aa12.86□□□□□ -0.35
CAST-224ENST00000508830 ACACAQ13085 2346 aa12.86□□□□□ -0.35
CAST-224ENST00000508830 E7EUB6 86 aa12.86□□□□□ -0.35
CAST-224ENST00000508830 FCN1O00602 326 aa12.86□□□□□ -0.35
CAST-224ENST00000508830 IGHV3-48P01763 117 aa12.86□□□□□ -0.35
CAST-224ENST00000508830 KIAA1644Q3SXP7 199 aa12.86□□□□□ -0.35
CAST-224ENST00000508830 ZNF705FA8MVS1 300 aaPredicted RBP12.85□□□□□ -0.35
CAST-224ENST00000508830 SNURFLB1AK76 121 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 MT-CO2P00403 227 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 ZNF705DP0CH99 300 aaPredicted RBP12.85□□□□□ -0.35
CAST-224ENST00000508830 ZNF705BP0CI00 300 aaPredicted RBP12.85□□□□□ -0.35
CAST-224ENST00000508830 CRISP2P16562 243 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 SELENOTP62341 195 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 NHLRC2Q8NBF2 726 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.85□□□□□ -0.35
CAST-224ENST00000508830 GAFA1Q96PS6 74 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 FAM215AQ9Y5M1 114 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 POLEQ07864 2286 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 KIR2DL5BA0A0G2JN68 375 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 KIR2DL5BA0A0G2JPC4 375 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 C9JCJ5 164 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 OR7C2O60412 319 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 CA1P00915 261 aaPredicted RBP12.85□□□□□ -0.35
CAST-224ENST00000508830 OR10J1P30954 320 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 SSBP2P81877 361 aaPredicted RBP12.85□□□□□ -0.35
CAST-224ENST00000508830 C1orf194Q5T5A4 169 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 STUMQ69YW2 141 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 TOMM20LQ6UXN7 152 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 KIR2DL5AQ8N109 375 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 LINC00479Q96M42 142 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 HSPB9Q9BQS6 159 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 TMEM106BQ9NUM4 274 aa12.85□□□□□ -0.35
CAST-224ENST00000508830 ZFHX2Q9C0A1 2572 aaPredicted RBP12.84□□□□□ -0.35
CAST-224ENST00000508830 TRGV10A0A0A0MS01 117 aa12.84□□□□□ -0.35
CAST-224ENST00000508830 TRAV5A0A0B4J249 113 aa12.84□□□□□ -0.35
CAST-224ENST00000508830 REG1BP48304 166 aa12.84□□□□□ -0.35
CAST-224ENST00000508830 UHRF2Q96PU4 802 aa12.84□□□□□ -0.35
CAST-224ENST00000508830 PLEKHA3Q9HB20 300 aa12.84□□□□□ -0.35
CAST-224ENST00000508830 CUL9Q8IWT3 2517 aa12.84□□□□□ -0.35
CAST-224ENST00000508830 IGHV1-46P01743 117 aa12.84□□□□□ -0.35
CAST-224ENST00000508830 GLRXP35754 106 aa12.84□□□□□ -0.35
CAST-224ENST00000508830 TPTE2P1Q5T6R2 138 aa12.84□□□□□ -0.35
CAST-224ENST00000508830 NCOR1P1Q9H4R4 102 aa12.84□□□□□ -0.35
CAST-224ENST00000508830 ASH1LQ9NR48 2969 aaKnown RBP12.83□□□□□ -0.36
CAST-224ENST00000508830 TEX50A0A1B0GTY4 177 aa12.83□□□□□ -0.36
CAST-224ENST00000508830 MBD3L4A6NDZ8 208 aaPredicted RBP12.83□□□□□ -0.36
CAST-224ENST00000508830 MBD3L3A6NE82 208 aaPredicted RBP12.83□□□□□ -0.36
CAST-224ENST00000508830 MBD3L5A6NJ08 208 aaPredicted RBP12.83□□□□□ -0.36
CAST-224ENST00000508830 FCN3O75636 299 aa12.83□□□□□ -0.36
CAST-224ENST00000508830 SAA1P0DJI8 122 aaPredicted RBP12.83□□□□□ -0.36
CAST-224ENST00000508830 GNG4P50150 75 aa12.83□□□□□ -0.36
CAST-224ENST00000508830 FAM27E3Q08E93 113 aa12.83□□□□□ -0.36
CAST-224ENST00000508830 MBD3L2Q8NHZ7 208 aaPredicted RBP12.83□□□□□ -0.36
CAST-224ENST00000508830 RAB9BQ9NP90 201 aa12.83□□□□□ -0.36
CAST-224ENST00000508830 LY96Q9Y6Y9 160 aa12.83□□□□□ -0.36
CAST-224ENST00000508830 IGLV3-9A0A075B6K5 115 aa12.83□□□□□ -0.36
CAST-224ENST00000508830 TRAV9-1A0A075B6T8 112 aa12.83□□□□□ -0.36
CAST-224ENST00000508830 HELTA6NFD8 242 aa12.83□□□□□ -0.36
CAST-224ENST00000508830 AREGP15514 252 aa12.83□□□□□ -0.36
CAST-224ENST00000508830 NUTF2P61970 127 aaKnown RBP12.83□□□□□ -0.36
CAST-224ENST00000508830 SUMO1P63165 101 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms