RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 KCNK1O00180 336 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 GEMIN2O14893 280 aaKnown RBP0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 OR5F1O95221 314 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 SHBGP04278 402 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 UBBP0CG47 229 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 RPS4Y1P22090 263 aaKnown RBP0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 HIST1H2BOP23527 126 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 RPS12P25398 132 aaKnown RBP0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 HIST1H2BBP33778 126 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 ZNF80P51504 273 aaPredicted RBP0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 HIST1H2BDP58876 126 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 HIST1H2BCP62807 126 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 CCL20P78556 96 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 COTL1Q14019 142 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 ZNF345Q14585 488 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 HIST3H3Q16695 136 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 HIST2H2BEQ16778 126 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 SPANXN3Q5MJ09 141 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 C10orf55Q5SWW7 151 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 SYPL2Q5VXT5 272 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 LPCAT4Q643R3 524 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 RPL22L1Q6P5R6 122 aaKnown RBP0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 C10orf67Q8IYJ2 551 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 Q8N2B8 174 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 LRRC25Q8N386 305 aaPredicted RBP0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 TMEM156Q8N614 296 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 WFDC11Q8NEX6 87 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 OR5B17Q8NGF7 314 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 OR4C6Q8NH72 309 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 RASSF5Q8WWW0 418 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 HIST1H2BHQ93079 126 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 TMEM106AQ96A25 262 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 SCGB3A1Q96QR1 104 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 OR52E6Q96RD3 313 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 HIST1H2BNQ99877 126 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 HIST1H2BMQ99879 126 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 OR8D2Q9GZM6 311 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 TRABDQ9H4I3 376 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 CKLFQ9UBR5 152 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 BAIAP2Q9UQB8 552 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 LHFPL6Q9Y693 200 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 KIF24Q5T7B8 1368 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 TONSLQ96HA7 1378 aa0.4□□□□□ -2.35
HMGB1P29-201ENST00000505659 RIC1Q4ADV7 1423 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 SETD5Q9C0A6 1442 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 KIF13BQ9NQT8 1826 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 IGKV1-9A0A0C4DH69 117 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 TMEM212A6NML5 194 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 PSMD12O00232 456 aaPredicted RBP0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 HCRTO43612 131 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 CALB1P05937 261 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 HTR1AP08908 422 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 OR5G3P0C626 314 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 TCL1AP56279 114 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 PSME3P61289 254 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 SUPT4H1P63272 117 aaKnown RBP0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 RUNX1Q01196 453 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 SPANXN5Q5MJ07 72 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 CCDC122Q5T0U0 273 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 HIST2H3PS2Q5TEC6 136 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 TEX36Q5VZQ5 186 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 LPCAT3Q6P1A2 487 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 DPPA3Q6W0C5 159 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 Q6ZS49 121 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 DEFB128Q7Z7B8 93 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 ZNF565Q8N9K5 539 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 C9orf163Q8N9P6 203 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 OR4D11Q8NGI4 311 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 MRPL30Q8TCC3 161 aaKnown RBP0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 ODF3Q96PU9 254 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 LLPHQ9BRT6 129 aaKnown RBP0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 GINS4Q9BRT9 223 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 REG4Q9BYZ8 158 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 WDR61Q9GZS3 305 aaKnown RBP0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 OR51I1Q9H343 314 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 PRTFDC1Q9NRG1 225 aa0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 NCOA6Q14686 2063 aaPredicted RBP0.39□□□□□ -2.35
HMGB1P29-201ENST00000505659 TTC21AQ8NDW8 1320 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 A0A087WX48 190 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 A0A0D9SG52 128 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 EVPLLA8MZ36 301 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 EEF1E1-BLOC1S5C9J1V9 151 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 INMT-MINDY4F8WBC2 141 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 GOLGA6L19H0YKK7 550 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 M0R036 132 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 OR2B3O76000 313 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 IFNA10P01566 189 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 TNNC2P02585 160 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 CD79AP11912 226 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 COX6A1P12074 109 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 BRS3P32247 399 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 SPCS3P61009 180 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 UBE2IP63279 158 aaKnown RBP0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 PMAIP1Q13794 54 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 ZNF846Q147U1 533 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 GUK1Q16774 197 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 KHDC3LQ587J8 217 aa0.38□□□□□ -2.35
HMGB1P29-201ENST00000505659 AADACL3Q5VUY0 350 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms