RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 SLC45A2Q9UMX9 530 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 A0A0U1RQK1 487 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 ZNF320A2RRD8 509 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 FNDC10F2Z333 226 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 K7EN84 100 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 GATA2P23769 480 aaPredicted RBP8.02□□□□□ -1.13
CLIP1-204ENST00000501271 MLANAQ16655 118 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 SGMS2Q8NHU3 365 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 IMMP2LQ96T52 175 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 GAL3ST2Q9H3Q3 398 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 BET1LQ9NYM9 111 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 NAV3Q8IVL0 2385 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 PRRG2O14669 202 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 RNASE2P10153 161 aaKnown RBP8.02□□□□□ -1.13
CLIP1-204ENST00000501271 REG1BP48304 166 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 FOXL1Q12952 345 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 C2orf83Q53S99 150 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 DNLZQ5SXM8 178 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 TEX38Q6PEX7 206 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 PRSS33Q8NF86 280 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 C11orf52Q96A22 123 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 ABHD17AQ96GS6 310 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 HARBI1Q96MB7 349 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 ZNF714Q96N38 554 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 NABP2Q9BQ15 211 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 ELOVL5Q9NYP7 299 aa8.02□□□□□ -1.13
CLIP1-204ENST00000501271 H0YJW9 148 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 CHRNB4P30926 498 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 HLA-DRB5Q30154 266 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 TMEM200BQ69YZ2 307 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 Q8NA96 180 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 OR5B3Q8NH48 314 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 RNASEH2CQ8TDP1 164 aaKnown RBP8.01□□□□□ -1.13
CLIP1-204ENST00000501271 ZNF503Q96F45 646 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 SAP30LQ9HAJ7 183 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 SPTBN2O15020 2390 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 E7EUB6 86 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 MKRN2OSH3BPM6 223 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 MT-CO2P00403 227 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 GZMBP10144 247 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 OR10J1P30954 320 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 MEF2CQ06413 473 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-204ENST00000501271 DIAPH2-AS1Q14236 149 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 JOSD1Q15040 202 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-204ENST00000501271 PSG5Q15238 335 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 LYPD2Q6UXB3 125 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 OR10G8Q8NGN5 311 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 OR9G1Q8NH87 305 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 OSR1Q8TAX0 266 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-204ENST00000501271 TRAPPC1Q9Y5R8 145 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 APC2O95996 2303 aa8.01□□□□□ -1.13
CLIP1-204ENST00000501271 PPIAL4EA0A075B759 164 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 PPIAL4DF5H284 164 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 TMEM178BH3BS89 294 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 DVL1O14640 695 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 APOA2P02652 100 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 PPIAL4FP0DN26 164 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 CNN1P51911 297 aaKnown RBP8□□□□□ -1.13
CLIP1-204ENST00000501271 OR5AN1Q8NGI8 311 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 OR1L8Q8NGR8 309 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 OR5R1Q8NH85 324 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 H1FXQ92522 213 aaKnown RBP8□□□□□ -1.13
CLIP1-204ENST00000501271 CCL17Q92583 94 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 NDUFA4L2Q9NRX3 87 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 FKBP11Q9NYL4 201 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 PPIAL4AQ9Y536 164 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 A0A1B0GUS0 222 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 SLC17A3O00476 420 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 PLXNB1O43157 2135 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 AREGP15514 252 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 CD69Q07108 199 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 UHRF2Q96PU4 802 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 PRO1933Q9H354 126 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 CHODLQ9H9P2 273 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 JKAMPQ9P055 326 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 CTSZQ9UBR2 303 aa8□□□□□ -1.13
CLIP1-204ENST00000501271 C9JCJ5 164 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 RPL8P62917 257 aaKnown RBP7.99□□□□□ -1.13
CLIP1-204ENST00000501271 TMEM177Q53S58 311 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 C10orf55Q5SWW7 151 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 EAF1Q96JC9 268 aaPredicted RBP7.99□□□□□ -1.13
CLIP1-204ENST00000501271 SLC35E1Q96K37 410 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 WFIKKN1Q96NZ8 548 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 COMMD5Q9GZQ3 224 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 TMEM106BQ9NUM4 274 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 CGB1A6NKQ9 187 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 TNFRSF13BO14836 293 aaPredicted RBP7.99□□□□□ -1.13
CLIP1-204ENST00000501271 OR7C2O60412 319 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 OR5G3P0C626 314 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 OR10J4P0C629 311 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 CRYBB3P26998 211 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 SSBP2P81877 361 aaPredicted RBP7.99□□□□□ -1.13
CLIP1-204ENST00000501271 OR5I1Q13606 314 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 PRR30Q53SZ7 412 aaPredicted RBP7.99□□□□□ -1.13
CLIP1-204ENST00000501271 UNQ6494/PRO21346Q6UXR6 183 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 GFRALQ6UXV0 394 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 OR10X1Q8NGY0 326 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 OR2T6Q8NHC8 308 aa7.99□□□□□ -1.13
CLIP1-204ENST00000501271 FLYWCH2Q96CP2 140 aaKnown RBP7.99□□□□□ -1.13
CLIP1-204ENST00000501271 BTF3L4Q96K17 158 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms