RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, human

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-222	ENST00000495522	PRR20A	P86496	221 aa		12.5	□□□□□ -0.41
CALD1-222	ENST00000495522	LRRC10	Q5BKY1	277 aa		12.5	□□□□□ -0.41
CALD1-222	ENST00000495522	PYY3	Q5JQD4	70 aa		12.5	□□□□□ -0.41
CALD1-222	ENST00000495522	H1FX	Q92522	213 aa	Known RBP	12.5	□□□□□ -0.41
CALD1-222	ENST00000495522	WFIKKN1	Q96NZ8	548 aa		12.5	□□□□□ -0.41
CALD1-222	ENST00000495522	ELOVL1	Q9BW60	279 aa		12.5	□□□□□ -0.41
CALD1-222	ENST00000495522	PPP5D1	E7EU14	171 aa		12.5	□□□□□ -0.41
CALD1-222	ENST00000495522	CD99	P14209	185 aa		12.5	□□□□□ -0.41
CALD1-222	ENST00000495522	C2orf83	Q53S99	150 aa		12.5	□□□□□ -0.41
CALD1-222	ENST00000495522	HIST3H2BB	Q8N257	126 aa		12.5	□□□□□ -0.41
CALD1-222	ENST00000495522	OR5T1	Q8NG75	326 aa		12.5	□□□□□ -0.41
CALD1-222	ENST00000495522	RNASE6	Q93091	150 aa	Known RBP	12.5	□□□□□ -0.41
CALD1-222	ENST00000495522	HARBI1	Q96MB7	349 aa		12.5	□□□□□ -0.41
CALD1-222	ENST00000495522		H0YJW9	148 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	TNFRSF13B	O14836	293 aa	Predicted RBP	12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	MT-CO2	P00403	227 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	SOD3	P08294	240 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	NUTF2	P61970	127 aa	Known RBP	12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	RBPJ	Q06330	500 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	PRR30	Q53SZ7	412 aa	Predicted RBP	12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	SPATA31B1P	Q5VZV4	182 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	TMEM144	Q7Z5S9	345 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	OR4X1	Q8NH49	305 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	DERL1	Q9BUN8	251 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	SEPSECS	Q9HD40	501 aa	Known RBP	12.49	□□□□□ -0.41
CALD1-222	ENST00000495522		A0A1W2PPQ1	181 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	GGCT	O75223	188 aa	Known RBP	12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	COTL1	Q14019	142 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	TMEM177	Q53S58	311 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	FAM71F2	Q6NXP2	309 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	KCNIP4	Q6PIL6	250 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	OR5AN1	Q8NGI8	311 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	OR1L8	Q8NGR8	309 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	OR10X1	Q8NGY0	326 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	OR2T10	Q8NGZ9	312 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	PCGF1	Q9BSM1	259 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	DYNLRB1	Q9NP97	96 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	SLC45A2	Q9UMX9	530 aa		12.49	□□□□□ -0.41
CALD1-222	ENST00000495522	MAP1B	P46821	2468 aa	Known RBP	12.48	□□□□□ -0.41
CALD1-222	ENST00000495522	ACACA	Q13085	2346 aa		12.48	□□□□□ -0.41
CALD1-222	ENST00000495522	SHISA9	B4DS77	424 aa		12.48	□□□□□ -0.41
CALD1-222	ENST00000495522	LINC00869	P0C866	280 aa		12.48	□□□□□ -0.41
CALD1-222	ENST00000495522	GFI1B	Q5VTD9	330 aa		12.48	□□□□□ -0.41
CALD1-222	ENST00000495522	LYPD2	Q6UXB3	125 aa		12.48	□□□□□ -0.41
CALD1-222	ENST00000495522	C8orf31	Q8N9H6	132 aa		12.48	□□□□□ -0.41
CALD1-222	ENST00000495522	TMEM204	Q9BSN7	226 aa		12.48	□□□□□ -0.41
CALD1-222	ENST00000495522	PITPNC1	Q9UKF7	332 aa		12.48	□□□□□ -0.41
CALD1-222	ENST00000495522	YTHDF2	Q9Y5A9	579 aa	Known RBP	12.48	□□□□□ -0.41
CALD1-222	ENST00000495522		A0A087X0M5	115 aa		12.47	□□□□□ -0.41
CALD1-222	ENST00000495522		A0A1B0GX30	115 aa		12.47	□□□□□ -0.41
CALD1-222	ENST00000495522		K7ENP7	123 aa		12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	CHRNA7	P36544	502 aa		12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	FAM3B	P58499	235 aa	Predicted RBP	12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	TGIF2LX	Q8IUE1	241 aa		12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	LINC00311	Q8N616	119 aa		12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	ZNF596	Q8TC21	504 aa		12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	FLYWCH2	Q96CP2	140 aa	Known RBP	12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	GPR61	Q9BZJ8	451 aa		12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	COMMD5	Q9GZQ3	224 aa		12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	SCO2	A0A1W2PP80	73 aa		12.47	□□□□□ -0.41
CALD1-222	ENST00000495522		E7EQL1	145 aa		12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	DVL1	O14640	695 aa		12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	RNASE2	P10153	161 aa	Known RBP	12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	REG1B	P48304	166 aa		12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	RPL8	P62917	257 aa	Known RBP	12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	OR4P4	Q8NGL7	312 aa		12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	TMEM186	Q96B77	213 aa		12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	FAM122A	Q96E09	287 aa		12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	SLC35E1	Q96K37	410 aa		12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	NDUFA4L2	Q9NRX3	87 aa		12.47	□□□□□ -0.41
CALD1-222	ENST00000495522	TYMS	P04818	313 aa		12.46	□□□□□ -0.41
CALD1-222	ENST00000495522	USF1	P22415	310 aa	Predicted RBP	12.46	□□□□□ -0.41
CALD1-222	ENST00000495522	CHRNB4	P30926	498 aa		12.46	□□□□□ -0.41
CALD1-222	ENST00000495522	CLEC12B	Q2HXU8	276 aa		12.46	□□□□□ -0.41
CALD1-222	ENST00000495522	PDZD11	Q5EBL8	140 aa		12.46	□□□□□ -0.41
CALD1-222	ENST00000495522	FAM78B	Q5VT40	261 aa		12.46	□□□□□ -0.41
CALD1-222	ENST00000495522	PDPN	Q86YL7	162 aa		12.46	□□□□□ -0.41
CALD1-222	ENST00000495522	OR10D4P	Q8NGN7	298 aa		12.46	□□□□□ -0.41
CALD1-222	ENST00000495522	OR4C13	Q8NGP0	309 aa		12.46	□□□□□ -0.41
CALD1-222	ENST00000495522	OR4A5	Q8NH83	315 aa		12.46	□□□□□ -0.41
CALD1-222	ENST00000495522	NABP2	Q9BQ15	211 aa		12.46	□□□□□ -0.41
CALD1-222	ENST00000495522	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	12.46	□□□□□ -0.41
CALD1-222	ENST00000495522	KAAG1	Q9UBP8	84 aa		12.46	□□□□□ -0.41
CALD1-222	ENST00000495522	CTSZ	Q9UBR2	303 aa		12.46	□□□□□ -0.41
CALD1-222	ENST00000495522	FUT9	Q9Y231	359 aa		12.46	□□□□□ -0.41
CALD1-222	ENST00000495522	MSRB2	Q9Y3D2	182 aa		12.46	□□□□□ -0.41
CALD1-222	ENST00000495522	FOXH1	O75593	365 aa		12.46	□□□□□ -0.42
CALD1-222	ENST00000495522	APC2	O95996	2303 aa		12.46	□□□□□ -0.42
CALD1-222	ENST00000495522	LOX	P28300	417 aa	Predicted RBP	12.46	□□□□□ -0.42
CALD1-222	ENST00000495522	GAMT	Q14353	236 aa		12.46	□□□□□ -0.42
CALD1-222	ENST00000495522	MOB3B	Q86TA1	216 aa		12.46	□□□□□ -0.42
CALD1-222	ENST00000495522	ZNF114	Q8NC26	417 aa		12.46	□□□□□ -0.42
CALD1-222	ENST00000495522	OR10W1	Q8NGF6	305 aa		12.46	□□□□□ -0.42
CALD1-222	ENST00000495522	VSTM2A	Q8TAG5	236 aa		12.46	□□□□□ -0.42
CALD1-222	ENST00000495522	MISP3	Q96FF7	219 aa		12.46	□□□□□ -0.42
CALD1-222	ENST00000495522	IMMP2L	Q96T52	175 aa		12.46	□□□□□ -0.42
CALD1-222	ENST00000495522	ARL2-SNX15	V9GYD0	113 aa		12.46	□□□□□ -0.42
CALD1-222	ENST00000495522	DMXL2	Q8TDJ6	3036 aa		12.45	□□□□□ -0.42
CALD1-222	ENST00000495522	TRBV20OR9-2	A0A075B6H5	130 aa		12.45	□□□□□ -0.42
CALD1-222	ENST00000495522	IGKV1OR2-108	A0A075B7D4	117 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms