RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	PSENEN	Q9NZ42	101 aa		10.68	□□□□□ -0.7
APTX-231	ENST00000494973	SH2D7	A6NKC9	451 aa	Predicted RBP	10.67	□□□□□ -0.7
APTX-231	ENST00000494973	CGB1	A6NKQ9	187 aa		10.67	□□□□□ -0.7
APTX-231	ENST00000494973	OR8U8	P0C7N1	319 aa		10.67	□□□□□ -0.7
APTX-231	ENST00000494973	IAPP	P10997	89 aa		10.67	□□□□□ -0.7
APTX-231	ENST00000494973	MYOD1	P15172	320 aa		10.67	□□□□□ -0.7
APTX-231	ENST00000494973	CTRB1	P17538	263 aa		10.67	□□□□□ -0.7
APTX-231	ENST00000494973	CAV2	P51636	162 aa		10.67	□□□□□ -0.7
APTX-231	ENST00000494973	WT1-AS	Q06250	92 aa		10.67	□□□□□ -0.7
APTX-231	ENST00000494973	BAX	Q07812	192 aa		10.67	□□□□□ -0.7
APTX-231	ENST00000494973	EXOSC2	Q13868	293 aa	Known RBP	10.67	□□□□□ -0.7
APTX-231	ENST00000494973	C2orf83	Q53S99	150 aa		10.67	□□□□□ -0.7
APTX-231	ENST00000494973	CTRB2	Q6GPI1	263 aa		10.67	□□□□□ -0.7
APTX-231	ENST00000494973		Q6ZSV7	163 aa		10.67	□□□□□ -0.7
APTX-231	ENST00000494973	DCUN1D4	Q92564	292 aa		10.67	□□□□□ -0.7
APTX-231	ENST00000494973	FAM103A1	Q9BTL3	118 aa	Known RBP	10.67	□□□□□ -0.7
APTX-231	ENST00000494973	SLA2	Q9H6Q3	261 aa		10.67	□□□□□ -0.7
APTX-231	ENST00000494973	MBD2	Q9UBB5	411 aa		10.67	□□□□□ -0.7
APTX-231	ENST00000494973	F11R	Q9Y624	299 aa	Known RBP	10.67	□□□□□ -0.7
APTX-231	ENST00000494973	SVEP1	Q4LDE5	3571 aa		10.67	□□□□□ -0.7
APTX-231	ENST00000494973	TET2	Q6N021	2002 aa	Predicted RBP	10.67	□□□□□ -0.7
APTX-231	ENST00000494973	PLXNB1	O43157	2135 aa		10.66	□□□□□ -0.7
APTX-231	ENST00000494973	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.66	□□□□□ -0.7
APTX-231	ENST00000494973		E7EUB6	86 aa		10.66	□□□□□ -0.7
APTX-231	ENST00000494973	FBXO24	O75426	580 aa		10.66	□□□□□ -0.7
APTX-231	ENST00000494973	C1QB	P02746	253 aa		10.66	□□□□□ -0.7
APTX-231	ENST00000494973	EGR2	P11161	476 aa	Predicted RBP	10.66	□□□□□ -0.7
APTX-231	ENST00000494973	HBG1	P69891	147 aa		10.66	□□□□□ -0.7
APTX-231	ENST00000494973	HBG2	P69892	147 aa		10.66	□□□□□ -0.7
APTX-231	ENST00000494973	BSX	Q3C1V8	233 aa		10.66	□□□□□ -0.7
APTX-231	ENST00000494973	SPINK9	Q5DT21	86 aa		10.66	□□□□□ -0.7
APTX-231	ENST00000494973	TMEM65	Q6PI78	240 aa		10.66	□□□□□ -0.7
APTX-231	ENST00000494973	INO80E	Q8NBZ0	244 aa	Predicted RBP	10.66	□□□□□ -0.7
APTX-231	ENST00000494973	OR10W1	Q8NGF6	305 aa		10.66	□□□□□ -0.7
APTX-231	ENST00000494973	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.66	□□□□□ -0.7
APTX-231	ENST00000494973	WDR89	Q96FK6	387 aa	Predicted RBP	10.66	□□□□□ -0.7
APTX-231	ENST00000494973	HYLS1	Q96M11	299 aa		10.66	□□□□□ -0.7
APTX-231	ENST00000494973	FBXO7	Q9Y3I1	522 aa		10.66	□□□□□ -0.7
APTX-231	ENST00000494973	FXYD6-FXYD2	A0A087WZ82	144 aa		10.65	□□□□□ -0.7
APTX-231	ENST00000494973		A0A1B0GW64	132 aa		10.65	□□□□□ -0.7
APTX-231	ENST00000494973	PSMB11	A5LHX3	300 aa		10.65	□□□□□ -0.7
APTX-231	ENST00000494973	HKR1	P10072	659 aa		10.65	□□□□□ -0.7
APTX-231	ENST00000494973	RNASE2	P10153	161 aa	Known RBP	10.65	□□□□□ -0.7
APTX-231	ENST00000494973	AREG	P15514	252 aa		10.65	□□□□□ -0.7
APTX-231	ENST00000494973	ZFP69	Q49AA0	526 aa		10.65	□□□□□ -0.7
APTX-231	ENST00000494973	C19orf54	Q5BKX5	351 aa		10.65	□□□□□ -0.7
APTX-231	ENST00000494973	FAM209B	Q5JX69	171 aa		10.65	□□□□□ -0.7
APTX-231	ENST00000494973	SPANXN5	Q5MJ07	72 aa		10.65	□□□□□ -0.7
APTX-231	ENST00000494973	ETFRF1	Q6IPR1	90 aa		10.65	□□□□□ -0.7
APTX-231	ENST00000494973	TEX38	Q6PEX7	206 aa		10.65	□□□□□ -0.7
APTX-231	ENST00000494973	PINX1	Q96BK5	328 aa	Known RBP	10.65	□□□□□ -0.7
APTX-231	ENST00000494973	PPP1R14B	Q96C90	147 aa		10.65	□□□□□ -0.7
APTX-231	ENST00000494973	P2RX4	Q99571	388 aa		10.65	□□□□□ -0.7
APTX-231	ENST00000494973	ZC4H2	Q9NQZ6	224 aa		10.65	□□□□□ -0.7
APTX-231	ENST00000494973	TRAV14DV4	A0A0A6YYC5	116 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	FAM223B	A6NKX1	122 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	HMSD	A8MTL9	139 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	SCGB2A1	O75556	95 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	IFNA4	P05014	189 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	ELANE	P08246	267 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	SULT1A1	P50225	295 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	FOXL1	Q12952	345 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	KLK9	Q2XQG4	91 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	ASPHD1	Q5U4P2	390 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	TMEM14EP	Q6UXP3	125 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	ZNF546	Q86UE3	836 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	FAM223A	Q8IWN6	122 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	OR10P1	Q8NGE3	313 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	OR4X2	Q8NGF9	303 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	NEURL2	Q9BR09	285 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	WNT10A	Q9GZT5	417 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	C11orf1	Q9H5F2	150 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	OR5AC2	Q9NZP5	309 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	KLK9	Q9UKQ9	250 aa		10.64	□□□□□ -0.71
APTX-231	ENST00000494973	PAIP2B	Q9ULR5	123 aa	Known RBP	10.64	□□□□□ -0.71
APTX-231	ENST00000494973		A0A0G2JLM5	398 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	CLPSL1	A2RUU4	121 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	C15orf62	A8K5M9	175 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973		G3V318	75 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973		H0YIZ8	118 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973		H3BP45	60 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	IGHG4	P01861	327 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	C4BPB	P20851	252 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	RPL12	P30050	165 aa	Known RBP	10.63	□□□□□ -0.71
APTX-231	ENST00000494973	PPIF	P30405	207 aa	Known RBP	10.63	□□□□□ -0.71
APTX-231	ENST00000494973	PAX9	P55771	341 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	CFHR3	Q02985	330 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	FOXE3	Q13461	319 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	ZNF345	Q14585	488 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	PVRIG	Q6DKI7	326 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	SLC25A24	Q6NUK1	477 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	ETV3L	Q6ZN32	361 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	CENPV	Q7Z7K6	275 aa	Predicted RBP	10.63	□□□□□ -0.71
APTX-231	ENST00000494973	TMEM252	Q8N6L7	170 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	NECAP1	Q8NC96	275 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	CACNG8	Q8WXS5	425 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	USMG5	Q96IX5	58 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	CXorf58	Q96LI9	332 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	AQP10	Q96PS8	301 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	RNF126	Q9BV68	326 aa		10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms