RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 C9orf139Q6ZV77 190 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 MRPL21Q7Z2W9 205 aaKnown RBP6.68□□□□□ -1.34
HDAC6-234ENST00000493923 LYPD6Q86Y78 171 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 FAM90A1Q86YD7 464 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 GCSAMQ8N6F7 178 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 GVQW1Q8N7I0 195 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 CSNK2A3Q8NEV1 391 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 OR8B3Q8NGG8 313 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 OR10AC1Q8NH08 325 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 TMEM37Q8WXS4 190 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 PINX1Q96BK5 328 aaKnown RBP6.68□□□□□ -1.34
HDAC6-234ENST00000493923 GPR146Q96CH1 333 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 OR8B2Q96RD0 313 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 JMJD8Q96S16 334 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 SMIM7Q9BQ49 75 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 PSMG3Q9BT73 122 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-234ENST00000493923 ZNF747Q9BV97 191 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 SH3BGRL3Q9H299 93 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 KCNK15Q9H427 330 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 NAA60Q9H7X0 242 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 ZFAND3Q9H8U3 227 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 TNFRSF19Q9NS68 423 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 CENPMQ9NSP4 180 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 RCL1Q9Y2P8 373 aaKnown RBP6.68□□□□□ -1.34
HDAC6-234ENST00000493923 KLHDC2Q9Y2U9 406 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 TRAPPC1Q9Y5R8 145 aa6.68□□□□□ -1.34
HDAC6-234ENST00000493923 TRBV9A0A0B4J1U6 114 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 SERPINE3A8MV23 424 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.67□□□□□ -1.34
HDAC6-234ENST00000493923 IFNL4K9M1U5 179 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 HOXA3O43365 443 aaPredicted RBP6.67□□□□□ -1.34
HDAC6-234ENST00000493923 GYPAP02724 150 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 GRPP07492 148 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 RNASE1P07998 156 aaKnown RBP6.67□□□□□ -1.34
HDAC6-234ENST00000493923 ZNF823P16415 610 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 LORP23490 312 aaPredicted RBP6.67□□□□□ -1.34
HDAC6-234ENST00000493923 UCP1P25874 307 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 CFHR2P36980 270 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 FGF8P55075 233 aaPredicted RBP6.67□□□□□ -1.34
HDAC6-234ENST00000493923 CCL20P78556 96 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 MSMO1Q15800 293 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 ADIRFQ15847 76 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 ABCA11PQ4W5N1 156 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 SPATA45Q537H7 98 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 LRRC10Q5BKY1 277 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 ZNF880Q6PDB4 577 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 DPY19L4Q7Z388 723 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 NIT1Q86X76 327 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 TEX29Q8N6K0 151 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 OR51A4Q8NGJ6 313 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 OR5D18Q8NGL1 313 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 OR4S2Q8NH73 311 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 REEP6Q96HR9 211 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 ATP5SQ99766 215 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 LPAR5Q9H1C0 372 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 ZMAT3Q9HA38 289 aaKnown RBP6.67□□□□□ -1.34
HDAC6-234ENST00000493923 MANBALQ9NQG1 85 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 GNG13Q9P2W3 67 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 RNF7Q9UBF6 113 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 CLN8Q9UBY8 286 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 PAM16Q9Y3D7 125 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 PXMP4Q9Y6I8 212 aa6.67□□□□□ -1.34
HDAC6-234ENST00000493923 IGHV2-26A0A0B4J1V2 119 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 CENPVL3A0A0U1RRI6 287 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 hCG_38984A0A1B0GV85 526 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 LRRC30A6NM36 301 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 ADAM20O43506 726 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 FSTL3O95633 263 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 NRASP01111 189 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 KRASP01116 189 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 LHBP01229 141 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 H2BFMP0C1H6 154 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 IGLC2P0DOY2 106 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 IGLC3P0DOY3 106 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 GNB3P16520 340 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 GLRA1P23415 457 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 CTRLP40313 264 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 TFPI2P48307 235 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 YPEL3P61236 119 aaPredicted RBP6.66□□□□□ -1.34
HDAC6-234ENST00000493923 RPL15P61313 204 aaKnown RBP6.66□□□□□ -1.34
HDAC6-234ENST00000493923 SERF2P84101 59 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 Q0VG73 95 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 FOXL1Q12952 345 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 MALLQ13021 153 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 DMRTC1Q5HYR2 192 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 C19orf35Q6ZS72 473 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 FAM57BQ71RH2 274 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 LINC00528Q8N1L1 170 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 STPG4Q8N801 248 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 OR11L1Q8NGX0 322 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 SPTSSAQ969W0 71 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 SPSB4Q96A44 273 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 LYZL4Q96KX0 146 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 TMEM56Q96MV1 263 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 SIRPDQ9H106 197 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 HSF4Q9ULV5 492 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 RHBDD3Q9Y3P4 386 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 TMEM56-RWDD3S4R434 201 aa6.66□□□□□ -1.34
HDAC6-234ENST00000493923 SAA2-SAA4A0A096LPE2 208 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 A0A1B0GV50 99 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms