RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 NUP35Q8NFH5 326 aa9.65□□□□□ -0.87
HDAC4-210ENST00000493582 TAAR6Q96RI8 345 aa9.65□□□□□ -0.87
HDAC4-210ENST00000493582 PMCHL2Q9BQD1 86 aa9.65□□□□□ -0.87
HDAC4-210ENST00000493582 FNDC4Q9H6D8 234 aaPredicted RBP9.65□□□□□ -0.87
HDAC4-210ENST00000493582 MPC1Q9Y5U8 109 aa9.65□□□□□ -0.87
HDAC4-210ENST00000493582 GAGE10A6NGK3 116 aa9.64□□□□□ -0.87
HDAC4-210ENST00000493582 SYS1-DBNDD2H3BUS1 97 aa9.64□□□□□ -0.87
HDAC4-210ENST00000493582 CD5LO43866 347 aa9.64□□□□□ -0.87
HDAC4-210ENST00000493582 P04436 131 aa9.64□□□□□ -0.87
HDAC4-210ENST00000493582 VDAC2P45880 294 aaPredicted RBP9.64□□□□□ -0.87
HDAC4-210ENST00000493582 CHRDL1Q9BU40 450 aa9.64□□□□□ -0.87
HDAC4-210ENST00000493582 PKIBQ9C010 78 aa9.64□□□□□ -0.87
HDAC4-210ENST00000493582 COMMD5Q9GZQ3 224 aa9.64□□□□□ -0.87
HDAC4-210ENST00000493582 EPOPA6NHQ4 379 aa9.64□□□□□ -0.87
HDAC4-210ENST00000493582 DNPH1O43598 174 aa9.64□□□□□ -0.87
HDAC4-210ENST00000493582 ARR3P36575 388 aa9.64□□□□□ -0.87
HDAC4-210ENST00000493582 TMPRSS3P57727 454 aa9.64□□□□□ -0.87
HDAC4-210ENST00000493582 SRYQ05066 204 aa9.64□□□□□ -0.87
HDAC4-210ENST00000493582 FAM120AOSQ5T036 256 aa9.64□□□□□ -0.87
HDAC4-210ENST00000493582 OR1B1Q8NGR6 318 aa9.64□□□□□ -0.87
HDAC4-210ENST00000493582 ZNF503Q96F45 646 aa9.64□□□□□ -0.87
HDAC4-210ENST00000493582 PLEKHA3Q9HB20 300 aa9.64□□□□□ -0.87
HDAC4-210ENST00000493582 C7orf71A4D174 169 aa9.63□□□□□ -0.87
HDAC4-210ENST00000493582 PPIAL4DF5H284 164 aa9.63□□□□□ -0.87
HDAC4-210ENST00000493582 IGHV3-13P01766 116 aa9.63□□□□□ -0.87
HDAC4-210ENST00000493582 IGHV3-7P01780 117 aa9.63□□□□□ -0.87
HDAC4-210ENST00000493582 FOXF2Q12947 444 aa9.63□□□□□ -0.87
HDAC4-210ENST00000493582 TRAT1Q6PIZ9 186 aa9.63□□□□□ -0.87
HDAC4-210ENST00000493582 NAA38Q9BRA0 125 aaKnown RBP9.63□□□□□ -0.87
HDAC4-210ENST00000493582 PEF1Q9UBV8 284 aaKnown RBP9.63□□□□□ -0.87
HDAC4-210ENST00000493582 TET2Q6N021 2002 aaPredicted RBP9.63□□□□□ -0.87
HDAC4-210ENST00000493582 FAM231BA6NCW3 169 aa9.63□□□□□ -0.87
HDAC4-210ENST00000493582 SS18L1O75177 396 aaPredicted RBP9.63□□□□□ -0.87
HDAC4-210ENST00000493582 PPOXP50336 477 aa9.63□□□□□ -0.87
HDAC4-210ENST00000493582 KLF5Q13887 457 aaPredicted RBP9.63□□□□□ -0.87
HDAC4-210ENST00000493582 SVIPQ8NHG7 77 aa9.63□□□□□ -0.87
HDAC4-210ENST00000493582 Q8TCH9 128 aa9.63□□□□□ -0.87
HDAC4-210ENST00000493582 TRIB1Q96RU8 372 aa9.63□□□□□ -0.87
HDAC4-210ENST00000493582 TIMM8BQ9Y5J9 83 aaPredicted RBP9.63□□□□□ -0.87
HDAC4-210ENST00000493582 NCKAP5O14513 1909 aa9.63□□□□□ -0.87
HDAC4-210ENST00000493582 PROP1O75360 226 aa9.63□□□□□ -0.87
HDAC4-210ENST00000493582 GRPP07492 148 aa9.63□□□□□ -0.87
HDAC4-210ENST00000493582 NXPH1P58417 271 aa9.63□□□□□ -0.87
HDAC4-210ENST00000493582 SMIM21Q3B7S5 101 aa9.63□□□□□ -0.87
HDAC4-210ENST00000493582 RPS19BP1Q86WX3 136 aaKnown RBP9.63□□□□□ -0.87
HDAC4-210ENST00000493582 IGF2BP2-AS1Q96M15 143 aa9.63□□□□□ -0.87
HDAC4-210ENST00000493582 VWC2LB2RUY7 222 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 C21orf140B9A014 251 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 ERVK11-1P61568 191 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 MOB3BQ86TA1 216 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 ZNF835Q9Y2P0 537 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 TMEM30CPA0ZSE6 113 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 G3V4G9 280 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 WNT9BO14905 357 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 CRXO43186 299 aaPredicted RBP9.62□□□□□ -0.87
HDAC4-210ENST00000493582 HAND1O96004 215 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 MT-CO3P00414 261 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 UQCRFS1P47985 274 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 PAX2Q02962 417 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 Q6ZR03 302 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 SSX8Q7RTT4 187 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 S100A7AQ86SG5 101 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 CXorf67Q86X51 503 aaPredicted RBP9.62□□□□□ -0.87
HDAC4-210ENST00000493582 TUSC5Q8IXB3 177 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 SNRNP40Q96DI7 357 aaKnown RBP9.62□□□□□ -0.87
HDAC4-210ENST00000493582 NABP2Q9BQ15 211 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 DCTN5Q9BTE1 182 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 SCRT2Q9NQ03 307 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 TMEM167BQ9NRX6 74 aa9.62□□□□□ -0.87
HDAC4-210ENST00000493582 IGHV1-45A0A0A0MS14 117 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 IGHV1-24A0A0C4DH33 117 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 HIGD1CA8MV81 97 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 LEPROTL1O95214 131 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 CER1O95813 267 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 PRR20EP86478 221 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 PRR20CP86479 221 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 PRR20DP86480 221 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 PRR20BP86481 221 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 PRR20AP86496 221 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 RAB31Q13636 194 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 ZNF146Q15072 292 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 SLC25A40Q8TBP6 338 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 WIPF2Q8TF74 440 aaPredicted RBP9.61□□□□□ -0.87
HDAC4-210ENST00000493582 J3QR06 171 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 GPR183P32249 361 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 MRPL14Q6P1L8 145 aaKnown RBP9.61□□□□□ -0.87
HDAC4-210ENST00000493582 IMMP1LQ96LU5 166 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 DUSP13Q9UII6 198 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 OOEPA6NGQ2 149 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 APOA2P02652 100 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 ZNF138P52744 262 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 PLP2Q04941 152 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 ALKBH6Q3KRA9 238 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 SLC35E4Q6ICL7 350 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 OR1N2Q8NGR9 330 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 HINT2Q9BX68 163 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 TCF19Q9Y242 345 aa9.61□□□□□ -0.87
HDAC4-210ENST00000493582 MYOD1P15172 320 aa9.6□□□□□ -0.87
HDAC4-210ENST00000493582 DUTP33316 252 aaKnown RBP9.6□□□□□ -0.87
HDAC4-210ENST00000493582 MRPL49Q13405 166 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms