RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 DERL1Q9BUN8 251 aa1.05□□□□□ -2.24
CD46-216ENST00000490278 GUCA1BQ9UMX6 200 aa1.05□□□□□ -2.24
CD46-216ENST00000490278 BRWD1Q9NSI6 2320 aa1.05□□□□□ -2.24
CD46-216ENST00000490278 CLPSP04118 112 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 HIST1H2BOP23527 126 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 HIST1H2BBP33778 126 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 NKX2-5P52952 324 aaPredicted RBP1.04□□□□□ -2.24
CD46-216ENST00000490278 HIST1H2BDP58876 126 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 HIST1H2BCP62807 126 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 STX5Q13190 355 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 OR2F1Q13607 317 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 KISS1Q15726 138 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 HIST2H2BEQ16778 126 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.04□□□□□ -2.24
CD46-216ENST00000490278 CCDC122Q5T0U0 273 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 RPL22L1Q6P5R6 122 aaKnown RBP1.04□□□□□ -2.24
CD46-216ENST00000490278 AAED1Q7RTV5 226 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 IQCF2Q8IXL9 164 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 TMEM86BQ8N661 226 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 WFDC11Q8NEX6 87 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 MCFD2Q8NI22 146 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 MRPL30Q8TCC3 161 aaKnown RBP1.04□□□□□ -2.24
CD46-216ENST00000490278 HIST1H2BHQ93079 126 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 TMEM106AQ96A25 262 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 HIST1H2BNQ99877 126 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 HIST1H2BMQ99879 126 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 COL6A6A6NMZ7 2263 aa1.04□□□□□ -2.24
CD46-216ENST00000490278 RALGAPA2Q2PPJ7 1873 aa1.03□□□□□ -2.24
CD46-216ENST00000490278 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.03□□□□□ -2.24
CD46-216ENST00000490278 TMEM212A6NML5 194 aa1.03□□□□□ -2.24
CD46-216ENST00000490278 SPCS3P61009 180 aa1.03□□□□□ -2.24
CD46-216ENST00000490278 RUNX1Q01196 453 aa1.03□□□□□ -2.24
CD46-216ENST00000490278 C10orf55Q5SWW7 151 aa1.03□□□□□ -2.24
CD46-216ENST00000490278 C8orf74Q6P047 294 aa1.03□□□□□ -2.24
CD46-216ENST00000490278 LRRC25Q8N386 305 aaPredicted RBP1.03□□□□□ -2.24
CD46-216ENST00000490278 IMP4Q96G21 291 aaKnown RBP1.03□□□□□ -2.24
CD46-216ENST00000490278 OR52E6Q96RD3 313 aa1.03□□□□□ -2.24
CD46-216ENST00000490278 SERPINI1Q99574 410 aa1.03□□□□□ -2.24
CD46-216ENST00000490278 CMTM6Q9NX76 183 aa1.03□□□□□ -2.24
CD46-216ENST00000490278 TTC21AQ8NDW8 1320 aa1.03□□□□□ -2.24
CD46-216ENST00000490278 TENM1Q9UKZ4 2725 aa1.03□□□□□ -2.24
CD46-216ENST00000490278 MAST2Q6P0Q8 1798 aa1.03□□□□□ -2.24
CD46-216ENST00000490278 KMT2BQ9UMN6 2715 aaPredicted RBP1.02□□□□□ -2.25
CD46-216ENST00000490278 TGIF2-C20orf24A0A0A6YYL0 155 aa1.02□□□□□ -2.25
CD46-216ENST00000490278 M0R036 132 aa1.02□□□□□ -2.25
CD46-216ENST00000490278 PSMD12O00232 456 aaPredicted RBP1.02□□□□□ -2.25
CD46-216ENST00000490278 HCRTO43612 131 aa1.02□□□□□ -2.25
CD46-216ENST00000490278 IGKV1-5P01602 117 aa1.02□□□□□ -2.25
CD46-216ENST00000490278 CD79AP11912 226 aa1.02□□□□□ -2.25
CD46-216ENST00000490278 HBA1P69905 142 aa1.02□□□□□ -2.25
CD46-216ENST00000490278 PLCXD2Q0VAA5 305 aa1.02□□□□□ -2.25
CD46-216ENST00000490278 ZNF846Q147U1 533 aa1.02□□□□□ -2.25
CD46-216ENST00000490278 SPANXN3Q5MJ09 141 aa1.02□□□□□ -2.25
CD46-216ENST00000490278 SNAPC4Q5SXM2 1469 aa1.02□□□□□ -2.25
CD46-216ENST00000490278 LCN15Q6UWW0 184 aa1.02□□□□□ -2.25
CD46-216ENST00000490278 C20orf196Q8IYI0 205 aa1.02□□□□□ -2.25
CD46-216ENST00000490278 SCGB3A1Q96QR1 104 aa1.02□□□□□ -2.25
CD46-216ENST00000490278 REG4Q9BYZ8 158 aa1.02□□□□□ -2.25
CD46-216ENST00000490278 PRTFDC1Q9NRG1 225 aa1.02□□□□□ -2.25
CD46-216ENST00000490278 MYOFQ9NZM1 2061 aa1.02□□□□□ -2.25
CD46-216ENST00000490278 CKLFQ9UBR5 152 aa1.02□□□□□ -2.25
CD46-216ENST00000490278 HEATR5AQ86XA9 2040 aa1.01□□□□□ -2.25
CD46-216ENST00000490278 IGKV2D-26A0A0A0MRZ7 120 aa1.01□□□□□ -2.25
CD46-216ENST00000490278 FUOMA2VDF0 154 aa1.01□□□□□ -2.25
CD46-216ENST00000490278 AHSA1O95433 338 aa1.01□□□□□ -2.25
CD46-216ENST00000490278 HLA-DRB1P01911 266 aa1.01□□□□□ -2.25
CD46-216ENST00000490278 HIST1H1TP22492 207 aaPredicted RBP1.01□□□□□ -2.25
CD46-216ENST00000490278 SULT1A1P50225 295 aa1.01□□□□□ -2.25
CD46-216ENST00000490278 PSME3P61289 254 aa1.01□□□□□ -2.25
CD46-216ENST00000490278 CDK10Q15131 360 aa1.01□□□□□ -2.25
CD46-216ENST00000490278 C12orf29Q8N999 325 aa1.01□□□□□ -2.25
CD46-216ENST00000490278 OR13C4Q8NGS5 318 aa1.01□□□□□ -2.25
CD46-216ENST00000490278 ARL5BQ96KC2 179 aa1.01□□□□□ -2.25
CD46-216ENST00000490278 COMMD5Q9GZQ3 224 aa1.01□□□□□ -2.25
CD46-216ENST00000490278 FBXL12Q9NXK8 326 aa1.01□□□□□ -2.25
CD46-216ENST00000490278 OR5AC2Q9NZP5 309 aa1.01□□□□□ -2.25
CD46-216ENST00000490278 TP73-AS1Q9UF72 201 aa1.01□□□□□ -2.25
CD46-216ENST00000490278 INTS1Q8N201 2190 aaKnown RBP1.01□□□□□ -2.25
CD46-216ENST00000490278 TRAV14DV4A0A0A6YYC5 116 aa1□□□□□ -2.25
CD46-216ENST00000490278 SMIM23A6NLE4 172 aa1□□□□□ -2.25
CD46-216ENST00000490278 NIPSNAP2O75323 286 aa1□□□□□ -2.25
CD46-216ENST00000490278 OR5F1O95221 314 aa1□□□□□ -2.25
CD46-216ENST00000490278 SHBGP04278 402 aa1□□□□□ -2.25
CD46-216ENST00000490278 IFNA16P05015 189 aa1□□□□□ -2.25
CD46-216ENST00000490278 HTR1AP08908 422 aa1□□□□□ -2.25
CD46-216ENST00000490278 SNRPD2P62316 118 aaKnown RBP1□□□□□ -2.25
CD46-216ENST00000490278 IMPG1Q17R60 797 aa1□□□□□ -2.25
CD46-216ENST00000490278 ACOT6Q3I5F7 207 aaPredicted RBP1□□□□□ -2.25
CD46-216ENST00000490278 PTRHD1Q6GMV3 140 aaKnown RBP1□□□□□ -2.25
CD46-216ENST00000490278 LPCAT3Q6P1A2 487 aa1□□□□□ -2.25
CD46-216ENST00000490278 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1□□□□□ -2.25
CD46-216ENST00000490278 ZNF826PQ6ZT77 177 aa1□□□□□ -2.25
CD46-216ENST00000490278 BPIFA4PQ86YQ2 179 aa1□□□□□ -2.25
CD46-216ENST00000490278 LINC00471Q8N535 108 aa1□□□□□ -2.25
CD46-216ENST00000490278 ZNF565Q8N9K5 539 aa1□□□□□ -2.25
CD46-216ENST00000490278 PFN4Q8NHR9 129 aa1□□□□□ -2.25
CD46-216ENST00000490278 PPP1R2P1Q96PQ5 205 aa1□□□□□ -2.25
CD46-216ENST00000490278 NIPSNAP1Q9BPW8 284 aa1□□□□□ -2.25
CD46-216ENST00000490278 GINS4Q9BRT9 223 aa1□□□□□ -2.25
CD46-216ENST00000490278 NOSIPQ9Y314 301 aaKnown RBP1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms