RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, human

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-C-208	ENST00000487245	VKORC1	Q9BQB6	163 aa		21.28	■■□□□ 1
HLA-C-208	ENST00000487245	SCNM1	Q9BWG6	230 aa		21.28	■■□□□ 1
HLA-C-208	ENST00000487245	ZFHX4	Q86UP3	3567 aa		21.27	■■□□□ 1
HLA-C-208	ENST00000487245	C2orf83	Q53S99	150 aa		21.27	■■□□□ 1
HLA-C-208	ENST00000487245	ZCCHC24	Q8N2G6	241 aa	Known RBP	21.27	■■□□□ 1
HLA-C-208	ENST00000487245	C8orf31	Q8N9H6	132 aa		21.27	■■□□□ 1
HLA-C-208	ENST00000487245	SLC35E1	Q96K37	410 aa		21.27	■■□□□ 1
HLA-C-208	ENST00000487245	UHRF2	Q96PU4	802 aa		21.27	■■□□□ 1
HLA-C-208	ENST00000487245	DMXL1	Q9Y485	3027 aa		21.27	■■□□□ 1
HLA-C-208	ENST00000487245	ZGRF1	Q86YA3	2104 aa		21.27	■■□□□ 1
HLA-C-208	ENST00000487245		A0A0U1RQK1	487 aa		21.26	■□□□□ 0.99
HLA-C-208	ENST00000487245	ZNF320	A2RRD8	509 aa		21.26	■□□□□ 0.99
HLA-C-208	ENST00000487245	RD3L	P0DJH9	198 aa		21.26	■□□□□ 0.99
HLA-C-208	ENST00000487245	IGFBP2	P18065	325 aa		21.26	■□□□□ 0.99
HLA-C-208	ENST00000487245	CNN1	P51911	297 aa	Known RBP	21.26	■□□□□ 0.99
HLA-C-208	ENST00000487245	DEFA6	Q01524	100 aa		21.26	■□□□□ 0.99
HLA-C-208	ENST00000487245	SPATA31B1P	Q5VZV4	182 aa		21.26	■□□□□ 0.99
HLA-C-208	ENST00000487245	TMEM200B	Q69YZ2	307 aa		21.26	■□□□□ 0.99
HLA-C-208	ENST00000487245	FAM71F2	Q6NXP2	309 aa		21.26	■□□□□ 0.99
HLA-C-208	ENST00000487245	TEX38	Q6PEX7	206 aa		21.26	■□□□□ 0.99
HLA-C-208	ENST00000487245	PNKD	Q8N490	385 aa		21.26	■□□□□ 0.99
HLA-C-208	ENST00000487245	GZMB	P10144	247 aa		21.26	■□□□□ 0.99
HLA-C-208	ENST00000487245	OR10G8	Q8NGN5	311 aa		21.26	■□□□□ 0.99
HLA-C-208	ENST00000487245	OR5B3	Q8NH48	314 aa		21.26	■□□□□ 0.99
HLA-C-208	ENST00000487245	OCC1	Q8TAD7	63 aa		21.26	■□□□□ 0.99
HLA-C-208	ENST00000487245	CCL17	Q92583	94 aa		21.26	■□□□□ 0.99
HLA-C-208	ENST00000487245	DYNLRB1	Q9NP97	96 aa		21.26	■□□□□ 0.99
HLA-C-208	ENST00000487245	SHISA9	B4DS77	424 aa		21.25	■□□□□ 0.99
HLA-C-208	ENST00000487245	TSTD3	H0UI37	97 aa		21.25	■□□□□ 0.99
HLA-C-208	ENST00000487245	YPEL3	P61236	119 aa	Predicted RBP	21.25	■□□□□ 0.99
HLA-C-208	ENST00000487245	LINC00311	Q8N616	119 aa		21.25	■□□□□ 0.99
HLA-C-208	ENST00000487245	SGMS2	Q8NHU3	365 aa		21.25	■□□□□ 0.99
HLA-C-208	ENST00000487245	TMEM18	Q96B42	140 aa		21.25	■□□□□ 0.99
HLA-C-208	ENST00000487245	C19orf24	Q9BVV8	132 aa		21.25	■□□□□ 0.99
HLA-C-208	ENST00000487245	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	21.25	■□□□□ 0.99
HLA-C-208	ENST00000487245	DSP	P15924	2871 aa	Known RBP	21.25	■□□□□ 0.99
HLA-C-208	ENST00000487245	ICE1	Q9Y2F5	2266 aa		21.25	■□□□□ 0.99
HLA-C-208	ENST00000487245	PGPEP1L	A6NFU8	196 aa		21.24	■□□□□ 0.99
HLA-C-208	ENST00000487245	OR1L8	Q8NGR8	309 aa		21.24	■□□□□ 0.99
HLA-C-208	ENST00000487245	HINT2	Q9BX68	163 aa		21.24	■□□□□ 0.99
HLA-C-208	ENST00000487245	KAAG1	Q9UBP8	84 aa		21.24	■□□□□ 0.99
HLA-C-208	ENST00000487245	TRAPPC1	Q9Y5R8	145 aa		21.24	■□□□□ 0.99
HLA-C-208	ENST00000487245	TEX50	A0A1B0GTY4	177 aa		21.24	■□□□□ 0.99
HLA-C-208	ENST00000487245	DLL1	O00548	723 aa		21.24	■□□□□ 0.99
HLA-C-208	ENST00000487245	MYOD1	P15172	320 aa		21.24	■□□□□ 0.99
HLA-C-208	ENST00000487245	NHLH1	Q02575	133 aa		21.24	■□□□□ 0.99
HLA-C-208	ENST00000487245	PRR30	Q53SZ7	412 aa	Predicted RBP	21.24	■□□□□ 0.99
HLA-C-208	ENST00000487245	ZNF596	Q8TC21	504 aa		21.24	■□□□□ 0.99
HLA-C-208	ENST00000487245	TMEM167B	Q9NRX6	74 aa		21.24	■□□□□ 0.99
HLA-C-208	ENST00000487245	SRRM4	A7MD48	611 aa	Known RBP	21.23	■□□□□ 0.99
HLA-C-208	ENST00000487245		E7EQL1	145 aa		21.23	■□□□□ 0.99
HLA-C-208	ENST00000487245	IGKV1-16	P04430	117 aa		21.23	■□□□□ 0.99
HLA-C-208	ENST00000487245	OR5AN1	Q8NGI8	311 aa		21.23	■□□□□ 0.99
HLA-C-208	ENST00000487245	OR4P4	Q8NGL7	312 aa		21.23	■□□□□ 0.99
HLA-C-208	ENST00000487245	H1FX	Q92522	213 aa	Known RBP	21.23	■□□□□ 0.99
HLA-C-208	ENST00000487245	INS-IGF2	F8WCM5	200 aa		21.22	■□□□□ 0.99
HLA-C-208	ENST00000487245	CCL3L1	P16619	93 aa		21.22	■□□□□ 0.99
HLA-C-208	ENST00000487245	SSX2	Q16385	188 aa		21.22	■□□□□ 0.99
HLA-C-208	ENST00000487245	TMEM177	Q53S58	311 aa		21.22	■□□□□ 0.99
HLA-C-208	ENST00000487245	TMEM186	Q96B77	213 aa		21.22	■□□□□ 0.99
HLA-C-208	ENST00000487245	MRPL20	Q9BYC9	149 aa	Known RBP	21.22	■□□□□ 0.99
HLA-C-208	ENST00000487245	YLPM1	P49750	1951 aa	Known RBP	21.22	■□□□□ 0.99
HLA-C-208	ENST00000487245	FOXH1	O75593	365 aa		21.22	■□□□□ 0.99
HLA-C-208	ENST00000487245	APOBEC3A	P31941	199 aa	Predicted RBP	21.22	■□□□□ 0.99
HLA-C-208	ENST00000487245	GPX4	P36969	197 aa	Predicted RBP	21.22	■□□□□ 0.99
HLA-C-208	ENST00000487245	GBGT1	Q8N5D6	347 aa		21.22	■□□□□ 0.99
HLA-C-208	ENST00000487245	NABP2	Q9BQ15	211 aa		21.22	■□□□□ 0.99
HLA-C-208	ENST00000487245	IL36B	Q9NZH7	164 aa		21.22	■□□□□ 0.99
HLA-C-208	ENST00000487245	CEP250	Q9BV73	2442 aa		21.21	■□□□□ 0.99
HLA-C-208	ENST00000487245		H0YJW9	148 aa		21.21	■□□□□ 0.99
HLA-C-208	ENST00000487245	SAA1	P0DJI8	122 aa	Predicted RBP	21.21	■□□□□ 0.99
HLA-C-208	ENST00000487245	MIR17HG	Q75NE6	70 aa		21.21	■□□□□ 0.99
HLA-C-208	ENST00000487245	REC114	Q7Z4M0	266 aa		21.21	■□□□□ 0.99
HLA-C-208	ENST00000487245	DMRTC2	Q8IXT2	367 aa	Predicted RBP	21.21	■□□□□ 0.99
HLA-C-208	ENST00000487245	OR4A5	Q8NH83	315 aa		21.21	■□□□□ 0.99
HLA-C-208	ENST00000487245	TECR	Q9NZ01	308 aa	Known RBP	21.21	■□□□□ 0.99
HLA-C-208	ENST00000487245	GVINP1	Q7Z2Y8	2422 aa		21.21	■□□□□ 0.99
HLA-C-208	ENST00000487245		B9A039	149 aa		21.2	■□□□□ 0.98
HLA-C-208	ENST00000487245	FCN3	O75636	299 aa		21.2	■□□□□ 0.98
HLA-C-208	ENST00000487245	RNASE2	P10153	161 aa	Known RBP	21.2	■□□□□ 0.98
HLA-C-208	ENST00000487245	DDT	P30046	118 aa		21.2	■□□□□ 0.98
HLA-C-208	ENST00000487245	CASP6	P55212	293 aa		21.2	■□□□□ 0.98
HLA-C-208	ENST00000487245	ZNRD1	Q9P1U0	126 aa		21.2	■□□□□ 0.98
HLA-C-208	ENST00000487245	CD3E	P07766	207 aa		21.2	■□□□□ 0.98
HLA-C-208	ENST00000487245	OR5G3	P0C626	314 aa		21.2	■□□□□ 0.98
HLA-C-208	ENST00000487245	LYPD2	Q6UXB3	125 aa		21.2	■□□□□ 0.98
HLA-C-208	ENST00000487245	OR10X1	Q8NGY0	326 aa		21.2	■□□□□ 0.98
HLA-C-208	ENST00000487245	EAF1	Q96JC9	268 aa	Predicted RBP	21.2	■□□□□ 0.98
HLA-C-208	ENST00000487245	HARBI1	Q96MB7	349 aa		21.2	■□□□□ 0.98
HLA-C-208	ENST00000487245		K7EN84	100 aa		21.19	■□□□□ 0.98
HLA-C-208	ENST00000487245	PQLC2	Q6ZP29	291 aa		21.19	■□□□□ 0.98
HLA-C-208	ENST00000487245	PDPN	Q86YL7	162 aa		21.19	■□□□□ 0.98
HLA-C-208	ENST00000487245	VSTM2A	Q8TAG5	236 aa		21.19	■□□□□ 0.98
HLA-C-208	ENST00000487245	FLYWCH2	Q96CP2	140 aa	Known RBP	21.19	■□□□□ 0.98
HLA-C-208	ENST00000487245	C14orf144	Q96I85	54 aa		21.19	■□□□□ 0.98
HLA-C-208	ENST00000487245	AKAP13	Q12802	2813 aa		21.19	■□□□□ 0.98
HLA-C-208	ENST00000487245	PRSS8	Q16651	343 aa		21.18	■□□□□ 0.98
HLA-C-208	ENST00000487245	CACNG8	Q8WXS5	425 aa		21.18	■□□□□ 0.98
HLA-C-208	ENST00000487245	MSRB2	Q9Y3D2	182 aa		21.18	■□□□□ 0.98
HLA-C-208	ENST00000487245	USF1	P22415	310 aa	Predicted RBP	21.18	■□□□□ 0.98

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