RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 SAC3D1A6NKF1 404 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 ST8SIA3O43173 380 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 FCGR3BO75015 233 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 OXTP01178 125 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 CD3GP09693 182 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 DNAH10OSP0CZ25 163 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 GNB3P16520 340 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 LINC00315P59091 139 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 ERVFC1-1P60608 527 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 DAD1P61803 113 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 MS4A2Q01362 244 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 TMED1Q13445 227 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 OXA1LQ15070 435 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 PIK3CD-AS1Q5SR53 167 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 OR2G6Q5TZ20 316 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 ZNF880Q6PDB4 577 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 SPSB3Q6PJ21 355 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 MOB1BQ7L9L4 216 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 LRRTM1Q86UE6 522 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 LHFPL3Q86UP9 236 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 ACBD7Q8N6N7 88 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 GPR148Q8TDV2 347 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 DNAJC9Q8WXX5 260 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 HDHD3Q9BSH5 251 aaPredicted RBP3.67□□□□□ -1.82
PTPN4-210ENST00000485247 CTDSP1Q9GZU7 261 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 OR51E2Q9H255 320 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 Q9H3A6 140 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 AAMDCQ9H7C9 122 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 THYN1Q9P016 225 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 HSF4Q9ULV5 492 aa3.67□□□□□ -1.82
PTPN4-210ENST00000485247 LRP1Q07954 4544 aaKnown RBP3.66□□□□□ -1.82
PTPN4-210ENST00000485247 TEX48A0A1B0GUV7 120 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 J3QRE1 110 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 KBTBD11O94819 623 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 APOHP02749 345 aaPredicted RBP3.66□□□□□ -1.82
PTPN4-210ENST00000485247 EIF4EP06730 217 aaKnown RBP3.66□□□□□ -1.82
PTPN4-210ENST00000485247 ZNF688P0C7X2 276 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 IGFBP3P17936 291 aaPredicted RBP3.66□□□□□ -1.82
PTPN4-210ENST00000485247 CRHBPP24387 322 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 PRDX6P30041 224 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 DUTP33316 252 aaKnown RBP3.66□□□□□ -1.82
PTPN4-210ENST00000485247 GTF2A1P52655 376 aaPredicted RBP3.66□□□□□ -1.82
PTPN4-210ENST00000485247 CLINT1Q14677 625 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 Q56UQ5 140 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 OR2B11Q5JQS5 317 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 OR10K2Q6IF99 312 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 SLC25A24Q6NUK1 477 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 ZNF705AQ6ZN79 300 aaPredicted RBP3.66□□□□□ -1.82
PTPN4-210ENST00000485247 Q6ZRN7 208 aaPredicted RBP3.66□□□□□ -1.82
PTPN4-210ENST00000485247 DUSP18Q8NEJ0 188 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 OR8J1Q8NGP2 316 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 VSTM2AQ8TAG5 236 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 VN1R17PQ8TDU5 208 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 ADTRPQ96IZ2 230 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 UHRF2Q96PU4 802 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 RAB40CQ96S21 281 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 C1QTNF4Q9BXJ3 329 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 RIMS4Q9H426 269 aaPredicted RBP3.66□□□□□ -1.82
PTPN4-210ENST00000485247 FNDC4Q9H6D8 234 aaPredicted RBP3.66□□□□□ -1.82
PTPN4-210ENST00000485247 Q9N2K0 584 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 IMPAD1Q9NX62 359 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 ZNF586Q9NXT0 402 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 C21orf62Q9NYP8 219 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 RBM7Q9Y580 266 aaKnown RBP3.66□□□□□ -1.82
PTPN4-210ENST00000485247 YTHDF2Q9Y5A9 579 aaKnown RBP3.66□□□□□ -1.82
PTPN4-210ENST00000485247 RFNGQ9Y644 331 aa3.66□□□□□ -1.82
PTPN4-210ENST00000485247 TRAV8-7A0A075B6U6 113 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 TRBV6-6A0A0A6YYG2 114 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 TRAV2A0A0B4J234 112 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 A0A1W2PPK0 400 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 SMIM9A6NGZ8 99 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 ZNF705FA8MVS1 300 aaPredicted RBP3.65□□□□□ -1.83
PTPN4-210ENST00000485247 F5H768 121 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 J3KRW8 73 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 K7EQG2 157 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 BET1O15155 118 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 DCTN3O75935 186 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 CD5P06127 495 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 CTSGP08311 255 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 P0C879 139 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 ZNF705DP0CH99 300 aaPredicted RBP3.65□□□□□ -1.83
PTPN4-210ENST00000485247 ZNF705BP0CI00 300 aaPredicted RBP3.65□□□□□ -1.83
PTPN4-210ENST00000485247 HTR2CP28335 458 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 POLR2IP36954 125 aaKnown RBP3.65□□□□□ -1.83
PTPN4-210ENST00000485247 GBX2P52951 348 aaPredicted RBP3.65□□□□□ -1.83
PTPN4-210ENST00000485247 NUTF2P61970 127 aaKnown RBP3.65□□□□□ -1.83
PTPN4-210ENST00000485247 VAMP2P63027 116 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 ARFRP1Q13795 201 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 TMEM69Q5SWH9 247 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 XAF1Q6GPH4 301 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 SYS1Q8N2H4 156 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 CBR4Q8N4T8 237 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 STXBP6Q8NFX7 210 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 TMEM167AQ8TBQ9 72 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 CANT1Q8WVQ1 401 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 DGCR14Q96DF8 476 aaKnown RBP3.65□□□□□ -1.83
PTPN4-210ENST00000485247 MRPL48Q96GC5 212 aaKnown RBP3.65□□□□□ -1.83
PTPN4-210ENST00000485247 ZNF479Q96JC4 524 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 OR10C1Q96KK4 312 aa3.65□□□□□ -1.83
PTPN4-210ENST00000485247 PLEKHJ1Q9NW61 149 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms