RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 CD5LO43866 347 aa3□□□□□ -1.93
VPS41-212ENST00000482217 COX7A2P2O60397 106 aa3□□□□□ -1.93
VPS41-212ENST00000482217 TRGC2P03986 189 aa3□□□□□ -1.93
VPS41-212ENST00000482217 ATP6V0CP27449 155 aa3□□□□□ -1.93
VPS41-212ENST00000482217 S100A2P29034 98 aa3□□□□□ -1.93
VPS41-212ENST00000482217 RBMXP38159 391 aaKnown RBP3□□□□□ -1.93
VPS41-212ENST00000482217 FOXA3P55318 350 aaPredicted RBP3□□□□□ -1.93
VPS41-212ENST00000482217 GABARAPL2P60520 117 aa3□□□□□ -1.93
VPS41-212ENST00000482217 DIAPH2-AS1Q14236 149 aa3□□□□□ -1.93
VPS41-212ENST00000482217 PDGFRLQ15198 375 aa3□□□□□ -1.93
VPS41-212ENST00000482217 MSMO1Q15800 293 aa3□□□□□ -1.93
VPS41-212ENST00000482217 CEMP1Q6PRD7 247 aaPredicted RBP3□□□□□ -1.93
VPS41-212ENST00000482217 GTF2H5Q6ZYL4 71 aa3□□□□□ -1.93
VPS41-212ENST00000482217 RPP25LQ8N5L8 163 aaKnown RBP3□□□□□ -1.93
VPS41-212ENST00000482217 TEX29Q8N6K0 151 aa3□□□□□ -1.93
VPS41-212ENST00000482217 PLPP5Q8NEB5 264 aa3□□□□□ -1.93
VPS41-212ENST00000482217 OR5D14Q8NGL3 314 aa3□□□□□ -1.93
VPS41-212ENST00000482217 OR5C1Q8NGR4 320 aa3□□□□□ -1.93
VPS41-212ENST00000482217 OR2A5Q96R48 311 aa3□□□□□ -1.93
VPS41-212ENST00000482217 OPRPNQ99935 248 aaPredicted RBP3□□□□□ -1.93
VPS41-212ENST00000482217 DERL1Q9BUN8 251 aa3□□□□□ -1.93
VPS41-212ENST00000482217 GGTLC1Q9BX51 225 aa3□□□□□ -1.93
VPS41-212ENST00000482217 SLC25A2Q9BXI2 301 aa3□□□□□ -1.93
VPS41-212ENST00000482217 OCR1Q9BZK8 76 aa3□□□□□ -1.93
VPS41-212ENST00000482217 PARP12Q9H0J9 701 aaKnown RBP3□□□□□ -1.93
VPS41-212ENST00000482217 Q9H521 79 aa3□□□□□ -1.93
VPS41-212ENST00000482217 SND1-IT1Q9HBX3 110 aa3□□□□□ -1.93
VPS41-212ENST00000482217 V9GYS6 101 aa3□□□□□ -1.93
VPS41-212ENST00000482217 TCOF1Q13428 1488 aaKnown RBP3□□□□□ -1.93
VPS41-212ENST00000482217 TNS2Q63HR2 1409 aa3□□□□□ -1.93
VPS41-212ENST00000482217 QRICH2Q9H0J4 1663 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 TRBV20OR9-2A0A075B6H5 130 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 IGHV7-81A0A0B4J1V7 117 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 ZNF705GA8MUZ8 300 aaPredicted RBP2.99□□□□□ -1.93
VPS41-212ENST00000482217 OR2T1O43869 369 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 CD14P08571 375 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 NFYBP25208 207 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 IMPA1P29218 277 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 OPRM1P35372 400 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 ZNF80P51504 273 aaPredicted RBP2.99□□□□□ -1.93
VPS41-212ENST00000482217 MRGPRG-AS1Q2M3A8 158 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 TCEAL5Q5H9L2 206 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 FAM74A1Q5RGS3 127 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 C9orf66Q5T8R8 295 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 ZNF709Q8N972 641 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 LINC01555Q8NAE3 123 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 OR4S1Q8NGB4 309 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 OR2T10Q8NGZ9 312 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 STAG3L4Q8TBR4 150 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 MRPL30Q8TCC3 161 aaKnown RBP2.99□□□□□ -1.93
VPS41-212ENST00000482217 RAB2BQ8WUD1 216 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 BRK1Q8WUW1 75 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 RNASE6Q93091 150 aaKnown RBP2.99□□□□□ -1.93
VPS41-212ENST00000482217 ABHD14BQ96IU4 210 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 ZNF184Q99676 751 aaPredicted RBP2.99□□□□□ -1.93
VPS41-212ENST00000482217 PLEKHF2Q9H8W4 249 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 DHRS4-AS1Q9P1J3 65 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 ZNF492Q9P255 531 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 MARCOQ9UEW3 520 aaPredicted RBP2.99□□□□□ -1.93
VPS41-212ENST00000482217 LAMTOR3Q9UHA4 124 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 PTPRTO14522 1441 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 MYOM3Q5VTT5 1437 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 MAST2Q6P0Q8 1798 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 CARMIL3Q8ND23 1372 aa2.99□□□□□ -1.93
VPS41-212ENST00000482217 DSCAMO60469 2012 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 PARP14Q460N5 1801 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 DOCK8Q8NF50 2099 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 DSCAML1Q8TD84 2053 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 IGLV7-46A0A075B6I9 117 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 TRAV9-1A0A075B6T8 112 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 IGHV4-30-2A0A087WSY4 118 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 TMEM72A0PK05 275 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 CD300LBA8K4G0 201 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 FNDC10F2Z333 226 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 KRTAP4-16G5E9R7 235 aaPredicted RBP2.98□□□□□ -1.93
VPS41-212ENST00000482217 M0R378 163 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 NTN3O00634 580 aaPredicted RBP2.98□□□□□ -1.93
VPS41-212ENST00000482217 IGLV3-27P01718 113 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 LINC00869P0C866 280 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 CRHBPP24387 322 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 INPP1P49441 399 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 CATR1Q13166 79 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 KRTAP27-1Q3LI81 207 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 PRR30Q53SZ7 412 aaPredicted RBP2.98□□□□□ -1.93
VPS41-212ENST00000482217 C1orf140Q5VVS0 124 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 LCN15Q6UWW0 184 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 TRAPPC6BQ86SZ2 158 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 ZNF555Q8NEP9 628 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 NUP37Q8NFH4 326 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 PPTC7Q8NI37 304 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 RBPMSQ93062 196 aaKnown RBP2.98□□□□□ -1.93
VPS41-212ENST00000482217 YPEL4Q96NS1 127 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 SPIN2AQ99865 258 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 SPIN2BQ9BPZ2 258 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 POLR2J2Q9GZM3 115 aaKnown RBP2.98□□□□□ -1.93
VPS41-212ENST00000482217 POLR2J3Q9H1A7 115 aaKnown RBP2.98□□□□□ -1.93
VPS41-212ENST00000482217 ZNF443Q9Y2A4 671 aaPredicted RBP2.98□□□□□ -1.93
VPS41-212ENST00000482217 ADAMTS13Q76LX8 1427 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 ABCA3Q99758 1704 aa2.98□□□□□ -1.93
VPS41-212ENST00000482217 CHD3Q12873 2000 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms