RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 ADCY9O60503 1353 aa0.93□□□□□ -2.26
LTN1-204ENST00000475344 DLG5Q8TDM6 1919 aa0.93□□□□□ -2.26
LTN1-204ENST00000475344 TECTAO75443 2155 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 A0A0J9YY10 115 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 A0A1B0GX78 115 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 GGT3PA6NGU5 568 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 FABP5P3A8MUU1 101 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 EEF1E1-BLOC1S5C9J1V9 151 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 PRM2P04554 102 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 HIST1H1EP10412 219 aaKnown RBP0.92□□□□□ -2.26
LTN1-204ENST00000475344 ZNF80P51504 273 aaPredicted RBP0.92□□□□□ -2.26
LTN1-204ENST00000475344 STX5Q13190 355 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 KISS1Q15726 138 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 HIST2H3PS2Q5TEC6 136 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 SYPL2Q5VXT5 272 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 LPCAT4Q643R3 524 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 C1orf158Q8N1D5 194 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 C11orf40Q8WZ69 217 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 SLC35B4Q969S0 331 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 ARL5BQ96KC2 179 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 MRPS26Q9BYN8 205 aaKnown RBP0.92□□□□□ -2.26
LTN1-204ENST00000475344 YIPF3Q9GZM5 350 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 EFCAB1Q9HAE3 211 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 KIF24Q5T7B8 1368 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 TONSLQ96HA7 1378 aa0.92□□□□□ -2.26
LTN1-204ENST00000475344 ANAPC1Q9H1A4 1944 aa0.91□□□□□ -2.26
LTN1-204ENST00000475344 SCN10AQ9Y5Y9 1956 aa0.91□□□□□ -2.26
LTN1-204ENST00000475344 TRBV20OR9-2A0A075B6H5 130 aa0.91□□□□□ -2.26
LTN1-204ENST00000475344 TNNC2P02585 160 aa0.91□□□□□ -2.26
LTN1-204ENST00000475344 IFITM2Q01629 132 aa0.91□□□□□ -2.26
LTN1-204ENST00000475344 OR2F1Q13607 317 aa0.91□□□□□ -2.26
LTN1-204ENST00000475344 GRK1Q15835 563 aa0.91□□□□□ -2.26
LTN1-204ENST00000475344 Q8N2B8 174 aa0.91□□□□□ -2.26
LTN1-204ENST00000475344 BAIAP2Q9UQB8 552 aa0.91□□□□□ -2.26
LTN1-204ENST00000475344 PKIGQ9Y2B9 76 aa0.91□□□□□ -2.26
LTN1-204ENST00000475344 SCN3AQ9NY46 2000 aa0.9□□□□□ -2.27
LTN1-204ENST00000475344 FUOMA2VDF0 154 aa0.9□□□□□ -2.27
LTN1-204ENST00000475344 AHSA1O95433 338 aa0.9□□□□□ -2.27
LTN1-204ENST00000475344 SPCS3P61009 180 aa0.9□□□□□ -2.27
LTN1-204ENST00000475344 SUPT4H1P63272 117 aaKnown RBP0.9□□□□□ -2.27
LTN1-204ENST00000475344 ZNF345Q14585 488 aa0.9□□□□□ -2.27
LTN1-204ENST00000475344 CDK5R1Q15078 307 aa0.9□□□□□ -2.27
LTN1-204ENST00000475344 PTRHD1Q6GMV3 140 aaKnown RBP0.9□□□□□ -2.27
LTN1-204ENST00000475344 Q6ZS49 121 aa0.9□□□□□ -2.27
LTN1-204ENST00000475344 LRRC25Q8N386 305 aaPredicted RBP0.9□□□□□ -2.27
LTN1-204ENST00000475344 MCFD2Q8NI22 146 aa0.9□□□□□ -2.27
LTN1-204ENST00000475344 RASSF5Q8WWW0 418 aa0.9□□□□□ -2.27
LTN1-204ENST00000475344 PPP1R2P1Q96PQ5 205 aa0.9□□□□□ -2.27
LTN1-204ENST00000475344 OR52E6Q96RD3 313 aa0.9□□□□□ -2.27
LTN1-204ENST00000475344 WDR61Q9GZS3 305 aaKnown RBP0.9□□□□□ -2.27
LTN1-204ENST00000475344 PARVGQ9HBI0 331 aa0.9□□□□□ -2.27
LTN1-204ENST00000475344 TP73-AS1Q9UF72 201 aa0.9□□□□□ -2.27
LTN1-204ENST00000475344 ROS1P08922 2347 aa0.9□□□□□ -2.27
LTN1-204ENST00000475344 GLI3P10071 1580 aa0.9□□□□□ -2.27
LTN1-204ENST00000475344 STRCQ7RTU9 1775 aa0.9□□□□□ -2.27
LTN1-204ENST00000475344 SNAPC4Q5SXM2 1469 aa0.89□□□□□ -2.27
LTN1-204ENST00000475344 PMP2P02689 132 aa0.89□□□□□ -2.27
LTN1-204ENST00000475344 RPS4Y1P22090 263 aaKnown RBP0.89□□□□□ -2.27
LTN1-204ENST00000475344 PLCXD2Q0VAA5 305 aa0.89□□□□□ -2.27
LTN1-204ENST00000475344 ITGB3BPQ13352 177 aaPredicted RBP0.89□□□□□ -2.27
LTN1-204ENST00000475344 IMPG1Q17R60 797 aa0.89□□□□□ -2.27
LTN1-204ENST00000475344 C10orf55Q5SWW7 151 aa0.89□□□□□ -2.27
LTN1-204ENST00000475344 CCDC122Q5T0U0 273 aa0.89□□□□□ -2.27
LTN1-204ENST00000475344 RPL22L1Q6P5R6 122 aaKnown RBP0.89□□□□□ -2.27
LTN1-204ENST00000475344 DEFB128Q7Z7B8 93 aa0.89□□□□□ -2.27
LTN1-204ENST00000475344 C12orf29Q8N999 325 aa0.89□□□□□ -2.27
LTN1-204ENST00000475344 C15orf53Q8NAA6 179 aa0.89□□□□□ -2.27
LTN1-204ENST00000475344 ZNF439Q8NDP4 499 aa0.89□□□□□ -2.27
LTN1-204ENST00000475344 MRPL30Q8TCC3 161 aaKnown RBP0.89□□□□□ -2.27
LTN1-204ENST00000475344 V9GYY5 206 aaPredicted RBP0.89□□□□□ -2.27
LTN1-204ENST00000475344 HECW1Q76N89 1606 aa0.89□□□□□ -2.27
LTN1-204ENST00000475344 LYPLA2O95372 231 aa0.88□□□□□ -2.27
LTN1-204ENST00000475344 IGKV1-5P01602 117 aa0.88□□□□□ -2.27
LTN1-204ENST00000475344 SHBGP04278 402 aa0.88□□□□□ -2.27
LTN1-204ENST00000475344 IFNA16P05015 189 aa0.88□□□□□ -2.27
LTN1-204ENST00000475344 EIF2B2P49770 351 aaKnown RBP0.88□□□□□ -2.27
LTN1-204ENST00000475344 DEFA1P59665 94 aa0.88□□□□□ -2.27
LTN1-204ENST00000475344 MYL6P60660 151 aa0.88□□□□□ -2.27
LTN1-204ENST00000475344 UBE2IP63279 158 aaKnown RBP0.88□□□□□ -2.27
LTN1-204ENST00000475344 KCNJ8Q15842 424 aa0.88□□□□□ -2.27
LTN1-204ENST00000475344 SPANXN3Q5MJ09 141 aa0.88□□□□□ -2.27
LTN1-204ENST00000475344 AADACL3Q5VUY0 350 aa0.88□□□□□ -2.27
LTN1-204ENST00000475344 OR8J2Q8NGG1 315 aa0.88□□□□□ -2.27
LTN1-204ENST00000475344 OR13C4Q8NGS5 318 aa0.88□□□□□ -2.27
LTN1-204ENST00000475344 TMEM106AQ96A25 262 aa0.88□□□□□ -2.27
LTN1-204ENST00000475344 IMP4Q96G21 291 aaKnown RBP0.88□□□□□ -2.27
LTN1-204ENST00000475344 DERL1Q9BUN8 251 aa0.88□□□□□ -2.27
LTN1-204ENST00000475344 MUC5BQ9HC84 5762 aaPredicted RBP0.88□□□□□ -2.27
LTN1-204ENST00000475344 TNRC6AQ8NDV7 1962 aaKnown RBP0.88□□□□□ -2.27
LTN1-204ENST00000475344 WRNQ14191 1432 aaPredicted RBP eCLIP0.88□□□□□ -2.27
LTN1-204ENST00000475344 SETD5Q9C0A6 1442 aa0.88□□□□□ -2.27
LTN1-204ENST00000475344 FBN2P35556 2912 aa0.88□□□□□ -2.27
LTN1-204ENST00000475344 MYH7BA7E2Y1 1941 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 IGKV2D-26A0A0A0MRZ7 120 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 M0R036 132 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 FAAHO00519 579 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 CHP2O43745 196 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 HLA-DRB1P01911 266 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 CLPSP04118 112 aa0.87□□□□□ -2.27
LTN1-204ENST00000475344 UBBP0CG47 229 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms