RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 TMEM106BQ9NUM4 274 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 AURKAIP1Q9NWT8 199 aaPredicted RBP14.22□□□□□ -0.13
RRP1-202ENST00000471909 PPIAL4AQ9Y536 164 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 RELBQ01201 579 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 TMEM144Q7Z5S9 345 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 TMEM256Q8N2U0 113 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 OR4S2Q8NH73 311 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 TMEM140Q9NV12 185 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 ZNRD1Q9P1U0 126 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 PXMP4Q9Y6I8 212 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 TANC2Q9HCD6 1990 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 IMMP2LQ96T52 175 aa14.21□□□□□ -0.13
RRP1-202ENST00000471909 DYNLRB1Q9NP97 96 aa14.21□□□□□ -0.13
RRP1-202ENST00000471909 A0A1B0GUS0 222 aa14.21□□□□□ -0.13
RRP1-202ENST00000471909 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.21□□□□□ -0.13
RRP1-202ENST00000471909 C15orf62A8K5M9 175 aa14.21□□□□□ -0.13
RRP1-202ENST00000471909 GNB1P62873 340 aa14.21□□□□□ -0.13
RRP1-202ENST00000471909 RPL31P62899 125 aaKnown RBP14.21□□□□□ -0.13
RRP1-202ENST00000471909 CST9LP1Q5W188 147 aa14.21□□□□□ -0.13
RRP1-202ENST00000471909 SLC25A48Q6ZT89 311 aaKnown RBP14.21□□□□□ -0.13
RRP1-202ENST00000471909 LINC01560Q8TB33 94 aa14.21□□□□□ -0.13
RRP1-202ENST00000471909 ZNF705FA8MVS1 300 aaPredicted RBP14.2□□□□□ -0.14
RRP1-202ENST00000471909 TNFRSF13BO14836 293 aaPredicted RBP14.2□□□□□ -0.14
RRP1-202ENST00000471909 ZNF705DP0CH99 300 aaPredicted RBP14.2□□□□□ -0.14
RRP1-202ENST00000471909 ZNF705BP0CI00 300 aaPredicted RBP14.2□□□□□ -0.14
RRP1-202ENST00000471909 RAB4AP20338 218 aa14.2□□□□□ -0.14
RRP1-202ENST00000471909 THBS3P49746 956 aa14.2□□□□□ -0.14
RRP1-202ENST00000471909 UBE2G2P60604 165 aa14.2□□□□□ -0.14
RRP1-202ENST00000471909 KLRB1Q12918 225 aa14.2□□□□□ -0.14
RRP1-202ENST00000471909 FOXL1Q12952 345 aa14.2□□□□□ -0.14
RRP1-202ENST00000471909 VWC2Q2TAL6 325 aa14.2□□□□□ -0.14
RRP1-202ENST00000471909 TMEM30BQ3MIR4 351 aa14.2□□□□□ -0.14
RRP1-202ENST00000471909 ANKRD39Q53RE8 183 aa14.2□□□□□ -0.14
RRP1-202ENST00000471909 ZCCHC14Q8WYQ9 949 aaKnown RBP14.2□□□□□ -0.14
RRP1-202ENST00000471909 FAM90A27PA6NNH2 459 aa14.2□□□□□ -0.14
RRP1-202ENST00000471909 NDUFB4O95168 129 aa14.2□□□□□ -0.14
RRP1-202ENST00000471909 PLAUP00749 431 aa14.2□□□□□ -0.14
RRP1-202ENST00000471909 GRNP28799 593 aaKnown RBP14.2□□□□□ -0.14
RRP1-202ENST00000471909 MEF2CQ06413 473 aaPredicted RBP14.2□□□□□ -0.14
RRP1-202ENST00000471909 LYPD2Q6UXB3 125 aa14.2□□□□□ -0.14
RRP1-202ENST00000471909 OR52E5Q8NH55 327 aa14.2□□□□□ -0.14
RRP1-202ENST00000471909 CD3EP07766 207 aa14.19□□□□□ -0.14
RRP1-202ENST00000471909 C1QTNF9P0C862 333 aa14.19□□□□□ -0.14
RRP1-202ENST00000471909 ATP5G3P48201 142 aa14.19□□□□□ -0.14
RRP1-202ENST00000471909 PDLIM3Q53GG5 364 aaPredicted RBP14.19□□□□□ -0.14
RRP1-202ENST00000471909 SGMS2Q8NHU3 365 aa14.19□□□□□ -0.14
RRP1-202ENST00000471909 DERL1Q9BUN8 251 aa14.19□□□□□ -0.14
RRP1-202ENST00000471909 MS4A5Q9H3V2 200 aa14.19□□□□□ -0.14
RRP1-202ENST00000471909 CCL21O00585 134 aa14.19□□□□□ -0.14
RRP1-202ENST00000471909 CCL3L1P16619 93 aa14.19□□□□□ -0.14
RRP1-202ENST00000471909 APOBEC3AP31941 199 aaPredicted RBP14.19□□□□□ -0.14
RRP1-202ENST00000471909 RPL29P47914 159 aaKnown RBP14.19□□□□□ -0.14
RRP1-202ENST00000471909 TMEM200BQ69YZ2 307 aa14.19□□□□□ -0.14
RRP1-202ENST00000471909 TBX15Q96SF7 602 aa14.19□□□□□ -0.14
RRP1-202ENST00000471909 GAL3ST2Q9H3Q3 398 aa14.19□□□□□ -0.14
RRP1-202ENST00000471909 KCNIP2Q9NS61 270 aa14.19□□□□□ -0.14
RRP1-202ENST00000471909 HCFC1P51610 2035 aa14.19□□□□□ -0.14
RRP1-202ENST00000471909 NUPR1O60356 82 aa14.18□□□□□ -0.14
RRP1-202ENST00000471909 VDAC2P45880 294 aaPredicted RBP14.18□□□□□ -0.14
RRP1-202ENST00000471909 ST6GALNAC3Q8NDV1 305 aa14.18□□□□□ -0.14
RRP1-202ENST00000471909 CMTM2Q8TAZ6 248 aa14.18□□□□□ -0.14
RRP1-202ENST00000471909 SFRP2Q96HF1 295 aa14.18□□□□□ -0.14
RRP1-202ENST00000471909 ADTRPQ96IZ2 230 aa14.18□□□□□ -0.14
RRP1-202ENST00000471909 MDFIC2A0A1B0GVS7 189 aa14.18□□□□□ -0.14
RRP1-202ENST00000471909 F6UZH7 168 aa14.18□□□□□ -0.14
RRP1-202ENST00000471909 CT45A6P0DMU7 189 aa14.18□□□□□ -0.14
RRP1-202ENST00000471909 CT45A5P0DMU8 189 aa14.18□□□□□ -0.14
RRP1-202ENST00000471909 CT45A7P0DMV0 189 aa14.18□□□□□ -0.14
RRP1-202ENST00000471909 ZNF25P17030 456 aaPredicted RBP14.18□□□□□ -0.14
RRP1-202ENST00000471909 EFNB3Q15768 340 aa14.18□□□□□ -0.14
RRP1-202ENST00000471909 FBXL19-AS1Q494R0 122 aa14.18□□□□□ -0.14
RRP1-202ENST00000471909 OR4A47Q6IF82 309 aa14.18□□□□□ -0.14
RRP1-202ENST00000471909 CTSZQ9UBR2 303 aa14.18□□□□□ -0.14
RRP1-202ENST00000471909 ATRXP46100 2492 aa14.18□□□□□ -0.14
RRP1-202ENST00000471909 PGPEP1LA6NFU8 196 aa14.17□□□□□ -0.14
RRP1-202ENST00000471909 SOX15O60248 233 aa14.17□□□□□ -0.14
RRP1-202ENST00000471909 CHRNB4P30926 498 aa14.17□□□□□ -0.14
RRP1-202ENST00000471909 ZNF705AQ6ZN79 300 aaPredicted RBP14.17□□□□□ -0.14
RRP1-202ENST00000471909 ZNF714Q96N38 554 aa14.17□□□□□ -0.14
RRP1-202ENST00000471909 A0A1W2PPV4 95 aa14.17□□□□□ -0.14
RRP1-202ENST00000471909 C15orf61A6NNL5 157 aa14.17□□□□□ -0.14
RRP1-202ENST00000471909 M0QZK8 103 aa14.17□□□□□ -0.14
RRP1-202ENST00000471909 ADMP35318 185 aa14.17□□□□□ -0.14
RRP1-202ENST00000471909 ZNF114Q8NC26 417 aa14.17□□□□□ -0.14
RRP1-202ENST00000471909 H1FXQ92522 213 aaKnown RBP14.17□□□□□ -0.14
RRP1-202ENST00000471909 HEYLQ9NQ87 328 aaPredicted RBP14.17□□□□□ -0.14
RRP1-202ENST00000471909 TCF19Q9Y242 345 aa14.17□□□□□ -0.14
RRP1-202ENST00000471909 B9A039 149 aa14.16□□□□□ -0.14
RRP1-202ENST00000471909 SIAH2O43255 324 aa14.16□□□□□ -0.14
RRP1-202ENST00000471909 NDUFB3O43676 98 aa14.16□□□□□ -0.14
RRP1-202ENST00000471909 CDSNQ15517 529 aa14.16□□□□□ -0.14
RRP1-202ENST00000471909 GCSAMLQ5JQS6 135 aa14.16□□□□□ -0.14
RRP1-202ENST00000471909 YLPM1P49750 1951 aaKnown RBP14.16□□□□□ -0.14
RRP1-202ENST00000471909 RRHO14718 337 aa14.16□□□□□ -0.14
RRP1-202ENST00000471909 IGKV1-16P04430 117 aa14.16□□□□□ -0.14
RRP1-202ENST00000471909 C21orf62-AS1Q17RA5 79 aa14.16□□□□□ -0.14
RRP1-202ENST00000471909 LRRC10Q5BKY1 277 aa14.16□□□□□ -0.14
RRP1-202ENST00000471909 RAB1CQ92928 201 aa14.16□□□□□ -0.14
RRP1-202ENST00000471909 IGHV1-69-2A0A0G2JMI3 117 aa14.15□□□□□ -0.14
RRP1-202ENST00000471909 TMEM249Q2WGJ8 235 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms