RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 TMEM106BQ9NUM4 274 aa11.94□□□□□ -0.5
CBWD3-205ENST00000469687 ZNF835Q9Y2P0 537 aa11.94□□□□□ -0.5
CBWD3-205ENST00000469687 SHISA9B4DS77 424 aa11.93□□□□□ -0.5
CBWD3-205ENST00000469687 PPP5D1E7EU14 171 aa11.93□□□□□ -0.5
CBWD3-205ENST00000469687 RHOBP62745 196 aa11.93□□□□□ -0.5
CBWD3-205ENST00000469687 MEF2CQ06413 473 aaPredicted RBP11.93□□□□□ -0.5
CBWD3-205ENST00000469687 TBR1Q16650 682 aa11.93□□□□□ -0.5
CBWD3-205ENST00000469687 FAM78BQ5VT40 261 aa11.93□□□□□ -0.5
CBWD3-205ENST00000469687 DMRTC2Q8IXT2 367 aaPredicted RBP11.93□□□□□ -0.5
CBWD3-205ENST00000469687 BET1LQ9NYM9 111 aa11.93□□□□□ -0.5
CBWD3-205ENST00000469687 ELOA3CA0A087WX78 387 aaPredicted RBP11.92□□□□□ -0.5
CBWD3-205ENST00000469687 E7EQL1 145 aa11.92□□□□□ -0.5
CBWD3-205ENST00000469687 F6UZH7 168 aa11.92□□□□□ -0.5
CBWD3-205ENST00000469687 TNFRSF13BO14836 293 aaPredicted RBP11.92□□□□□ -0.5
CBWD3-205ENST00000469687 TMEM30BQ3MIR4 351 aa11.92□□□□□ -0.5
CBWD3-205ENST00000469687 OR2T10Q8NGZ9 312 aa11.92□□□□□ -0.5
CBWD3-205ENST00000469687 RNASE6Q93091 150 aaKnown RBP11.92□□□□□ -0.5
CBWD3-205ENST00000469687 ZZEF1O43149 2961 aa11.92□□□□□ -0.5
CBWD3-205ENST00000469687 DVL1O14640 695 aa11.92□□□□□ -0.5
CBWD3-205ENST00000469687 GGCTO75223 188 aaKnown RBP11.92□□□□□ -0.5
CBWD3-205ENST00000469687 IGHV2-70P01814 119 aa11.92□□□□□ -0.5
CBWD3-205ENST00000469687 RNASE2P10153 161 aaKnown RBP11.92□□□□□ -0.5
CBWD3-205ENST00000469687 RAB31Q13636 194 aa11.92□□□□□ -0.5
CBWD3-205ENST00000469687 GAMTQ14353 236 aa11.92□□□□□ -0.5
CBWD3-205ENST00000469687 C10orf55Q5SWW7 151 aa11.92□□□□□ -0.5
CBWD3-205ENST00000469687 OR9G1Q8NH87 305 aa11.92□□□□□ -0.5
CBWD3-205ENST00000469687 SLC45A2Q9UMX9 530 aa11.92□□□□□ -0.5
CBWD3-205ENST00000469687 SSUH2Q9Y2M2 353 aa11.92□□□□□ -0.5
CBWD3-205ENST00000469687 APOA2P02652 100 aa11.91□□□□□ -0.5
CBWD3-205ENST00000469687 DLX1P56177 255 aa11.91□□□□□ -0.5
CBWD3-205ENST00000469687 PRB3Q04118 309 aaPredicted RBP11.91□□□□□ -0.5
CBWD3-205ENST00000469687 OR5AN1Q8NGI8 311 aa11.91□□□□□ -0.5
CBWD3-205ENST00000469687 OR10X1Q8NGY0 326 aa11.91□□□□□ -0.5
CBWD3-205ENST00000469687 FUT9Q9Y231 359 aa11.91□□□□□ -0.5
CBWD3-205ENST00000469687 TRBV23-1A0A0A0MS06 115 aa11.91□□□□□ -0.5
CBWD3-205ENST00000469687 NDUFB3O43676 98 aa11.91□□□□□ -0.5
CBWD3-205ENST00000469687 FAM87AP0C7U9 286 aa11.91□□□□□ -0.5
CBWD3-205ENST00000469687 LOXP28300 417 aaPredicted RBP11.91□□□□□ -0.5
CBWD3-205ENST00000469687 OR10J1P30954 320 aa11.91□□□□□ -0.5
CBWD3-205ENST00000469687 TMEM144Q7Z5S9 345 aa11.91□□□□□ -0.5
CBWD3-205ENST00000469687 OCC1Q8TAD7 63 aa11.91□□□□□ -0.5
CBWD3-205ENST00000469687 OSR1Q8TAX0 266 aaPredicted RBP11.91□□□□□ -0.5
CBWD3-205ENST00000469687 HIST1H2BLQ99880 126 aa11.91□□□□□ -0.5
CBWD3-205ENST00000469687 NABP2Q9BQ15 211 aa11.91□□□□□ -0.5
CBWD3-205ENST00000469687 SCNM1Q9BWG6 230 aa11.91□□□□□ -0.5
CBWD3-205ENST00000469687 CSMD1Q96PZ7 3565 aa11.9□□□□□ -0.5
CBWD3-205ENST00000469687 IL3RAP26951 378 aa11.9□□□□□ -0.5
CBWD3-205ENST00000469687 SRP14P37108 136 aaKnown RBP11.9□□□□□ -0.5
CBWD3-205ENST00000469687 C2orf83Q53S99 150 aa11.9□□□□□ -0.5
CBWD3-205ENST00000469687 OR5B3Q8NH48 314 aa11.9□□□□□ -0.5
CBWD3-205ENST00000469687 TMEM37Q8WXS4 190 aa11.9□□□□□ -0.5
CBWD3-205ENST00000469687 FLYWCH2Q96CP2 140 aaKnown RBP11.9□□□□□ -0.5
CBWD3-205ENST00000469687 ZNF503Q96F45 646 aa11.9□□□□□ -0.5
CBWD3-205ENST00000469687 SFRP2Q96HF1 295 aa11.9□□□□□ -0.5
CBWD3-205ENST00000469687 DYNLRB1Q9NP97 96 aa11.9□□□□□ -0.5
CBWD3-205ENST00000469687 NDUFA4L2Q9NRX3 87 aa11.9□□□□□ -0.5
CBWD3-205ENST00000469687 PITPNC1Q9UKF7 332 aa11.9□□□□□ -0.5
CBWD3-205ENST00000469687 TPRP12270 2363 aaKnown RBP11.9□□□□□ -0.51
CBWD3-205ENST00000469687 CGB1A6NKQ9 187 aa11.89□□□□□ -0.51
CBWD3-205ENST00000469687 FNDC10F2Z333 226 aa11.89□□□□□ -0.51
CBWD3-205ENST00000469687 RPL8P62917 257 aaKnown RBP11.89□□□□□ -0.51
CBWD3-205ENST00000469687 SSBP2P81877 361 aaPredicted RBP11.89□□□□□ -0.51
CBWD3-205ENST00000469687 LRRC10Q5BKY1 277 aa11.89□□□□□ -0.51
CBWD3-205ENST00000469687 OR2T6Q8NHC8 308 aa11.89□□□□□ -0.51
CBWD3-205ENST00000469687 RITA1Q96K30 269 aa11.89□□□□□ -0.51
CBWD3-205ENST00000469687 COMMD5Q9GZQ3 224 aa11.89□□□□□ -0.51
CBWD3-205ENST00000469687 A0A0U1RQK1 487 aa11.89□□□□□ -0.51
CBWD3-205ENST00000469687 K7EN84 100 aa11.89□□□□□ -0.51
CBWD3-205ENST00000469687 PLAUP00749 431 aa11.89□□□□□ -0.51
CBWD3-205ENST00000469687 IGHV3-48P01763 117 aa11.89□□□□□ -0.51
CBWD3-205ENST00000469687 DLX6P56179 175 aa11.89□□□□□ -0.51
CBWD3-205ENST00000469687 PSG5Q15238 335 aa11.89□□□□□ -0.51
CBWD3-205ENST00000469687 TMEM177Q53S58 311 aa11.89□□□□□ -0.51
CBWD3-205ENST00000469687 ACTL10Q5JWF8 245 aa11.89□□□□□ -0.51
CBWD3-205ENST00000469687 PACRGQ96M98 296 aaPredicted RBP11.89□□□□□ -0.51
CBWD3-205ENST00000469687 TPSG1Q9NRR2 321 aa11.89□□□□□ -0.51
CBWD3-205ENST00000469687 MALRD1Q5VYJ5 2156 aa11.89□□□□□ -0.51
CBWD3-205ENST00000469687 ABCA4P78363 2273 aa11.89□□□□□ -0.51
CBWD3-205ENST00000469687 XKRY2A2RUG3 117 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 TYMSP04818 313 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 CD69Q07108 199 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 KCNIP4Q6PIL6 250 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 TMEM183AQ8IXX5 376 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 OR1L8Q8NGR8 309 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 ST6GALNAC6Q969X2 333 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 TXNDC17Q9BRA2 123 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 FKBP11Q9NYL4 201 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 NBASA2RRP1 2371 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 IGHV3-72A0A0B4J1Y9 119 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 LYNX1G3V0Z9 82 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 IGLV2-23P01705 113 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 LYNX1P0DP58 116 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 CD99P14209 185 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 WT1-ASQ06250 92 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 HLA-DRB5Q30154 266 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 MORN5Q5VZ52 161 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 TEX38Q6PEX7 206 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 OR1P1Q8NH06 330 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 SGMS2Q8NHU3 365 aa11.88□□□□□ -0.51
CBWD3-205ENST00000469687 ACY3Q96HD9 319 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms