RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 BAIAP2Q9UQB8 552 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 HECW2Q9P2P5 1572 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 SETD5Q9C0A6 1442 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 ADCY9O60503 1353 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 MTUS2Q5JR59 1369 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 IGKV3D-7A0A0C4DH55 119 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 IGKV3OR2-268A0A0C4DH90 116 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 FABP5P3A8MUU1 101 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 HCRTO43612 131 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 CHP2O43745 196 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 ORC5O43913 435 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 SHBGP04278 402 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 IFNA16P05015 189 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 SERPINA6P08185 405 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 METTL15P1P0C7V9 234 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 SNRPD2P62316 118 aaKnown RBP0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 GRK1Q15835 563 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 NDUFA5Q16718 116 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 AADACL3Q5VUY0 350 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 LPCAT4Q643R3 524 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 PTRHD1Q6GMV3 140 aaKnown RBP0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 ZNF826PQ6ZT77 177 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 C15orf53Q8NAA6 179 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 OR8J2Q8NGG1 315 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 RASSF5Q8WWW0 418 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 C11orf40Q8WZ69 217 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 IMP4Q96G21 291 aaKnown RBP0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 TSPAN32Q96QS1 320 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 OR52E6Q96RD3 313 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 MRPS26Q9BYN8 205 aaKnown RBP0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 YIPF3Q9GZM5 350 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 CMTM6Q9NX76 183 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 MRPL27Q9P0M9 148 aaKnown RBP0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 LSM5Q9Y4Y9 91 aaKnown RBP0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 RALGAPA2Q2PPJ7 1873 aa0.47□□□□□ -2.33
NUCKS1-202ENST00000464938 MYH11P35749 1972 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 ROBO3Q96MS0 1386 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 IGKV2-40A0A087WW87 121 aaPredicted RBP0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 TGIF2-C20orf24A0A0A6YYL0 155 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 PQLC2LA1A4F0 135 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 M0R036 132 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 KPNA3O00505 521 aaPredicted RBP0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 SDCBPO00560 298 aaPredicted RBP0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 IGKV2D-40P01614 121 aaPredicted RBP0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 HLA-DRB1P01911 266 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 RPS4Y1P22090 263 aaKnown RBP0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 HIST1H2BOP23527 126 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 HIST1H2BBP33778 126 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 HIST1H2BDP58876 126 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 SPCS3P61009 180 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 HIST1H2BCP62807 126 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 CTAG1AP78358 180 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 STX5Q13190 355 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 HIST2H2BEQ16778 126 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 ACOT6Q3I5F7 207 aaPredicted RBP0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 SPANXN3Q5MJ09 141 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 C8orf74Q6P047 294 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 DEFB128Q7Z7B8 93 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 C20orf196Q8IYI0 205 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 OR51D1Q8NGF3 324 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 TERB2Q8NHR7 220 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 HIST1H2BHQ93079 126 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 HIST1H2BNQ99877 126 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 HIST1H2BMQ99879 126 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 NIPSNAP1Q9BPW8 284 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 FBXL12Q9NXK8 326 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 MED13Q9UHV7 2174 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 BAZ2BQ9UIF8 2168 aaKnown RBP0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 CACNA1BQ00975 2339 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 HECW1Q76N89 1606 aa0.46□□□□□ -2.34
NUCKS1-202ENST00000464938 MUC16Q8WXI7 14507 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 IGKV3-7A0A075B6H7 116 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 CLDN24A6NM45 220 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 BUB1B-PAK6H3BSN5 160 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 C19orf84I3L1E1 186 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 PSMD12O00232 456 aaPredicted RBP0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 FAAHO00519 579 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 OR2J2O76002 312 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 PMP2P02689 132 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 CTSDP07339 412 aaPredicted RBP0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 CD79AP11912 226 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 RPL5P46777 297 aaKnown RBP0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 SULT1A1P50225 295 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 PSME3P61289 254 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 RANP62826 216 aaKnown RBP0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 ZNF846Q147U1 533 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 CDK5R1Q15078 307 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 RGS21Q2M5E4 152 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 CCDC122Q5T0U0 273 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 LPCAT3Q6P1A2 487 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 RPL22L1Q6P5R6 122 aaKnown RBP0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 Q6ZQT0 140 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 RPS19BP1Q86WX3 136 aaKnown RBP0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 C12orf45Q8N5I9 185 aaPredicted RBP0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 CLDN22Q8N7P3 220 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 OR5B17Q8NGF7 314 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 TOMM6Q96B49 74 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 PPP1R2P1Q96PQ5 205 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms