RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 MT-CO2P00403 227 aa11.56□□□□□ -0.56
SCFD1-203ENST00000458591 RPLP1P05386 114 aaKnown RBP11.56□□□□□ -0.56
SCFD1-203ENST00000458591 CRISP2P16562 243 aa11.56□□□□□ -0.56
SCFD1-203ENST00000458591 RHOBP62745 196 aa11.56□□□□□ -0.56
SCFD1-203ENST00000458591 TMEM183BQ1AE95 376 aa11.56□□□□□ -0.56
SCFD1-203ENST00000458591 MORN5Q5VZ52 161 aa11.56□□□□□ -0.56
SCFD1-203ENST00000458591 PQLC2Q6ZP29 291 aa11.56□□□□□ -0.56
SCFD1-203ENST00000458591 OR9G1Q8NH87 305 aa11.56□□□□□ -0.56
SCFD1-203ENST00000458591 PPP1R35Q8TAP8 253 aa11.56□□□□□ -0.56
SCFD1-203ENST00000458591 NABP2Q9BQ15 211 aa11.56□□□□□ -0.56
SCFD1-203ENST00000458591 ENY2Q9NPA8 101 aa11.56□□□□□ -0.56
SCFD1-203ENST00000458591 PARD6AQ9NPB6 346 aa11.56□□□□□ -0.56
SCFD1-203ENST00000458591 MAP1BP46821 2468 aaKnown RBP11.56□□□□□ -0.56
SCFD1-203ENST00000458591 ADGRG4Q8IZF6 3080 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 CACNA1HO95180 2353 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 TRAV17A0A0B4J275 112 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 TRGV8A0A0C4DH27 118 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 J3QR06 171 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 CT45A6P0DMU7 189 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 CT45A5P0DMU8 189 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 CT45A7P0DMV0 189 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 CASP6P55212 293 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 KLF3P57682 345 aaPredicted RBP11.55□□□□□ -0.56
SCFD1-203ENST00000458591 SSBP2P81877 361 aaPredicted RBP11.55□□□□□ -0.56
SCFD1-203ENST00000458591 PRR31Q5SQ13 230 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 NHLRC2Q8NBF2 726 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 ST6GALNAC3Q8NDV1 305 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 C20orf144Q9BQM9 153 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 FOXA2Q9Y261 457 aaPredicted RBP11.55□□□□□ -0.56
SCFD1-203ENST00000458591 YLPM1P49750 1951 aaKnown RBP11.55□□□□□ -0.56
SCFD1-203ENST00000458591 E7EUB6 86 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 ESDP10768 282 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 ZNF25P17030 456 aaPredicted RBP11.55□□□□□ -0.56
SCFD1-203ENST00000458591 REG1BP48304 166 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 CENPWQ5EE01 88 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 TEX43Q6ZNM6 134 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 LHFPL4Q7Z7J7 247 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 MMD2Q8IY49 270 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 ZNF439Q8NDP4 499 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 UHRF2Q96PU4 802 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 GCM1Q9NP62 436 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 V9GYV3 84 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 CEP250Q9BV73 2442 aa11.55□□□□□ -0.56
SCFD1-203ENST00000458591 PLCE1Q9P212 2302 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 SNURFLB1AK76 121 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 FCN1O00602 326 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 LGALS4P56470 323 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 NEUROG1Q92886 237 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 LINC00479Q96M42 142 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 GAFA1Q96PS6 74 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 FAM103A1Q9BTL3 118 aaKnown RBP11.54□□□□□ -0.56
SCFD1-203ENST00000458591 SLC45A2Q9UMX9 530 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 TEX50A0A1B0GTY4 177 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 CA1P00915 261 aaPredicted RBP11.54□□□□□ -0.56
SCFD1-203ENST00000458591 RPL19P84098 196 aaKnown RBP11.54□□□□□ -0.56
SCFD1-203ENST00000458591 FAM27E3Q08E93 113 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 IGFL2Q6UWQ7 119 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 BAGE3Q86Y29 109 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 BAGE2Q86Y30 109 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 OR5AU1Q8NGC0 362 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 OR2T6Q8NHC8 308 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 HSPB9Q9BQS6 159 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 MIEN1Q9BRT3 115 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 SAMD10Q9BYL1 202 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 ASCL3Q9NQ33 180 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 LY96Q9Y6Y9 160 aa11.54□□□□□ -0.56
SCFD1-203ENST00000458591 TRGV10A0A0A0MS01 117 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 GGTLC3B5MD39 225 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 C9JCJ5 164 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 OR7C2O60412 319 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 RPEL1Q2QD12 228 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 TPTE2P1Q5T6R2 138 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 VAMP8Q9BV40 100 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 FAM215AQ9Y5M1 114 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 ATMQ13315 3056 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 TRBV9A0A0B4J1U6 114 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 HELTA6NFD8 242 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 K7EM74 188 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 IGHV1-46P01743 117 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 CFHR2P36980 270 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 KIR2DS2P43631 304 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 SUMO1P63165 101 aaKnown RBP11.53□□□□□ -0.56
SCFD1-203ENST00000458591 DIAPH2-AS1Q14236 149 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 C11orf52Q96A22 123 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 LOXL4Q96JB6 756 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 PLEKHA3Q9HB20 300 aa11.53□□□□□ -0.56
SCFD1-203ENST00000458591 FTH1P19P0C7X4 201 aa11.52□□□□□ -0.57
SCFD1-203ENST00000458591 GLRXP35754 106 aa11.52□□□□□ -0.57
SCFD1-203ENST00000458591 RAB7AP51149 207 aa11.52□□□□□ -0.57
SCFD1-203ENST00000458591 TNFAIP6P98066 277 aaPredicted RBP11.52□□□□□ -0.57
SCFD1-203ENST00000458591 MZT1Q08AG7 82 aa11.52□□□□□ -0.57
SCFD1-203ENST00000458591 RAB31Q13636 194 aa11.52□□□□□ -0.57
SCFD1-203ENST00000458591 TUBG2Q9NRH3 451 aa11.52□□□□□ -0.57
SCFD1-203ENST00000458591 SLC35D1Q9NTN3 355 aa11.52□□□□□ -0.57
SCFD1-203ENST00000458591 RNF7Q9UBF6 113 aa11.52□□□□□ -0.57
SCFD1-203ENST00000458591 TTC28Q96AY4 2481 aa11.52□□□□□ -0.57
SCFD1-203ENST00000458591 AKAP13Q12802 2813 aa11.52□□□□□ -0.57
SCFD1-203ENST00000458591 UPK2O00526 184 aa11.52□□□□□ -0.57
SCFD1-203ENST00000458591 SAA1P0DJI8 122 aaPredicted RBP11.52□□□□□ -0.57
SCFD1-203ENST00000458591 CCL3L1P16619 93 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms