RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 PCNX2A6NKB5 2137 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 H0Y8G0 127 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 M0R1X1 148 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 IGLV2-8P01709 118 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 PPBPP02775 128 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 GPR12P47775 334 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 ARG2P78540 354 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 Q0VFX4 171 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 NRN1LQ496H8 165 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 PRR27Q6MZM9 219 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 LINC00173Q6ZV60 143 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 OR52E5Q8NH55 327 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 HEATR1Q9H583 2144 aaKnown RBP11.5□□□□□ -0.57
VPS52-212ENST00000445902 SMIM27A0A1W2PRY6 76 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 C2orf70A6NJV1 201 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 REG1AP05451 166 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 NPY1RP25929 384 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 ZNF841Q6ZN19 808 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 FAM214BQ7L5A3 538 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 MDP1Q86V88 176 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 PNKDQ8N490 385 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 OR8B3Q8NGG8 313 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 OR2T6Q8NHC8 308 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 TNFRSF19Q9NS68 423 aa11.5□□□□□ -0.57
VPS52-212ENST00000445902 LY6G6EA0A0G2JKS1 128 aa11.49□□□□□ -0.57
VPS52-212ENST00000445902 LINC00869P0C866 280 aa11.49□□□□□ -0.57
VPS52-212ENST00000445902 AREGP15514 252 aa11.49□□□□□ -0.57
VPS52-212ENST00000445902 Q8IYB0 196 aa11.49□□□□□ -0.57
VPS52-212ENST00000445902 NUDT10Q8NFP7 164 aa11.49□□□□□ -0.57
VPS52-212ENST00000445902 OR2Y1Q8NGV0 311 aa11.49□□□□□ -0.57
VPS52-212ENST00000445902 BCL2L2Q92843 193 aaPredicted RBP11.49□□□□□ -0.57
VPS52-212ENST00000445902 HES7Q9BYE0 225 aa11.49□□□□□ -0.57
VPS52-212ENST00000445902 TCF19Q9Y242 345 aa11.49□□□□□ -0.57
VPS52-212ENST00000445902 TIMM8BQ9Y5J9 83 aaPredicted RBP11.49□□□□□ -0.57
VPS52-212ENST00000445902 U3KQA8 63 aa11.49□□□□□ -0.57
VPS52-212ENST00000445902 IZUMO1RA6ND01 250 aa11.49□□□□□ -0.57
VPS52-212ENST00000445902 OR4C46A6NHA9 309 aa11.49□□□□□ -0.57
VPS52-212ENST00000445902 DUTP33316 252 aaKnown RBP11.49□□□□□ -0.57
VPS52-212ENST00000445902 TBR1Q16650 682 aa11.49□□□□□ -0.57
VPS52-212ENST00000445902 SMRP1Q8NCR6 262 aa11.49□□□□□ -0.57
VPS52-212ENST00000445902 ZNF503Q96F45 646 aa11.49□□□□□ -0.57
VPS52-212ENST00000445902 ISLRO14498 428 aa11.49□□□□□ -0.57
VPS52-212ENST00000445902 LRRC10Q5BKY1 277 aa11.49□□□□□ -0.57
VPS52-212ENST00000445902 LINC00470Q9BZP3 86 aa11.49□□□□□ -0.57
VPS52-212ENST00000445902 TMEM140Q9NV12 185 aa11.49□□□□□ -0.57
VPS52-212ENST00000445902 FOXA3P55318 350 aaPredicted RBP11.48□□□□□ -0.57
VPS52-212ENST00000445902 ERVK-16P61578 105 aa11.48□□□□□ -0.57
VPS52-212ENST00000445902 NABP2Q9BQ15 211 aa11.48□□□□□ -0.57
VPS52-212ENST00000445902 OBP2BQ9NPH6 170 aa11.48□□□□□ -0.57
VPS52-212ENST00000445902 MRPL27Q9P0M9 148 aaKnown RBP11.48□□□□□ -0.57
VPS52-212ENST00000445902 CORTO00230 105 aa11.48□□□□□ -0.57
VPS52-212ENST00000445902 RIPPLY3P57055 190 aa11.48□□□□□ -0.57
VPS52-212ENST00000445902 TRAT1Q6PIZ9 186 aa11.48□□□□□ -0.57
VPS52-212ENST00000445902 GNG12Q9UBI6 72 aa11.48□□□□□ -0.57
VPS52-212ENST00000445902 IGKV3D-15A0A087WSY6 115 aa11.47□□□□□ -0.57
VPS52-212ENST00000445902 CER1O95813 267 aa11.47□□□□□ -0.57
VPS52-212ENST00000445902 FOLR3P41439 243 aa11.47□□□□□ -0.57
VPS52-212ENST00000445902 COX19Q49B96 90 aa11.47□□□□□ -0.57
VPS52-212ENST00000445902 SLC35E4Q6ICL7 350 aa11.47□□□□□ -0.57
VPS52-212ENST00000445902 SGK494Q96LW2 274 aa11.47□□□□□ -0.57
VPS52-212ENST00000445902 ZPBPQ9BS86 351 aa11.47□□□□□ -0.57
VPS52-212ENST00000445902 LOXL2Q9Y4K0 774 aa11.47□□□□□ -0.57
VPS52-212ENST00000445902 ICE1Q9Y2F5 2266 aa11.47□□□□□ -0.57
VPS52-212ENST00000445902 RAB31Q13636 194 aa11.47□□□□□ -0.57
VPS52-212ENST00000445902 BVES-AS1Q5T3Y7 98 aa11.47□□□□□ -0.57
VPS52-212ENST00000445902 LEAP2Q969E1 77 aa11.47□□□□□ -0.57
VPS52-212ENST00000445902 TMEM70Q9BUB7 260 aa11.47□□□□□ -0.57
VPS52-212ENST00000445902 TMPRSS3P57727 454 aa11.46□□□□□ -0.57
VPS52-212ENST00000445902 RHOGP84095 191 aa11.46□□□□□ -0.57
VPS52-212ENST00000445902 NUP35Q8NFH5 326 aa11.46□□□□□ -0.57
VPS52-212ENST00000445902 IGF2BP2-AS1Q96M15 143 aa11.46□□□□□ -0.57
VPS52-212ENST00000445902 PMCHL2Q9BQD1 86 aa11.46□□□□□ -0.57
VPS52-212ENST00000445902 SVILO95425 2214 aa11.46□□□□□ -0.57
VPS52-212ENST00000445902 TRAV5A0A0B4J249 113 aa11.46□□□□□ -0.57
VPS52-212ENST00000445902 WISP2O76076 250 aa11.46□□□□□ -0.57
VPS52-212ENST00000445902 CYB561P49447 251 aa11.46□□□□□ -0.57
VPS52-212ENST00000445902 MLANAQ16655 118 aa11.46□□□□□ -0.57
VPS52-212ENST00000445902 UTF1Q5T230 341 aa11.46□□□□□ -0.57
VPS52-212ENST00000445902 CSTL1Q9H114 145 aa11.46□□□□□ -0.57
VPS52-212ENST00000445902 A0A087X0K7 114 aa11.46□□□□□ -0.58
VPS52-212ENST00000445902 SNAI2O43623 268 aa11.46□□□□□ -0.58
VPS52-212ENST00000445902 SAP30O75446 220 aa11.46□□□□□ -0.58
VPS52-212ENST00000445902 PPOXP50336 477 aa11.46□□□□□ -0.58
VPS52-212ENST00000445902 PRR20EP86478 221 aa11.46□□□□□ -0.58
VPS52-212ENST00000445902 PRR20CP86479 221 aa11.46□□□□□ -0.58
VPS52-212ENST00000445902 PRR20DP86480 221 aa11.46□□□□□ -0.58
VPS52-212ENST00000445902 PRR20BP86481 221 aa11.46□□□□□ -0.58
VPS52-212ENST00000445902 PRR20AP86496 221 aa11.46□□□□□ -0.58
VPS52-212ENST00000445902 PSG9Q00887 426 aa11.46□□□□□ -0.58
VPS52-212ENST00000445902 SLC25A40Q8TBP6 338 aa11.46□□□□□ -0.58
VPS52-212ENST00000445902 URB1-AS1Q96HZ7 61 aa11.46□□□□□ -0.58
VPS52-212ENST00000445902 SAP30LQ9HAJ7 183 aa11.46□□□□□ -0.58
VPS52-212ENST00000445902 TMEM167BQ9NRX6 74 aa11.46□□□□□ -0.58
VPS52-212ENST00000445902 FZR1Q9UM11 496 aa11.46□□□□□ -0.58
VPS52-212ENST00000445902 WDFY4Q6ZS81 3184 aa11.45□□□□□ -0.58
VPS52-212ENST00000445902 SP1P08047 785 aa11.45□□□□□ -0.58
VPS52-212ENST00000445902 MAGEA5P43359 124 aa11.45□□□□□ -0.58
VPS52-212ENST00000445902 MORN5Q5VZ52 161 aa11.45□□□□□ -0.58
VPS52-212ENST00000445902 SNRNP40Q96DI7 357 aaKnown RBP11.45□□□□□ -0.58
VPS52-212ENST00000445902 IGKV1OR2-108A0A075B7D4 117 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms