RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 OR5R1Q8NH85 324 aa8.49□□□□□ -1.05
CD44-210ENST00000434472 H1FXQ92522 213 aaKnown RBP8.49□□□□□ -1.05
CD44-210ENST00000434472 NDUFA4L2Q9NRX3 87 aa8.49□□□□□ -1.05
CD44-210ENST00000434472 KAAG1Q9UBP8 84 aa8.49□□□□□ -1.05
CD44-210ENST00000434472 DIDO1Q9BTC0 2240 aaKnown RBP8.49□□□□□ -1.05
CD44-210ENST00000434472 RAI1Q7Z5J4 1906 aaPredicted RBP8.49□□□□□ -1.05
CD44-210ENST00000434472 DSCAMO60469 2012 aa8.48□□□□□ -1.05
CD44-210ENST00000434472 OR5G3P0C626 314 aa8.48□□□□□ -1.05
CD44-210ENST00000434472 OR10J1P30954 320 aa8.48□□□□□ -1.05
CD44-210ENST00000434472 RPL15P61313 204 aaKnown RBP8.48□□□□□ -1.05
CD44-210ENST00000434472 RPL19P84098 196 aaKnown RBP8.48□□□□□ -1.05
CD44-210ENST00000434472 VMA21Q3ZAQ7 101 aa8.48□□□□□ -1.05
CD44-210ENST00000434472 TEX38Q6PEX7 206 aa8.48□□□□□ -1.05
CD44-210ENST00000434472 OR10X1Q8NGY0 326 aa8.48□□□□□ -1.05
CD44-210ENST00000434472 OCC1Q8TAD7 63 aa8.48□□□□□ -1.05
CD44-210ENST00000434472 RND1Q92730 232 aa8.48□□□□□ -1.05
CD44-210ENST00000434472 RNASE6Q93091 150 aaKnown RBP8.48□□□□□ -1.05
CD44-210ENST00000434472 SNRNP40Q96DI7 357 aaKnown RBP8.48□□□□□ -1.05
CD44-210ENST00000434472 DERL1Q9BUN8 251 aa8.48□□□□□ -1.05
CD44-210ENST00000434472 DYNLRB1Q9NP97 96 aa8.48□□□□□ -1.05
CD44-210ENST00000434472 IL36BQ9NZH7 164 aa8.48□□□□□ -1.05
CD44-210ENST00000434472 SSUH2Q9Y2M2 353 aa8.48□□□□□ -1.05
CD44-210ENST00000434472 WASHC3Q9Y3C0 194 aa8.48□□□□□ -1.05
CD44-210ENST00000434472 TRAPPC1Q9Y5R8 145 aa8.48□□□□□ -1.05
CD44-210ENST00000434472 DSCAML1Q8TD84 2053 aa8.48□□□□□ -1.05
CD44-210ENST00000434472 FREM2Q5SZK8 3169 aa8.48□□□□□ -1.05
CD44-210ENST00000434472 DYSFO75923 2080 aa8.48□□□□□ -1.05
CD44-210ENST00000434472 A0A087X0M5 115 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 A0A1B0GX30 115 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 FOXH1O75593 365 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 C8orf88P0DMB2 117 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 CCL3L1P16619 93 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 CNN1P51911 297 aaKnown RBP8.47□□□□□ -1.05
CD44-210ENST00000434472 ZNF137PP52743 207 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 JOSD1Q15040 202 aaPredicted RBP8.47□□□□□ -1.05
CD44-210ENST00000434472 PSG5Q15238 335 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 CLEC12BQ2HXU8 276 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 HLA-DRB5Q30154 266 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 Q8NA96 180 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 ZNF114Q8NC26 417 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 OR1L4Q8NGR5 311 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 OR9G1Q8NH87 305 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 SGMS2Q8NHU3 365 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 TMEM37Q8WXS4 190 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 TMEM18Q96B42 140 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 TET2Q6N021 2002 aaPredicted RBP8.47□□□□□ -1.05
CD44-210ENST00000434472 TRBV23-1A0A0A0MS06 115 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 A0A1W2PRE2 83 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 GATCO43716 136 aaKnown RBP8.47□□□□□ -1.05
CD44-210ENST00000434472 ACTL6BO94805 426 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 GCGP01275 180 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 AMBPP02760 352 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 CHRNB4P30926 498 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 LGALS7P47929 136 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 YPEL3P61236 119 aaPredicted RBP8.47□□□□□ -1.05
CD44-210ENST00000434472 PKIAP61925 76 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 TBR1Q16650 682 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 CCL17Q92583 94 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 TNFRSF14Q92956 283 aa8.47□□□□□ -1.05
CD44-210ENST00000434472 EAF1Q96JC9 268 aaPredicted RBP8.47□□□□□ -1.05
CD44-210ENST00000434472 TRBV20OR9-2A0A075B6H5 130 aa8.46□□□□□ -1.06
CD44-210ENST00000434472 TRAV20A0A0B4J274 112 aa8.46□□□□□ -1.06
CD44-210ENST00000434472 HELTA6NFD8 242 aa8.46□□□□□ -1.06
CD44-210ENST00000434472 OR10J4P0C629 311 aa8.46□□□□□ -1.06
CD44-210ENST00000434472 APOBEC3AP31941 199 aaPredicted RBP8.46□□□□□ -1.06
CD44-210ENST00000434472 DLX6P56179 175 aa8.46□□□□□ -1.06
CD44-210ENST00000434472 SELENOTP62341 195 aa8.46□□□□□ -1.06
CD44-210ENST00000434472 ZNF90Q03938 601 aa8.46□□□□□ -1.06
CD44-210ENST00000434472 RPEL1Q2QD12 228 aa8.46□□□□□ -1.06
CD44-210ENST00000434472 COX19Q49B96 90 aa8.46□□□□□ -1.06
CD44-210ENST00000434472 TMEM155Q4W5P6 130 aa8.46□□□□□ -1.06
CD44-210ENST00000434472 LYPD2Q6UXB3 125 aa8.46□□□□□ -1.06
CD44-210ENST00000434472 TGIF2LXQ8IUE1 241 aa8.46□□□□□ -1.06
CD44-210ENST00000434472 ST6GALNAC6Q969X2 333 aa8.46□□□□□ -1.06
CD44-210ENST00000434472 ZNF430Q9H8G1 570 aaPredicted RBP8.46□□□□□ -1.06
CD44-210ENST00000434472 AURKAIP1Q9NWT8 199 aaPredicted RBP8.46□□□□□ -1.06
CD44-210ENST00000434472 ZNRD1Q9P1U0 126 aa8.46□□□□□ -1.06
CD44-210ENST00000434472 DMDP11532 3685 aa8.45□□□□□ -1.06
CD44-210ENST00000434472 CUL9Q8IWT3 2517 aa8.45□□□□□ -1.06
CD44-210ENST00000434472 TRBV9A0A0B4J1U6 114 aa8.45□□□□□ -1.06
CD44-210ENST00000434472 PGPEP1LA6NFU8 196 aa8.45□□□□□ -1.06
CD44-210ENST00000434472 SHISA9B4DS77 424 aa8.45□□□□□ -1.06
CD44-210ENST00000434472 B9A039 149 aa8.45□□□□□ -1.06
CD44-210ENST00000434472 TSTD3H0UI37 97 aa8.45□□□□□ -1.06
CD44-210ENST00000434472 OR7C2O60412 319 aa8.45□□□□□ -1.06
CD44-210ENST00000434472 LOXP28300 417 aaPredicted RBP8.45□□□□□ -1.06
CD44-210ENST00000434472 GNG4P50150 75 aa8.45□□□□□ -1.06
CD44-210ENST00000434472 BPIFB3P59826 476 aa8.45□□□□□ -1.06
CD44-210ENST00000434472 TIGITQ495A1 244 aa8.45□□□□□ -1.06
CD44-210ENST00000434472 ETFRF1Q6IPR1 90 aa8.45□□□□□ -1.06
CD44-210ENST00000434472 WFIKKN1Q96NZ8 548 aa8.45□□□□□ -1.06
CD44-210ENST00000434472 VKORC1Q9BQB6 163 aa8.45□□□□□ -1.06
CD44-210ENST00000434472 SLC25A33Q9BSK2 321 aa8.45□□□□□ -1.06
CD44-210ENST00000434472 PRDM13Q9H4Q3 707 aa8.45□□□□□ -1.06
CD44-210ENST00000434472 DNAJC4Q9NNZ3 241 aa8.45□□□□□ -1.06
CD44-210ENST00000434472 SH3BGRL2Q9UJC5 107 aa8.45□□□□□ -1.06
CD44-210ENST00000434472 IGKV1OR2-108A0A075B7D4 117 aa8.44□□□□□ -1.06
CD44-210ENST00000434472 IGHV1-69-2A0A0G2JMI3 117 aa8.44□□□□□ -1.06
CD44-210ENST00000434472 E7EQL1 145 aa8.44□□□□□ -1.06
CD44-210ENST00000434472 FCN3O75636 299 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms