RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CMC4P56277 68 aaPredicted RBP12.27□□□□□ -0.44
PTPN13-203ENST00000427191 KIAA1644Q3SXP7 199 aa12.27□□□□□ -0.44
PTPN13-203ENST00000427191 RASL11AQ6T310 242 aa12.27□□□□□ -0.44
PTPN13-203ENST00000427191 NDUFAF3Q9BU61 184 aa12.27□□□□□ -0.44
PTPN13-203ENST00000427191 TRAV9-2A0A087WT02 112 aa12.27□□□□□ -0.45
PTPN13-203ENST00000427191 HIGD1CA8MV81 97 aa12.27□□□□□ -0.45
PTPN13-203ENST00000427191 HSD52Q0P140 79 aa12.27□□□□□ -0.45
PTPN13-203ENST00000427191 DRAM1Q8N682 238 aa12.27□□□□□ -0.45
PTPN13-203ENST00000427191 OR52E5Q8NH55 327 aa12.27□□□□□ -0.45
PTPN13-203ENST00000427191 C18orf15Q96N68 181 aa12.27□□□□□ -0.45
PTPN13-203ENST00000427191 PVRIGQ6DKI7 326 aa12.27□□□□□ -0.45
PTPN13-203ENST00000427191 LTBP4Q8N2S1 1624 aa12.27□□□□□ -0.45
PTPN13-203ENST00000427191 ERVH48-1M5A8F1 160 aa12.27□□□□□ -0.45
PTPN13-203ENST00000427191 NEU4Q8WWR8 484 aaPredicted RBP12.27□□□□□ -0.45
PTPN13-203ENST00000427191 SLC25A38Q96DW6 304 aa12.27□□□□□ -0.45
PTPN13-203ENST00000427191 WNK3Q9BYP7 1800 aa12.27□□□□□ -0.45
PTPN13-203ENST00000427191 TMEM14DPA8MWL7 114 aa12.27□□□□□ -0.45
PTPN13-203ENST00000427191 CCL4P13236 92 aa12.27□□□□□ -0.45
PTPN13-203ENST00000427191 A8MXK9 166 aa12.26□□□□□ -0.45
PTPN13-203ENST00000427191 CD5P06127 495 aa12.26□□□□□ -0.45
PTPN13-203ENST00000427191 IL11P20809 199 aa12.26□□□□□ -0.45
PTPN13-203ENST00000427191 COLQQ9Y215 455 aaPredicted RBP12.26□□□□□ -0.45
PTPN13-203ENST00000427191 DOCK3Q8IZD9 2030 aa12.26□□□□□ -0.45
PTPN13-203ENST00000427191 DUSP14O95147 198 aaKnown RBP12.26□□□□□ -0.45
PTPN13-203ENST00000427191 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.26□□□□□ -0.45
PTPN13-203ENST00000427191 WNT10AQ9GZT5 417 aa12.26□□□□□ -0.45
PTPN13-203ENST00000427191 C21orf62Q9NYP8 219 aa12.26□□□□□ -0.45
PTPN13-203ENST00000427191 ATP5J2P56134 94 aa12.26□□□□□ -0.45
PTPN13-203ENST00000427191 ZPLD1Q8TCW7 415 aa12.26□□□□□ -0.45
PTPN13-203ENST00000427191 TMEM54Q969K7 222 aa12.26□□□□□ -0.45
PTPN13-203ENST00000427191 ZNF708P17019 499 aa12.26□□□□□ -0.45
PTPN13-203ENST00000427191 CKS1BP61024 79 aa12.26□□□□□ -0.45
PTPN13-203ENST00000427191 ARPC1AQ92747 370 aa12.26□□□□□ -0.45
PTPN13-203ENST00000427191 C14orf144Q96I85 54 aa12.26□□□□□ -0.45
PTPN13-203ENST00000427191 ZAR1Q86SH2 424 aa12.26□□□□□ -0.45
PTPN13-203ENST00000427191 TRGV11A0A075B6L2 103 aa12.25□□□□□ -0.45
PTPN13-203ENST00000427191 IGKV1D-16P01601 117 aa12.25□□□□□ -0.45
PTPN13-203ENST00000427191 UCP1P25874 307 aa12.25□□□□□ -0.45
PTPN13-203ENST00000427191 Q6ZT83 130 aa12.25□□□□□ -0.45
PTPN13-203ENST00000427191 C9JCJ5 164 aa12.25□□□□□ -0.45
PTPN13-203ENST00000427191 NAPSAO96009 420 aa12.25□□□□□ -0.45
PTPN13-203ENST00000427191 GLRXP35754 106 aa12.25□□□□□ -0.45
PTPN13-203ENST00000427191 TMEM170AQ8WVE7 144 aa12.25□□□□□ -0.45
PTPN13-203ENST00000427191 OPN3Q9H1Y3 402 aaPredicted RBP12.25□□□□□ -0.45
PTPN13-203ENST00000427191 DPM3Q9P2X0 92 aa12.25□□□□□ -0.45
PTPN13-203ENST00000427191 NDUFA3O95167 84 aa12.25□□□□□ -0.45
PTPN13-203ENST00000427191 PLAC1Q9HBJ0 212 aa12.25□□□□□ -0.45
PTPN13-203ENST00000427191 TRAV21A0A0B4J279 112 aa12.25□□□□□ -0.45
PTPN13-203ENST00000427191 FABP5P3A8MUU1 101 aa12.25□□□□□ -0.45
PTPN13-203ENST00000427191 IGFBP6P24592 240 aaPredicted RBP12.25□□□□□ -0.45
PTPN13-203ENST00000427191 IGHV3-72A0A0B4J1Y9 119 aa12.25□□□□□ -0.45
PTPN13-203ENST00000427191 TMEM242Q9NWH2 141 aa12.25□□□□□ -0.45
PTPN13-203ENST00000427191 APOBEC3AP31941 199 aaPredicted RBP12.25□□□□□ -0.45
PTPN13-203ENST00000427191 XIRP1Q702N8 1843 aaKnown RBP12.24□□□□□ -0.45
PTPN13-203ENST00000427191 TPRX1Q8N7U7 411 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 GAGE13Q4V321 117 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 FBLN7Q53RD9 439 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 JMJD8Q96S16 334 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 SNAI3Q3KNW1 292 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 GREB1Q4ZG55 1949 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 CCL20P78556 96 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 SRSF4Q08170 494 aaKnown RBP12.24□□□□□ -0.45
PTPN13-203ENST00000427191 Q9H3A6 140 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 OSTCQ9NRP0 149 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 M0R2P5 195 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 REG1AP05451 166 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 ASPHD2Q6ICH7 369 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 SSBP3Q9BWW4 388 aaPredicted RBP12.24□□□□□ -0.45
PTPN13-203ENST00000427191 SIRT4Q9Y6E7 314 aaPredicted RBP12.24□□□□□ -0.45
PTPN13-203ENST00000427191 WISP3O95389 354 aaPredicted RBP12.24□□□□□ -0.45
PTPN13-203ENST00000427191 GAGE2BQ13066 116 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 GAGE2EQ4V326 116 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 FAM166AQ6J272 317 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 ACP7Q6ZNF0 438 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 PNKDQ8N490 385 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 ZIC4Q8N9L1 334 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 DNAJC30Q96LL9 226 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 GAGE2DQ9UEU5 116 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 ZDBF2Q9HCK1 2354 aa12.24□□□□□ -0.45
PTPN13-203ENST00000427191 PEBP1P30086 187 aaKnown RBP12.24□□□□□ -0.45
PTPN13-203ENST00000427191 ZNF703Q9H7S9 590 aaPredicted RBP12.24□□□□□ -0.45
PTPN13-203ENST00000427191 RHOGP84095 191 aa12.23□□□□□ -0.45
PTPN13-203ENST00000427191 TRGV2A0A075B6R0 118 aa12.23□□□□□ -0.45
PTPN13-203ENST00000427191 SMRP1Q8NCR6 262 aa12.23□□□□□ -0.45
PTPN13-203ENST00000427191 PLPPR1Q8TBJ4 325 aa12.23□□□□□ -0.45
PTPN13-203ENST00000427191 SPANXCQ9NY87 97 aa12.23□□□□□ -0.45
PTPN13-203ENST00000427191 MOSP00540 346 aa12.23□□□□□ -0.45
PTPN13-203ENST00000427191 SRP19P09132 144 aaKnown RBP12.23□□□□□ -0.45
PTPN13-203ENST00000427191 COQ2Q96H96 371 aa12.23□□□□□ -0.45
PTPN13-203ENST00000427191 TOMM7Q9P0U1 55 aa12.23□□□□□ -0.45
PTPN13-203ENST00000427191 H3BUT2 72 aa12.23□□□□□ -0.45
PTPN13-203ENST00000427191 GFRA3O60609 400 aa12.23□□□□□ -0.45
PTPN13-203ENST00000427191 ZNF562Q6V9R5 426 aa12.23□□□□□ -0.45
PTPN13-203ENST00000427191 TMEM167AQ8TBQ9 72 aa12.23□□□□□ -0.45
PTPN13-203ENST00000427191 EP300Q09472 2414 aaPredicted RBP12.22□□□□□ -0.45
PTPN13-203ENST00000427191 NRN1Q9NPD7 142 aa12.22□□□□□ -0.45
PTPN13-203ENST00000427191 LINC00312Q9Y6C7 94 aa12.22□□□□□ -0.45
PTPN13-203ENST00000427191 ORAOV1Q8WV07 137 aa12.22□□□□□ -0.45
PTPN13-203ENST00000427191 VGLL1Q99990 258 aa12.22□□□□□ -0.45
PTPN13-203ENST00000427191 IGKCP01834 107 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms