RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	TEX22	C9J3V5	150 aa		12.57	□□□□□ -0.4
DDR1-231	ENST00000417521	SNAPC5	O75971	98 aa		12.57	□□□□□ -0.4
DDR1-231	ENST00000417521	ATG12	O94817	140 aa		12.57	□□□□□ -0.4
DDR1-231	ENST00000417521	RPL27A	P46776	148 aa	Known RBP	12.57	□□□□□ -0.4
DDR1-231	ENST00000417521	MECP2	P51608	486 aa	Known RBP	12.57	□□□□□ -0.4
DDR1-231	ENST00000417521	SRPX	P78539	464 aa		12.57	□□□□□ -0.4
DDR1-231	ENST00000417521	PLET1	Q6UQ28	207 aa		12.57	□□□□□ -0.4
DDR1-231	ENST00000417521	FAM223A	Q8IWN6	122 aa		12.57	□□□□□ -0.4
DDR1-231	ENST00000417521	CADM3	Q8N126	398 aa		12.57	□□□□□ -0.4
DDR1-231	ENST00000417521	IL22RA2	Q969J5	263 aa		12.57	□□□□□ -0.4
DDR1-231	ENST00000417521	RRNAD1	Q96FB5	475 aa	Known RBP	12.57	□□□□□ -0.4
DDR1-231	ENST00000417521	PRR25	Q96S07	402 aa		12.57	□□□□□ -0.4
DDR1-231	ENST00000417521	B9D2	Q9BPU9	175 aa		12.57	□□□□□ -0.4
DDR1-231	ENST00000417521	ELOVL1	Q9BW60	279 aa		12.57	□□□□□ -0.4
DDR1-231	ENST00000417521	ANKRD34B	A5PLL1	514 aa		12.56	□□□□□ -0.4
DDR1-231	ENST00000417521	HMX3	A6NHT5	357 aa		12.56	□□□□□ -0.4
DDR1-231	ENST00000417521	CGB1	A6NKQ9	187 aa		12.56	□□□□□ -0.4
DDR1-231	ENST00000417521	RBMXL2	O75526	392 aa	Known RBP	12.56	□□□□□ -0.4
DDR1-231	ENST00000417521	RHOG	P84095	191 aa		12.56	□□□□□ -0.4
DDR1-231	ENST00000417521	KLF5	Q13887	457 aa	Predicted RBP	12.56	□□□□□ -0.4
DDR1-231	ENST00000417521		Q6ZRM9	215 aa		12.56	□□□□□ -0.4
DDR1-231	ENST00000417521	GPR146	Q96CH1	333 aa		12.56	□□□□□ -0.4
DDR1-231	ENST00000417521	FYTTD1	Q96QD9	318 aa	Known RBP	12.56	□□□□□ -0.4
DDR1-231	ENST00000417521	OR4C12	Q96R67	309 aa		12.56	□□□□□ -0.4
DDR1-231	ENST00000417521	COMMD5	Q9GZQ3	224 aa		12.56	□□□□□ -0.4
DDR1-231	ENST00000417521	ZNF257	Q9Y2Q1	563 aa		12.56	□□□□□ -0.4
DDR1-231	ENST00000417521		A0A0B4J293	547 aa		12.55	□□□□□ -0.4
DDR1-231	ENST00000417521	TEX50	A0A1B0GTY4	177 aa		12.55	□□□□□ -0.4
DDR1-231	ENST00000417521	C15orf61	A6NNL5	157 aa		12.55	□□□□□ -0.4
DDR1-231	ENST00000417521	NPIPB5	A8MRT5	1133 aa		12.55	□□□□□ -0.4
DDR1-231	ENST00000417521	PTTG1	O95997	202 aa		12.55	□□□□□ -0.4
DDR1-231	ENST00000417521	FGF2	P09038	288 aa		12.55	□□□□□ -0.4
DDR1-231	ENST00000417521	DEFA5	Q01523	94 aa		12.55	□□□□□ -0.4
DDR1-231	ENST00000417521	ATP5G2	Q06055	141 aa		12.55	□□□□□ -0.4
DDR1-231	ENST00000417521	CD69	Q07108	199 aa		12.55	□□□□□ -0.4
DDR1-231	ENST00000417521	LRTM2	Q8N967	370 aa		12.55	□□□□□ -0.4
DDR1-231	ENST00000417521	NECAP1	Q8NC96	275 aa		12.55	□□□□□ -0.4
DDR1-231	ENST00000417521	OR4A16	Q8NH70	328 aa		12.55	□□□□□ -0.4
DDR1-231	ENST00000417521	QTRT1	Q9BXR0	403 aa	Known RBP	12.55	□□□□□ -0.4
DDR1-231	ENST00000417521	TMEM14B	Q9NUH8	114 aa		12.55	□□□□□ -0.4
DDR1-231	ENST00000417521	PRND	Q9UKY0	176 aa		12.55	□□□□□ -0.4
DDR1-231	ENST00000417521	OR51B2	Q9Y5P1	312 aa		12.55	□□□□□ -0.4
DDR1-231	ENST00000417521		A0A0B4J2A0	478 aa		12.54	□□□□□ -0.4
DDR1-231	ENST00000417521	INMT-MINDY4	F8WBC2	141 aa		12.54	□□□□□ -0.4
DDR1-231	ENST00000417521	PRH1	P02810	166 aa		12.54	□□□□□ -0.4
DDR1-231	ENST00000417521	CRYGC	P07315	174 aa		12.54	□□□□□ -0.4
DDR1-231	ENST00000417521	TATDN3	Q17R31	274 aa		12.54	□□□□□ -0.4
DDR1-231	ENST00000417521	FAM209B	Q5JX69	171 aa		12.54	□□□□□ -0.4
DDR1-231	ENST00000417521	LSM10	Q969L4	123 aa	Known RBP	12.54	□□□□□ -0.4
DDR1-231	ENST00000417521	MARVELD1	Q9BSK0	173 aa		12.54	□□□□□ -0.4
DDR1-231	ENST00000417521	SHPK	Q9UHJ6	478 aa		12.54	□□□□□ -0.4
DDR1-231	ENST00000417521	KMT2C	Q8NEZ4	4911 aa	Known RBP	12.54	□□□□□ -0.4
DDR1-231	ENST00000417521	LY86	O95711	162 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	HOXB5	P09067	269 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	KLK9	Q2XQG4	91 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	NMS	Q5H8A3	153 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	FAM219A	Q8IW50	185 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	OR10W1	Q8NGF6	305 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	COQ8A	Q8NI60	647 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	ZNF431	Q8TF32	576 aa	Predicted RBP	12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	MITD1	Q8WV92	249 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	HINT2	Q9BX68	163 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	CACNG5	Q9UF02	275 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	KLK9	Q9UKQ9	250 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	ADAP1	O75689	374 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	DHFR	P00374	187 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	TRBV12-3	P01733	135 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	AREG	P15514	252 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	PSMB6	P28072	239 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	EXOSC2	Q13868	293 aa	Known RBP	12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	RPEL1	Q2QD12	228 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	OR9G4	Q8NGQ1	327 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	OR1L8	Q8NGR8	309 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	FKBP11	Q9NYL4	201 aa		12.53	□□□□□ -0.4
DDR1-231	ENST00000417521	DNAH9	Q9NYC9	4486 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	RYR3	Q15413	4870 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	DUXB	A0A1W2PPF3	345 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	ST8SIA3	O43173	380 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	OR2J3	O76001	311 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	IL5	P05113	134 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	TRAPPC2	P0DI81	140 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	TRAPPC2B	P0DI82	140 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	CTRB1	P17538	263 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	SYNJ2BP	P57105	145 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	RGS21	Q2M5E4	152 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	C15orf32	Q32M92	178 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	SPINK9	Q5DT21	86 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	GGNBP1	Q5YKI7	109 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	CTRB2	Q6GPI1	263 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	C19orf35	Q6ZS72	473 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	OR5B3	Q8NH48	314 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	FANCD2OS	Q96PS1	177 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	SRSF8	Q9BRL6	282 aa	Known RBP	12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	NDUFA4L2	Q9NRX3	87 aa		12.52	□□□□□ -0.41
DDR1-231	ENST00000417521	IGLC7	A0M8Q6	106 aa		12.51	□□□□□ -0.41
DDR1-231	ENST00000417521	NXPH3	O95157	252 aa		12.51	□□□□□ -0.41
DDR1-231	ENST00000417521	IGLV1-51	P01701	117 aa		12.51	□□□□□ -0.41
DDR1-231	ENST00000417521	REG1A	P05451	166 aa		12.51	□□□□□ -0.41
DDR1-231	ENST00000417521	SULT1A3	P0DMM9	295 aa		12.51	□□□□□ -0.41

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