RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 RBMY1EA6NEQ0 496 aaKnown RBP7.1□□□□□ -1.27
SCN9A-203ENST00000409672 ATP5LO75964 103 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 RBMY1DP0C7P1 496 aaKnown RBP7.1□□□□□ -1.27
SCN9A-203ENST00000409672 RBMY1A1P0DJD3 496 aaKnown RBP7.1□□□□□ -1.27
SCN9A-203ENST00000409672 RBMY1CP0DJD4 496 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 ZP3P21754 424 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 ACP7Q6ZNF0 438 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 SELENOHQ8IZQ5 122 aaKnown RBP7.1□□□□□ -1.27
SCN9A-203ENST00000409672 EP300Q09472 2414 aaPredicted RBP7.1□□□□□ -1.27
SCN9A-203ENST00000409672 IGFBP2P18065 325 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 SRIP30626 198 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 HBBP68871 147 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 TNFRSF9Q07011 255 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 SOD3P08294 240 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 FOXF2Q12947 444 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 C21orf62Q9NYP8 219 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 RHOGP84095 191 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 UQCC3Q6UW78 93 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 NABP2Q9BQ15 211 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 FOXD3Q9UJU5 478 aaPredicted RBP7.1□□□□□ -1.27
SCN9A-203ENST00000409672 H0Y980 276 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 CGAP01215 116 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 HLA-DRB1P01911 266 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 KCNS1Q96KK3 526 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 SPRR3Q9UBC9 169 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 LTBP4Q8N2S1 1624 aa7.1□□□□□ -1.27
SCN9A-203ENST00000409672 TRGV1A0A0A0MS02 117 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 C19orf67A6NJJ6 358 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 HSPE1P61604 102 aaKnown RBP7.09□□□□□ -1.27
SCN9A-203ENST00000409672 GNG5P63218 68 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 TMEM136Q6ZRR5 245 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 A0A096LPF7 62 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 CDC42EP3Q9UKI2 254 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 ELOA3CA0A087WX78 387 aaPredicted RBP7.09□□□□□ -1.27
SCN9A-203ENST00000409672 PRB1P04280 392 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 GLRXP35754 106 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 ZNF525Q8N782 197 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 GATD1Q8NB37 220 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 WDR34Q96EX3 536 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 TANC2Q9HCD6 1990 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 C8orf88P0DMB2 117 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 PRELID3AQ96N28 172 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 SLIRPQ9GZT3 109 aaKnown RBP7.09□□□□□ -1.27
SCN9A-203ENST00000409672 PCNX1Q96RV3 2341 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 ZNF729A6NN14 1252 aaPredicted RBP7.09□□□□□ -1.27
SCN9A-203ENST00000409672 ASAH2BP0C7U1 165 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 NCOR1O75376 2440 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 SLC25A47Q6Q0C1 308 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 TCF24Q7RTU0 167 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 TCF19Q9Y242 345 aa7.09□□□□□ -1.27
SCN9A-203ENST00000409672 ZNF79Q15937 498 aa7.09□□□□□ -1.28
SCN9A-203ENST00000409672 GPR132Q9UNW8 380 aa7.09□□□□□ -1.28
SCN9A-203ENST00000409672 C17orf100A8MU93 164 aa7.09□□□□□ -1.28
SCN9A-203ENST00000409672 HOGA1Q86XE5 327 aa7.09□□□□□ -1.28
SCN9A-203ENST00000409672 COPS9Q8WXC6 57 aa7.09□□□□□ -1.28
SCN9A-203ENST00000409672 ZNF837Q96EG3 531 aaPredicted RBP7.09□□□□□ -1.28
SCN9A-203ENST00000409672 DTX2Q86UW9 622 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 WFDC6Q9BQY6 131 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 SRCAPQ6ZRS2 3230 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 JOSD1Q15040 202 aaPredicted RBP7.08□□□□□ -1.28
SCN9A-203ENST00000409672 TAF15Q92804 592 aaKnown RBP eCLIP7.08□□□□□ -1.28
SCN9A-203ENST00000409672 ASCL2Q99929 193 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 WNK3Q9BYP7 1800 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 HOXA6P31267 233 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 CENPWQ5EE01 88 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 SP7Q8TDD2 431 aaPredicted RBP7.08□□□□□ -1.28
SCN9A-203ENST00000409672 LINC00477Q96M19 166 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 MBD3L4A6NDZ8 208 aaPredicted RBP7.08□□□□□ -1.28
SCN9A-203ENST00000409672 MBD3L3A6NE82 208 aaPredicted RBP7.08□□□□□ -1.28
SCN9A-203ENST00000409672 MBD3L5A6NJ08 208 aaPredicted RBP7.08□□□□□ -1.28
SCN9A-203ENST00000409672 PTGDSP41222 190 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 MBD3L2Q8NHZ7 208 aaPredicted RBP7.08□□□□□ -1.28
SCN9A-203ENST00000409672 TGIF2-C20orf24A0A0A6YYL0 155 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 FABP2P12104 132 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 RPL15P61313 204 aaKnown RBP7.08□□□□□ -1.28
SCN9A-203ENST00000409672 SAPCD1Q5SSQ6 148 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 SAMD13Q5VXD3 122 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 EDA2RQ9HAV5 297 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 C4orf51C9J302 202 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 H7C1H1 209 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 SEC11BP0C7V7 166 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 TFF3Q07654 80 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 SIRT4Q9Y6E7 314 aaPredicted RBP7.08□□□□□ -1.28
SCN9A-203ENST00000409672 CNOT1A5YKK6 2376 aaKnown RBP7.08□□□□□ -1.28
SCN9A-203ENST00000409672 TRAV2A0A0B4J234 112 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 C7orf77A4D0Y5 90 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 C1QTNF9BB2RNN3 333 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 C1QTNF9P0C862 333 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 ZP1P60852 638 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 OR11H4Q8NGC9 324 aa7.08□□□□□ -1.28
SCN9A-203ENST00000409672 ZNF625Q96I27 306 aaPredicted RBP7.08□□□□□ -1.28
SCN9A-203ENST00000409672 C7orf66A4D0T2 115 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 H3BUX3 64 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 SLC17A3O00476 420 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 TRGC2P03986 189 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 RUSC1-AS1Q66K80 236 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 OR10AG1Q8NH19 301 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 NPIPB8E9PQR5 432 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 NPIPB9F8W1W9 429 aa7.07□□□□□ -1.28
SCN9A-203ENST00000409672 HOXA3O43365 443 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms