RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 NPIPB5A8MRT5 1133 aa12.8□□□□□ -0.36
CXCL1-201ENST00000395761 ADAP1O75689 374 aa12.8□□□□□ -0.36
CXCL1-201ENST00000395761 CRYGCP07315 174 aa12.8□□□□□ -0.36
CXCL1-201ENST00000395761 HOXB5P09067 269 aa12.8□□□□□ -0.36
CXCL1-201ENST00000395761 LGALS1P09382 135 aaKnown RBP12.8□□□□□ -0.36
CXCL1-201ENST00000395761 TRAPPC2P0DI81 140 aa12.8□□□□□ -0.36
CXCL1-201ENST00000395761 TRAPPC2BP0DI82 140 aa12.8□□□□□ -0.36
CXCL1-201ENST00000395761 CD33P20138 364 aa12.8□□□□□ -0.36
CXCL1-201ENST00000395761 UXS1Q8NBZ7 420 aa12.8□□□□□ -0.36
CXCL1-201ENST00000395761 OR1N2Q8NGR9 330 aa12.8□□□□□ -0.36
CXCL1-201ENST00000395761 HINT2Q9BX68 163 aa12.8□□□□□ -0.36
CXCL1-201ENST00000395761 ZNF257Q9Y2Q1 563 aa12.8□□□□□ -0.36
CXCL1-201ENST00000395761 TRBV9A0A0B4J1U6 114 aa12.79□□□□□ -0.36
CXCL1-201ENST00000395761 C13orf42A0A1B0GVH6 325 aa12.79□□□□□ -0.36
CXCL1-201ENST00000395761 C15orf61A6NNL5 157 aa12.79□□□□□ -0.36
CXCL1-201ENST00000395761 SSNA1O43805 119 aa12.79□□□□□ -0.36
CXCL1-201ENST00000395761 CTRB1P17538 263 aa12.79□□□□□ -0.36
CXCL1-201ENST00000395761 RHOGP84095 191 aa12.79□□□□□ -0.36
CXCL1-201ENST00000395761 WT1-ASQ06250 92 aa12.79□□□□□ -0.36
CXCL1-201ENST00000395761 FHL3Q13643 280 aa12.79□□□□□ -0.36
CXCL1-201ENST00000395761 AARDQ4LEZ3 155 aa12.79□□□□□ -0.36
CXCL1-201ENST00000395761 CTRB2Q6GPI1 263 aa12.79□□□□□ -0.36
CXCL1-201ENST00000395761 Q6ZRM9 215 aa12.79□□□□□ -0.36
CXCL1-201ENST00000395761 RNASE11Q8TAA1 199 aaKnown RBP12.79□□□□□ -0.36
CXCL1-201ENST00000395761 FANCD2OSQ96PS1 177 aa12.79□□□□□ -0.36
CXCL1-201ENST00000395761 FKBP11Q9NYL4 201 aa12.79□□□□□ -0.36
CXCL1-201ENST00000395761 IGHV4OR15-8A0A075B7B6 117 aa12.78□□□□□ -0.36
CXCL1-201ENST00000395761 A0A087WW49 117 aa12.78□□□□□ -0.36
CXCL1-201ENST00000395761 A0A0G2JLM5 398 aa12.78□□□□□ -0.36
CXCL1-201ENST00000395761 G3V4G9 280 aa12.78□□□□□ -0.36
CXCL1-201ENST00000395761 PITX3O75364 302 aa12.78□□□□□ -0.36
CXCL1-201ENST00000395761 OR2J3O76001 311 aa12.78□□□□□ -0.36
CXCL1-201ENST00000395761 OR13C7P0DN81 318 aa12.78□□□□□ -0.36
CXCL1-201ENST00000395761 IGLL1P15814 213 aa12.78□□□□□ -0.36
CXCL1-201ENST00000395761 ZNF616Q08AN1 781 aa12.78□□□□□ -0.36
CXCL1-201ENST00000395761 OXLD1Q5BKU9 147 aa12.78□□□□□ -0.36
CXCL1-201ENST00000395761 ZNF429Q86V71 674 aa12.78□□□□□ -0.36
CXCL1-201ENST00000395761 C1QL4Q86Z23 238 aa12.78□□□□□ -0.36
CXCL1-201ENST00000395761 USMG5Q96IX5 58 aa12.78□□□□□ -0.36
CXCL1-201ENST00000395761 SRSF8Q9BRL6 282 aaKnown RBP12.78□□□□□ -0.36
CXCL1-201ENST00000395761 MED28Q9H204 178 aa12.78□□□□□ -0.36
CXCL1-201ENST00000395761 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.78□□□□□ -0.36
CXCL1-201ENST00000395761 CACFD1Q9UGQ2 172 aa12.78□□□□□ -0.36
CXCL1-201ENST00000395761 ANKRD34BA5PLL1 514 aa12.77□□□□□ -0.37
CXCL1-201ENST00000395761 SULT1A3P0DMM9 295 aa12.77□□□□□ -0.37
CXCL1-201ENST00000395761 SULT1A4P0DMN0 295 aa12.77□□□□□ -0.37
CXCL1-201ENST00000395761 HSPE1P61604 102 aaKnown RBP12.77□□□□□ -0.37
CXCL1-201ENST00000395761 RRAS2P62070 204 aaPredicted RBP12.77□□□□□ -0.37
CXCL1-201ENST00000395761 ATP5G2Q06055 141 aa12.77□□□□□ -0.37
CXCL1-201ENST00000395761 SMCO1Q147U7 214 aa12.77□□□□□ -0.37
CXCL1-201ENST00000395761 NECAP1Q8NC96 275 aa12.77□□□□□ -0.37
CXCL1-201ENST00000395761 OR5B3Q8NH48 314 aa12.77□□□□□ -0.37
CXCL1-201ENST00000395761 DPF1Q92782 380 aa12.77□□□□□ -0.37
CXCL1-201ENST00000395761 DMRT1Q9Y5R6 373 aa12.77□□□□□ -0.37
CXCL1-201ENST00000395761 NOTCH1P46531 2555 aa12.77□□□□□ -0.37
CXCL1-201ENST00000395761 NOTCH3Q9UM47 2321 aa12.77□□□□□ -0.37
CXCL1-201ENST00000395761 FAM223BA6NKX1 122 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 MPTX1A8MV57 137 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 LINC01619G3V211 115 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 NDUFB8O95169 186 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 TRBV12-3P01733 135 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 HSPB1P04792 205 aaKnown RBP12.76□□□□□ -0.37
CXCL1-201ENST00000395761 DEFA4P12838 97 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 SLURP1P55000 103 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 KLK9Q2XQG4 91 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 SPINK9Q5DT21 86 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 SAMD5Q5TGI4 173 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 ZNF343Q6P1L6 599 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 GSG1LQ6UXU4 331 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 FAM223AQ8IWN6 122 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 OR52E5Q8NH55 327 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 OR10C1Q96KK4 312 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 C2orf50Q96LR7 162 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 CACNG5Q9UF02 275 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 FBXL7Q9UJT9 491 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 KLK9Q9UKQ9 250 aa12.76□□□□□ -0.37
CXCL1-201ENST00000395761 IGLV11-55A0A075B6I3 123 aa12.75□□□□□ -0.37
CXCL1-201ENST00000395761 ST8SIA3O43173 380 aa12.75□□□□□ -0.37
CXCL1-201ENST00000395761 OR8U8P0C7N1 319 aa12.75□□□□□ -0.37
CXCL1-201ENST00000395761 MFAP2P55001 183 aa12.75□□□□□ -0.37
CXCL1-201ENST00000395761 IL15RAQ13261 267 aa12.75□□□□□ -0.37
CXCL1-201ENST00000395761 FCN2Q15485 313 aa12.75□□□□□ -0.37
CXCL1-201ENST00000395761 C15orf32Q32M92 178 aa12.75□□□□□ -0.37
CXCL1-201ENST00000395761 PDLIM3Q53GG5 364 aaPredicted RBP12.75□□□□□ -0.37
CXCL1-201ENST00000395761 THOC7Q6I9Y2 204 aaKnown RBP12.75□□□□□ -0.37
CXCL1-201ENST00000395761 HSD17B13Q7Z5P4 300 aaPredicted RBP12.75□□□□□ -0.37
CXCL1-201ENST00000395761 CHAC2Q8WUX2 184 aa12.75□□□□□ -0.37
CXCL1-201ENST00000395761 MGAT4CQ9UBM8 478 aa12.75□□□□□ -0.37
CXCL1-201ENST00000395761 S4R3C0 116 aa12.75□□□□□ -0.37
CXCL1-201ENST00000395761 MEGF8Q7Z7M0 2845 aa12.75□□□□□ -0.37
CXCL1-201ENST00000395761 C5orf51A6NDU8 294 aa12.74□□□□□ -0.37
CXCL1-201ENST00000395761 FAM90A26D6RGX4 464 aa12.74□□□□□ -0.37
CXCL1-201ENST00000395761 CCSO14618 274 aa12.74□□□□□ -0.37
CXCL1-201ENST00000395761 GOSR2O14653 212 aa12.74□□□□□ -0.37
CXCL1-201ENST00000395761 CYCSP99999 105 aaKnown RBP12.74□□□□□ -0.37
CXCL1-201ENST00000395761 PRCDQ00LT1 54 aa12.74□□□□□ -0.37
CXCL1-201ENST00000395761 ID3Q02535 119 aa12.74□□□□□ -0.37
CXCL1-201ENST00000395761 EXOSC2Q13868 293 aaKnown RBP12.74□□□□□ -0.37
CXCL1-201ENST00000395761 IAH1Q2TAA2 248 aaPredicted RBP12.74□□□□□ -0.37
CXCL1-201ENST00000395761 ZBTB8BQ8NAP8 495 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms