RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 IGHG2P01859 326 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 SRSF3P84103 164 aaKnown RBP3.38□□□□□ -1.87
HERC4-204ENST00000395198 ARL16Q0P5N6 197 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 RIGQ13278 110 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 DEFB133Q30KQ1 61 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 TICRRQ7Z2Z1 1910 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 OR4C16Q8NGL9 310 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 PHF3Q92576 2039 aaKnown RBP3.38□□□□□ -1.87
HERC4-204ENST00000395198 NEURL3Q96EH8 262 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 TCEAL2Q9H3H9 227 aaPredicted RBP3.38□□□□□ -1.87
HERC4-204ENST00000395198 RPRMQ9NS64 109 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 SSC5DA1L4H1 1573 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 K7EP34 96 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 NDUFS7O75251 213 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 KLF7O75840 302 aaPredicted RBP3.38□□□□□ -1.87
HERC4-204ENST00000395198 MYCNOSP40205 109 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 PLGLB1Q02325 96 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 ARFRP1Q13795 201 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 ALG10Q5BKT4 473 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 DGAT2L6Q6ZPD8 337 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 Q6ZWC4 215 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 KCNRGQ8N5I3 272 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 ZNF491Q8N8L2 437 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 MYEOVQ96EZ4 313 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 BORCS8Q96FH0 119 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 PEBP4Q96S96 227 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 CXCL16Q9H2A7 254 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 TMEM45AQ9NWC5 275 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 ZNF318Q5VUA4 2279 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 SCN2AQ99250 2005 aa3.38□□□□□ -1.87
HERC4-204ENST00000395198 WDFY3Q8IZQ1 3526 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 TRAV5A0A0B4J249 113 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 IGKV1D-13A0A0B4J2D9 117 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 SNURFLB1AK76 121 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 IGKV1-13P0DP09 117 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 NFYAP23511 347 aaPredicted RBP3.37□□□□□ -1.87
HERC4-204ENST00000395198 OR2T2Q6IF00 324 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 ZNF773Q6PK81 442 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 TCF23Q7RTU1 214 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 LINC00311Q8N616 119 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 NEXN-AS1Q8NBZ9 246 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 ZNF563Q8TA94 476 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 IGFBPL1Q8WX77 278 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 TMEM18Q96B42 140 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 TAAR2Q9P1P5 351 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 MYO5AQ9Y4I1 1855 aaKnown RBP3.37□□□□□ -1.87
HERC4-204ENST00000395198 A0A1B0GWB2 263 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 CD300LBA8K4G0 201 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 LYRM9A8MSI8 78 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 H3BP45 60 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 J3QR89 54 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 NDUFC2O95298 119 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 SLC2A10O95528 541 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 LINC00032P0C843 101 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 TRGC1P0CF51 173 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 P0DMU3 169 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 FAM231AP0DMU4 169 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 FAM231CP0DMU5 169 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 IFITM1P13164 125 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 IL9P15248 144 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 GDF5P43026 501 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 C1DQ13901 141 aaKnown RBP3.37□□□□□ -1.87
HERC4-204ENST00000395198 OR7A5Q15622 319 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 ZNF660Q6AZW8 331 aaPredicted RBP3.37□□□□□ -1.87
HERC4-204ENST00000395198 TRMT10BQ6PF06 316 aaKnown RBP3.37□□□□□ -1.87
HERC4-204ENST00000395198 ZNF493Q6ZR52 646 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 RPS19BP1Q86WX3 136 aaKnown RBP3.37□□□□□ -1.87
HERC4-204ENST00000395198 RFLNBQ8N5W9 214 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 LY6G5BQ8NDX9 201 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 OR1J1Q8NGS3 322 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 NT5CQ8TCD5 201 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 FGF14Q92915 247 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 C4orf45Q96LM5 186 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 AMELYQ99218 206 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 PBOV1Q9GZY1 135 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 CACFD1Q9UGQ2 172 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 IGHV2-26A0A0B4J1V2 119 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 A0A1B0GVT2 93 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 ZNF727A8MUV8 499 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 BRWD1-AS2P59051 145 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 PPP1CAP62136 330 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 PAX8Q06710 450 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 CD226Q15762 336 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 PIK3CD-AS1Q5SR53 167 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 STPG1Q5TH74 334 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 SLC22A24Q8N4F4 322 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 SLC25A40Q8TBP6 338 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 ELSPBP1Q96BH3 223 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 TNFRSF12AQ9NP84 129 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 PCTPQ9UKL6 214 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 ZNF860A6NHJ4 632 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 FAM220BPB1ANY3 271 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 RER1O15258 196 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 SRP14P37108 136 aaKnown RBP3.37□□□□□ -1.87
HERC4-204ENST00000395198 FOLR3P41439 243 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 GP2P55259 537 aaKnown RBP3.37□□□□□ -1.87
HERC4-204ENST00000395198 TMEM183BQ1AE95 376 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 TMEM179BQ7Z7N9 219 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 VOPP1Q96AW1 172 aa3.37□□□□□ -1.87
HERC4-204ENST00000395198 UQCR10Q9UDW1 63 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms