RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 SMR3AQ99954 134 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 NAA60Q9H7X0 242 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 SLC25A10Q9UBX3 287 aaPredicted RBP6.78□□□□□ -1.32
LIMS1-203ENST00000393310 OBSL1O75147 1896 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 PLXNB3Q9ULL4 1909 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 DUXBA0A1W2PPF3 345 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 ODAMA1E959 279 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 G3V4G9 280 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 SLC25A26Q70HW3 274 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 ZNF114Q8NC26 417 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 GPR82Q96P67 336 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 SDHCQ99643 169 aaPredicted RBP6.78□□□□□ -1.32
LIMS1-203ENST00000393310 EMC6Q9BV81 110 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 M0R135 149 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 GPR137BO60478 399 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 SLC25A4P12235 298 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 COX5AP20674 150 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 TMEM97Q5BJF2 176 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 STHQ8IWL8 128 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 GPR32P1Q8NGA4 272 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 ZNF799Q96GE5 643 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 NDFIP1Q9BT67 221 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 MAGIXQ9H6Y5 334 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 ST20Q9HBF5 79 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 ZNF286AQ9HBT8 521 aa6.78□□□□□ -1.32
LIMS1-203ENST00000393310 PLXNA2O75051 1894 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 TMEM89A2RUT3 159 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 SYNGR1O43759 233 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 P01737 135 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 ID3Q02535 119 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 S1PR3Q99500 378 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 SPIN2AQ99865 258 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 SPIN2BQ9BPZ2 258 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 AURKAIP1Q9NWT8 199 aaPredicted RBP6.77□□□□□ -1.33
LIMS1-203ENST00000393310 TRAV24A0A0B4J272 114 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 LOC102723971A0A1B0GUV8 181 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 FCN1O00602 326 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 ZNF253O75346 499 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 AMY2AP04746 511 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 CXCL2P19875 107 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 MPZP25189 248 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 MRPS16Q9Y3D3 137 aaKnown RBP6.77□□□□□ -1.33
LIMS1-203ENST00000393310 LYL1P12980 280 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 RAB40BQ12829 278 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 LEG1Q6P5S2 330 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 MOB3BQ86TA1 216 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 TVP23BQ9NYZ1 205 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 CACFD1Q9UGQ2 172 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 ZNF407Q9C0G0 2248 aa6.77□□□□□ -1.33
LIMS1-203ENST00000393310 OR2T8A6NH00 312 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 RNASE1P07998 156 aaKnown RBP6.76□□□□□ -1.33
LIMS1-203ENST00000393310 SMIM13P0DJ93 91 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 ZNF90Q03938 601 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 CATR1Q13166 79 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 FAM106AQ4KMX7 169 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 RUSC1-AS1Q66K80 236 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 ZIC4Q8N9L1 334 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 OR11H4Q8NGC9 324 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 DNAJC30Q96LL9 226 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 GGTLC1Q9BX51 225 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 SLC25A19Q9HC21 320 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 SMPXQ9UHP9 88 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 CHST2Q9Y4C5 530 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 FREM1Q5H8C1 2179 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 ABCA1O95477 2261 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 C9JAW5 83 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 ZNF878C9JN71 531 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 H3BVH4 76 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 CELA3BP08861 270 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 DANCRP0C864 163 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 HTR6P50406 440 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 GLDNQ6ZMI3 551 aaPredicted RBP6.76□□□□□ -1.33
LIMS1-203ENST00000393310 DMBX1Q8NFW5 382 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 OR51E1Q8TCB6 317 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 SMIM7Q9BQ49 75 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 MRPL20Q9BYC9 149 aaKnown RBP6.76□□□□□ -1.33
LIMS1-203ENST00000393310 ERG28Q9UKR5 140 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 CES1P1Q9UKY3 287 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 HIGD1AQ9Y241 93 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 ETV7Q9Y603 341 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 MAST4O15021 2626 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 PSPNO60542 156 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 PYURFQ96I23 114 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 TSSK6Q9BXA6 273 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 VPREB3Q9UKI3 123 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 PTPRDP23468 1912 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 IGHV1-18A0A0C4DH31 117 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 PLA2G10O15496 165 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 NDUFB8O95169 186 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 MRPL3P09001 348 aaKnown RBP6.76□□□□□ -1.33
LIMS1-203ENST00000393310 EVI2AP22794 236 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 FOXA1P55317 472 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 C6orf226Q5I0X4 101 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 RNF144BQ7Z419 303 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 OR1L8Q8NGR8 309 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 WWC2-AS2Q96NR7 200 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 PSORS1C1Q9UIG5 152 aa6.76□□□□□ -1.33
LIMS1-203ENST00000393310 TMEM131Q92545 1883 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 DOCK10Q96BY6 2186 aa6.75□□□□□ -1.33
LIMS1-203ENST00000393310 FAM181BA6NEQ2 426 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms