RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 DPRXA6NFQ7 191 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 C15orf61A6NNL5 157 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 CECR9P0C854 216 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 PCP4P48539 62 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 PRR20EP86478 221 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 PRR20CP86479 221 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 PRR20DP86480 221 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 PRR20BP86481 221 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 PRR20AP86496 221 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 SLAQ13239 276 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 AARDQ4LEZ3 155 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 DUX4L9Q6RFH8 374 aaPredicted RBP11.46□□□□□ -0.57
CCDC57-203ENST00000392343 NIT1Q86X76 327 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 OR52E5Q8NH55 327 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 TRAV9-1A0A075B6T8 112 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 ZNF324O75467 553 aaPredicted RBP11.46□□□□□ -0.57
CCDC57-203ENST00000392343 IGHV3-48P01763 117 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 OR5G3P0C626 314 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 IGLC2P0DOY2 106 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 IGLC3P0DOY3 106 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 HNRNPA3P51991 378 aaKnown RBP11.46□□□□□ -0.57
CCDC57-203ENST00000392343 MORN5Q5VZ52 161 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 LYG1Q8N1E2 194 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 OR9G1Q8NH87 305 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 TSKUQ8WUA8 353 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 SPRY4Q9C004 299 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 TP73-AS1Q9UF72 201 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 ZFP30Q9Y2G7 519 aa11.46□□□□□ -0.57
CCDC57-203ENST00000392343 SAA2-SAA4A0A096LPE2 208 aa11.46□□□□□ -0.58
CCDC57-203ENST00000392343 LINC00614P0C842 121 aa11.46□□□□□ -0.58
CCDC57-203ENST00000392343 SAA2P0DJI9 122 aaPredicted RBP11.46□□□□□ -0.58
CCDC57-203ENST00000392343 AREGP15514 252 aa11.46□□□□□ -0.58
CCDC57-203ENST00000392343 HOXC12P31275 282 aa11.46□□□□□ -0.58
CCDC57-203ENST00000392343 GPR6P46095 362 aaPredicted RBP11.46□□□□□ -0.58
CCDC57-203ENST00000392343 CT45A1Q5HYN5 189 aa11.46□□□□□ -0.58
CCDC57-203ENST00000392343 MDS2Q8NDY4 140 aa11.46□□□□□ -0.58
CCDC57-203ENST00000392343 CT45A3Q8NHU0 189 aa11.46□□□□□ -0.58
CCDC57-203ENST00000392343 SGK494Q96LW2 274 aa11.46□□□□□ -0.58
CCDC57-203ENST00000392343 MAP1BP46821 2468 aaKnown RBP11.45□□□□□ -0.58
CCDC57-203ENST00000392343 DSCAMO60469 2012 aa11.45□□□□□ -0.58
CCDC57-203ENST00000392343 J3QW42 95 aa11.45□□□□□ -0.58
CCDC57-203ENST00000392343 CD46P15529 392 aa11.45□□□□□ -0.58
CCDC57-203ENST00000392343 USF1P22415 310 aaPredicted RBP11.45□□□□□ -0.58
CCDC57-203ENST00000392343 HSPE1P61604 102 aaKnown RBP11.45□□□□□ -0.58
CCDC57-203ENST00000392343 SLC45A2Q9UMX9 530 aa11.45□□□□□ -0.58
CCDC57-203ENST00000392343 LAMTOR2Q9Y2Q5 125 aa11.45□□□□□ -0.58
CCDC57-203ENST00000392343 OR51B2Q9Y5P1 312 aa11.45□□□□□ -0.58
CCDC57-203ENST00000392343 ROS1P08922 2347 aa11.45□□□□□ -0.58
CCDC57-203ENST00000392343 LAMTOR5O43504 91 aa11.45□□□□□ -0.58
CCDC57-203ENST00000392343 IGLV2-8P01709 118 aa11.45□□□□□ -0.58
CCDC57-203ENST00000392343 PRR27Q6MZM9 219 aa11.45□□□□□ -0.58
CCDC57-203ENST00000392343 INO80CQ6PI98 192 aaPredicted RBP11.45□□□□□ -0.58
CCDC57-203ENST00000392343 OR4S2Q8NH73 311 aa11.45□□□□□ -0.58
CCDC57-203ENST00000392343 SSBP4Q9BWG4 385 aaPredicted RBP11.45□□□□□ -0.58
CCDC57-203ENST00000392343 CHODLQ9H9P2 273 aa11.45□□□□□ -0.58
CCDC57-203ENST00000392343 UQCR10Q9UDW1 63 aa11.45□□□□□ -0.58
CCDC57-203ENST00000392343 JPT1Q9UK76 154 aa11.45□□□□□ -0.58
CCDC57-203ENST00000392343 APCSP02743 223 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 ACP1P24666 158 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 MSMPQ1L6U9 139 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 VHLLQ6RSH7 139 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 UNQ5815/PRO19632Q6UWF5 114 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 ERASQ7Z444 233 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 LHFPL4Q7Z7J7 247 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 BORCS7Q96B45 105 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 CLEC7AQ9BXN2 247 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 ZNF355PQ9NSJ1 428 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 SLC35D1Q9NTN3 355 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 CALYQ9NYX4 217 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 IDI2-AS1Q9NZ38 188 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 CBY1Q9Y3M2 126 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 ZNF891A8MT65 544 aaPredicted RBP11.44□□□□□ -0.58
CCDC57-203ENST00000392343 J3QR06 171 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 AMY1AP04745 511 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 WDR73Q6P4I2 378 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 ZNF439Q8NDP4 499 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 DEFB108BQ8NET1 73 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 OR10W1Q8NGF6 305 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 DDB2Q92466 427 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 PLXNB1O43157 2135 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 DMXL2Q8TDJ6 3036 aa11.44□□□□□ -0.58
CCDC57-203ENST00000392343 TRBV9A0A0B4J1U6 114 aa11.43□□□□□ -0.58
CCDC57-203ENST00000392343 A0A1W2PN81 502 aa11.43□□□□□ -0.58
CCDC57-203ENST00000392343 FAM90A9PA6NNJ1 464 aa11.43□□□□□ -0.58
CCDC57-203ENST00000392343 IGKV1-16P04430 117 aa11.43□□□□□ -0.58
CCDC57-203ENST00000392343 PRRX1P54821 245 aa11.43□□□□□ -0.58
CCDC57-203ENST00000392343 TNXAQ16473 311 aa11.43□□□□□ -0.58
CCDC57-203ENST00000392343 Q56UQ5 140 aa11.43□□□□□ -0.58
CCDC57-203ENST00000392343 OR10J3Q5JRS4 329 aa11.43□□□□□ -0.58
CCDC57-203ENST00000392343 MOGAT3Q86VF5 341 aa11.43□□□□□ -0.58
CCDC57-203ENST00000392343 GCSAMQ8N6F7 178 aa11.43□□□□□ -0.58
CCDC57-203ENST00000392343 NEUROG1Q92886 237 aa11.43□□□□□ -0.58
CCDC57-203ENST00000392343 LY96Q9Y6Y9 160 aa11.43□□□□□ -0.58
CCDC57-203ENST00000392343 KALRNO60229 2985 aa11.43□□□□□ -0.58
CCDC57-203ENST00000392343 TRGV8A0A0C4DH27 118 aa11.43□□□□□ -0.58
CCDC57-203ENST00000392343 Q6ZT83 130 aa11.43□□□□□ -0.58
CCDC57-203ENST00000392343 MRPL52Q86TS9 123 aaKnown RBP11.43□□□□□ -0.58
CCDC57-203ENST00000392343 RND1Q92730 232 aa11.43□□□□□ -0.58
CCDC57-203ENST00000392343 TMEM14BQ9NUH8 114 aa11.43□□□□□ -0.58
CCDC57-203ENST00000392343 PPP1R14DQ9NXH3 145 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms