RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 NANOGP1Q8N7R0 232 aa6.91□□□□□ -1.3
IFT88-203ENST00000389373 DUSP18Q8NEJ0 188 aa6.91□□□□□ -1.3
IFT88-203ENST00000389373 DMBX1Q8NFW5 382 aa6.91□□□□□ -1.3
IFT88-203ENST00000389373 ST8SIA2Q92186 375 aa6.91□□□□□ -1.3
IFT88-203ENST00000389373 DGCR14Q96DF8 476 aaKnown RBP6.91□□□□□ -1.3
IFT88-203ENST00000389373 QTRT1Q9BXR0 403 aaKnown RBP6.91□□□□□ -1.3
IFT88-203ENST00000389373 PLCXD1Q9NUJ7 323 aa6.91□□□□□ -1.3
IFT88-203ENST00000389373 ELF5Q9UKW6 265 aaPredicted RBP6.91□□□□□ -1.3
IFT88-203ENST00000389373 PKD1P98161 4303 aa6.9□□□□□ -1.3
IFT88-203ENST00000389373 HSPG2P98160 4391 aa6.9□□□□□ -1.3
IFT88-203ENST00000389373 TEX50A0A1B0GTY4 177 aa6.9□□□□□ -1.3
IFT88-203ENST00000389373 K7EIM0 57 aa6.9□□□□□ -1.3
IFT88-203ENST00000389373 MFNGO00587 321 aa6.9□□□□□ -1.3
IFT88-203ENST00000389373 IGHV3-48P01763 117 aa6.9□□□□□ -1.3
IFT88-203ENST00000389373 HIST1H1DP16402 221 aaKnown RBP6.9□□□□□ -1.3
IFT88-203ENST00000389373 WT1-ASQ06250 92 aa6.9□□□□□ -1.3
IFT88-203ENST00000389373 EIF4EBP1Q13541 118 aaPredicted RBP6.9□□□□□ -1.3
IFT88-203ENST00000389373 SSX1Q16384 188 aa6.9□□□□□ -1.3
IFT88-203ENST00000389373 ACTL10Q5JWF8 245 aa6.9□□□□□ -1.3
IFT88-203ENST00000389373 UBE2UQ5VVX9 321 aa6.9□□□□□ -1.3
IFT88-203ENST00000389373 ZNF66Q6ZN08 573 aa6.9□□□□□ -1.3
IFT88-203ENST00000389373 STXBP6Q8NFX7 210 aa6.9□□□□□ -1.3
IFT88-203ENST00000389373 SRSF8Q9BRL6 282 aaKnown RBP6.9□□□□□ -1.3
IFT88-203ENST00000389373 CCL28Q9NRJ3 127 aa6.9□□□□□ -1.3
IFT88-203ENST00000389373 FKBP14Q9NWM8 211 aa6.9□□□□□ -1.3
IFT88-203ENST00000389373 F11RQ9Y624 299 aaKnown RBP6.9□□□□□ -1.3
IFT88-203ENST00000389373 EPM2AB3EWF7 344 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 SULT1C2O00338 296 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 CD5P06127 495 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 CTXN2P0C2S0 81 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 ZNF688P0C7X2 276 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 NQO2P16083 231 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 HSPA13P48723 471 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 MFAP4P55083 255 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 RNF212Q495C1 297 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 SPATA12Q7Z6I5 190 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 BPIFB6Q8NFQ5 453 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 OR1L8Q8NGR8 309 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 SECTM1Q8WVN6 248 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 SLC25A46Q96AG3 418 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 MISP3Q96FF7 219 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 ZNF414Q96IQ9 312 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 OR10C1Q96KK4 312 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 ATP6V0BQ99437 205 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 GINS3Q9BRX5 216 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 TMEM140Q9NV12 185 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 TMED3Q9Y3Q3 217 aa6.89□□□□□ -1.31
IFT88-203ENST00000389373 GNG7O60262 68 aa6.88□□□□□ -1.31
IFT88-203ENST00000389373 HPRT1P00492 218 aa6.88□□□□□ -1.31
IFT88-203ENST00000389373 SPART-AS1P0CW21 52 aa6.88□□□□□ -1.31
IFT88-203ENST00000389373 RANBP1P43487 201 aa6.88□□□□□ -1.31
IFT88-203ENST00000389373 TAS2R31P59538 309 aa6.88□□□□□ -1.31
IFT88-203ENST00000389373 CDNFQ49AH0 187 aa6.88□□□□□ -1.31
IFT88-203ENST00000389373 Q6ZS49 121 aa6.88□□□□□ -1.31
IFT88-203ENST00000389373 ZNF367Q7RTV3 350 aa6.88□□□□□ -1.31
IFT88-203ENST00000389373 C6orf223Q8N319 242 aa6.88□□□□□ -1.31
IFT88-203ENST00000389373 CSNK1G2-AS1Q8NCQ2 148 aa6.88□□□□□ -1.31
IFT88-203ENST00000389373 ATG101Q9BSB4 218 aa6.88□□□□□ -1.31
IFT88-203ENST00000389373 MND1Q9BWT6 205 aa6.88□□□□□ -1.31
IFT88-203ENST00000389373 RNF167Q9H6Y7 350 aa6.88□□□□□ -1.31
IFT88-203ENST00000389373 XCL2Q9UBD3 114 aa6.88□□□□□ -1.31
IFT88-203ENST00000389373 NSG2Q9Y328 171 aa6.88□□□□□ -1.31
IFT88-203ENST00000389373 V9GY05 133 aa6.88□□□□□ -1.31
IFT88-203ENST00000389373 IGHV3OR16-12A0A075B7B8 117 aa6.87□□□□□ -1.31
IFT88-203ENST00000389373 METTL21EPA6NDL7 271 aa6.87□□□□□ -1.31
IFT88-203ENST00000389373 DTYMKP23919 212 aa6.87□□□□□ -1.31
IFT88-203ENST00000389373 CALRP27797 417 aaKnown RBP6.87□□□□□ -1.31
IFT88-203ENST00000389373 ERVK-16P61578 105 aa6.87□□□□□ -1.31
IFT88-203ENST00000389373 THOC7Q6I9Y2 204 aaKnown RBP6.87□□□□□ -1.31
IFT88-203ENST00000389373 CNIH2Q6PI25 160 aa6.87□□□□□ -1.31
IFT88-203ENST00000389373 ZNF773Q6PK81 442 aa6.87□□□□□ -1.31
IFT88-203ENST00000389373 TOMM20LQ6UXN7 152 aa6.87□□□□□ -1.31
IFT88-203ENST00000389373 TMEM91Q6ZNR0 172 aa6.87□□□□□ -1.31
IFT88-203ENST00000389373 HSD17B13Q7Z5P4 300 aaPredicted RBP6.87□□□□□ -1.31
IFT88-203ENST00000389373 OR51H1Q8NH63 302 aa6.87□□□□□ -1.31
IFT88-203ENST00000389373 LSM10Q969L4 123 aaKnown RBP6.87□□□□□ -1.31
IFT88-203ENST00000389373 PINX1Q96BK5 328 aaKnown RBP6.87□□□□□ -1.31
IFT88-203ENST00000389373 FAM210BQ96KR6 192 aa6.87□□□□□ -1.31
IFT88-203ENST00000389373 YTHDF1Q9BYJ9 559 aaKnown RBP6.87□□□□□ -1.31
IFT88-203ENST00000389373 NXF2Q9GZY0 626 aaKnown RBP6.87□□□□□ -1.31
IFT88-203ENST00000389373 ATG5Q9H1Y0 275 aa6.87□□□□□ -1.31
IFT88-203ENST00000389373 VSIRQ9H7M9 311 aa6.87□□□□□ -1.31
IFT88-203ENST00000389373 LSM2Q9Y333 95 aaKnown RBP6.87□□□□□ -1.31
IFT88-203ENST00000389373 OR51B2Q9Y5P1 312 aa6.87□□□□□ -1.31
IFT88-203ENST00000389373 TRAV2A0A0B4J234 112 aa6.86□□□□□ -1.31
IFT88-203ENST00000389373 K7EQG2 157 aa6.86□□□□□ -1.31
IFT88-203ENST00000389373 ARL6IP5O75915 188 aa6.86□□□□□ -1.31
IFT88-203ENST00000389373 HSMCR30P0CW71 290 aa6.86□□□□□ -1.31
IFT88-203ENST00000389373 RPS25P62851 125 aaKnown RBP6.86□□□□□ -1.31
IFT88-203ENST00000389373 CATR1Q13166 79 aa6.86□□□□□ -1.31
IFT88-203ENST00000389373 SPHARQ15513 63 aa6.86□□□□□ -1.31
IFT88-203ENST00000389373 UFD1Q92890 307 aa6.86□□□□□ -1.31
IFT88-203ENST00000389373 MOB3AQ96BX8 217 aa6.86□□□□□ -1.31
IFT88-203ENST00000389373 RAB40CQ96S21 281 aa6.86□□□□□ -1.31
IFT88-203ENST00000389373 NIPSNAP3BQ9BS92 247 aa6.86□□□□□ -1.31
IFT88-203ENST00000389373 SLC5A7Q9GZV3 580 aa6.86□□□□□ -1.31
IFT88-203ENST00000389373 DCSTAMPQ9H295 470 aa6.86□□□□□ -1.31
IFT88-203ENST00000389373 TMEM231Q9H6L2 316 aa6.86□□□□□ -1.31
IFT88-203ENST00000389373 NDUFA4L2Q9NRX3 87 aa6.86□□□□□ -1.31
IFT88-203ENST00000389373 SCN3BQ9NY72 215 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms