RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 SEC14L6B5MCN3 397 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 OVOL1O14753 267 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 B3GALNT1O75752 331 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 IGKV1-5P01602 117 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 CRYGCP07315 174 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 FGF2P09038 288 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 OR5AC1P0C628 307 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 OR13C7P0DN81 318 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 HIST1H1BP16401 226 aaKnown RBP7.11□□□□□ -1.27
HMGN1-202ENST00000380747 AKR1C4P17516 323 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 CTRB1P17538 263 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 UCP1P25874 307 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 IZUMO4Q1ZYL8 232 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 C9orf66Q5T8R8 295 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 CTRB2Q6GPI1 263 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 THOC7Q6I9Y2 204 aaKnown RBP7.11□□□□□ -1.27
HMGN1-202ENST00000380747 ZNF343Q6P1L6 599 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 SGPP2Q8IWX5 399 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 CADM3Q8N126 398 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 GDPD1Q8N9F7 314 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 NECAP1Q8NC96 275 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 DLX4Q92988 240 aaPredicted RBP7.11□□□□□ -1.27
HMGN1-202ENST00000380747 LSM10Q969L4 123 aaKnown RBP7.11□□□□□ -1.27
HMGN1-202ENST00000380747 RRNAD1Q96FB5 475 aaKnown RBP7.11□□□□□ -1.27
HMGN1-202ENST00000380747 SRSF8Q9BRL6 282 aaKnown RBP7.11□□□□□ -1.27
HMGN1-202ENST00000380747 NDUFA4L2Q9NRX3 87 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 PEF1Q9UBV8 284 aaKnown RBP7.11□□□□□ -1.27
HMGN1-202ENST00000380747 RYR2Q92736 4967 aa7.11□□□□□ -1.27
HMGN1-202ENST00000380747 NDUFB8O95169 186 aa7.1□□□□□ -1.27
HMGN1-202ENST00000380747 TRBV12-3P01733 135 aa7.1□□□□□ -1.27
HMGN1-202ENST00000380747 IGHV3-23P01764 117 aa7.1□□□□□ -1.27
HMGN1-202ENST00000380747 ZP3P21754 424 aa7.1□□□□□ -1.27
HMGN1-202ENST00000380747 RPL11P62913 178 aaKnown RBP7.1□□□□□ -1.27
HMGN1-202ENST00000380747 DHODHQ02127 395 aa7.1□□□□□ -1.27
HMGN1-202ENST00000380747 WT1-ASQ06250 92 aa7.1□□□□□ -1.27
HMGN1-202ENST00000380747 BAK1Q16611 211 aa7.1□□□□□ -1.27
HMGN1-202ENST00000380747 C15orf32Q32M92 178 aa7.1□□□□□ -1.27
HMGN1-202ENST00000380747 HSD17B13Q7Z5P4 300 aaPredicted RBP7.1□□□□□ -1.27
HMGN1-202ENST00000380747 TMED4Q7Z7H5 227 aa7.1□□□□□ -1.27
HMGN1-202ENST00000380747 OR5B3Q8NH48 314 aa7.1□□□□□ -1.27
HMGN1-202ENST00000380747 TMEM230Q96A57 120 aa7.1□□□□□ -1.27
HMGN1-202ENST00000380747 TMEM56Q96MV1 263 aa7.1□□□□□ -1.27
HMGN1-202ENST00000380747 TMEM222Q9H0R3 208 aa7.1□□□□□ -1.27
HMGN1-202ENST00000380747 TMEM14BQ9NUH8 114 aa7.1□□□□□ -1.27
HMGN1-202ENST00000380747 KCNIP3Q9Y2W7 256 aa7.1□□□□□ -1.27
HMGN1-202ENST00000380747 S4R3C0 116 aa7.1□□□□□ -1.27
HMGN1-202ENST00000380747 IGLV11-55A0A075B6I3 123 aa7.09□□□□□ -1.27
HMGN1-202ENST00000380747 A0A0G2JRQ6 117 aa7.09□□□□□ -1.27
HMGN1-202ENST00000380747 CYB5BO43169 146 aa7.09□□□□□ -1.27
HMGN1-202ENST00000380747 SAP30O75446 220 aa7.09□□□□□ -1.27
HMGN1-202ENST00000380747 KRTAP10-11P60412 298 aa7.09□□□□□ -1.27
HMGN1-202ENST00000380747 HSPE1P61604 102 aaKnown RBP7.09□□□□□ -1.27
HMGN1-202ENST00000380747 RPEL1Q2QD12 228 aa7.09□□□□□ -1.27
HMGN1-202ENST00000380747 CNPY1Q3B7I2 92 aa7.09□□□□□ -1.27
HMGN1-202ENST00000380747 SPINK9Q5DT21 86 aa7.09□□□□□ -1.27
HMGN1-202ENST00000380747 TMEM268Q5VZI3 342 aa7.09□□□□□ -1.27
HMGN1-202ENST00000380747 SLC25A24Q6NUK1 477 aa7.09□□□□□ -1.27
HMGN1-202ENST00000380747 SELENOHQ8IZQ5 122 aaKnown RBP7.09□□□□□ -1.27
HMGN1-202ENST00000380747 LHFPL5Q8TAF8 219 aa7.09□□□□□ -1.27
HMGN1-202ENST00000380747 GLYATL2Q8WU03 294 aa7.09□□□□□ -1.27
HMGN1-202ENST00000380747 DEDD2Q8WXF8 326 aa7.09□□□□□ -1.27
HMGN1-202ENST00000380747 EEF1AKMT3Q96AZ1 226 aa7.09□□□□□ -1.27
HMGN1-202ENST00000380747 SDHCQ99643 169 aaPredicted RBP7.09□□□□□ -1.27
HMGN1-202ENST00000380747 PDCD10Q9BUL8 212 aa7.09□□□□□ -1.27
HMGN1-202ENST00000380747 C19orf73Q9NVV2 129 aa7.09□□□□□ -1.27
HMGN1-202ENST00000380747 AURKAIP1Q9NWT8 199 aaPredicted RBP7.09□□□□□ -1.27
HMGN1-202ENST00000380747 DNAH7Q8WXX0 4024 aa7.09□□□□□ -1.28
HMGN1-202ENST00000380747 STAB2Q8WWQ8 2551 aa7.09□□□□□ -1.28
HMGN1-202ENST00000380747 EPPK1P58107 5090 aaKnown RBP7.08□□□□□ -1.28
HMGN1-202ENST00000380747 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.08□□□□□ -1.28
HMGN1-202ENST00000380747 A0A0B4J293 547 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 PPP5D1E7EU14 171 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 CDS2O95674 445 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 IFNA17P01571 189 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 P0C879 139 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 ANXA3P12429 323 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 IL7P13232 177 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 SYNJ2BPP57105 145 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 PRCDQ00LT1 54 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 TMEM187Q14656 261 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 KIR3DS1Q14943 382 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 TATDN3Q17R31 274 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 FAM209BQ5JX69 171 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 CLEC19AQ6UXS0 136 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 SLC35G3Q8N808 338 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 CHAC2Q8WUX2 184 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 RBPMSQ93062 196 aaKnown RBP7.08□□□□□ -1.28
HMGN1-202ENST00000380747 SLC25A21Q9BQT8 299 aaPredicted RBP7.08□□□□□ -1.28
HMGN1-202ENST00000380747 ELOVL1Q9BW60 279 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 PLEKHA3Q9HB20 300 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 THYN1Q9P016 225 aa7.08□□□□□ -1.28
HMGN1-202ENST00000380747 F11RQ9Y624 299 aaKnown RBP7.08□□□□□ -1.28
HMGN1-202ENST00000380747 IGHV3-21A0A0B4J1V1 117 aa7.07□□□□□ -1.28
HMGN1-202ENST00000380747 NAP1L6A6NFF2 107 aa7.07□□□□□ -1.28
HMGN1-202ENST00000380747 MFSD2BA6NFX1 497 aa7.07□□□□□ -1.28
HMGN1-202ENST00000380747 CENPXA8MT69 81 aa7.07□□□□□ -1.28
HMGN1-202ENST00000380747 BMPR1BO00238 502 aa7.07□□□□□ -1.28
HMGN1-202ENST00000380747 ST8SIA3O43173 380 aa7.07□□□□□ -1.28
HMGN1-202ENST00000380747 GGCTO75223 188 aaKnown RBP7.07□□□□□ -1.28
HMGN1-202ENST00000380747 HLA-AP01891 365 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms