RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 CEACAM1P13688 526 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 GLRXP35754 106 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 OR9G4Q8NGQ1 327 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 GDF15Q99988 308 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 DOCK10Q96BY6 2186 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 HIGD1CA8MV81 97 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 PMS2CLQ68D20 193 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 OR52E5Q8NH55 327 aa8.11□□□□□ -1.11
SNX1-202ENST00000380285 ASIPP42127 132 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 ASCL2Q99929 193 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 REPIN1Q9BWE0 567 aaKnown RBP8.1□□□□□ -1.11
SNX1-202ENST00000380285 KIAA2026Q5HYC2 2103 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 SIP14410 1827 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 SPEM2Q0P670 501 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 FOXC1Q12948 553 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 SCGB3A1Q96QR1 104 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 HIST1H2BLQ99880 126 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 DOCK6Q96HP0 2047 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 NUP37Q8NFH4 326 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 SIGMAR1Q99720 223 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 SRXN1Q9BYN0 137 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 PPIAL4CA0A0B4J2A2 164 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 PPIAL4GP0DN37 164 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 TEX45Q8NA69 505 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 SSBP3Q9BWW4 388 aaPredicted RBP8.1□□□□□ -1.11
SNX1-202ENST00000380285 ZSWIM8A7E2V4 1837 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 WDR81Q562E7 1941 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 NPFFO15130 113 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 TGIF1Q15583 401 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 ZNF826PQ6ZT77 177 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 TRAV8-6A0A0B4J262 113 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 CA1P00915 261 aaPredicted RBP8.1□□□□□ -1.11
SNX1-202ENST00000380285 CACNG7P62955 275 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 HSD52Q0P140 79 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 PCOLCEQ15113 449 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 ZNF56Q15929 161 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 HIST3H2BBQ8N257 126 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 SLC25A28Q96A46 364 aa8.1□□□□□ -1.11
SNX1-202ENST00000380285 SSBP4Q9BWG4 385 aaPredicted RBP8.1□□□□□ -1.11
SNX1-202ENST00000380285 B9A039 149 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 CLEC2AQ6UVW9 174 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 AGMATQ9BSE5 352 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 FAM166AQ6J272 317 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 FOXD3Q9UJU5 478 aaPredicted RBP8.09□□□□□ -1.11
SNX1-202ENST00000380285 CASP8AP2Q9UKL3 1982 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 YPEL1O60688 119 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 HBDP02042 147 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 WDR82Q6UXN9 313 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 TMEM101Q96IK0 257 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 YPEL2Q96QA6 119 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 YAE1D1Q9NRH1 226 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 LY96Q9Y6Y9 160 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 IGKV3-7A0A075B6H7 116 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 COLCA2A8K830 154 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 ID3Q02535 119 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 TFF3Q07654 80 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 ZXDCQ2QGD7 858 aaPredicted RBP8.09□□□□□ -1.11
SNX1-202ENST00000380285 TMEM170BQ5T4T1 132 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 FER1L6-AS1Q8NA97 138 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 DNASE2BQ8WZ79 361 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 HILPDAQ9Y5L2 63 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 HS3ST3B1Q9Y662 390 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 A0A1W2PRD5 423 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 A0A1W2PRF3 423 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 A0A1W2PRM7 423 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 PRSS47A8MTI9 375 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 C12orf77C9JDV5 145 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 ADMP35318 185 aa8.09□□□□□ -1.11
SNX1-202ENST00000380285 KBTBD11-OT1A0A1B0GTJ5 212 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 IL9P15248 144 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 GFRA1P56159 465 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 C1orf194Q5T5A4 169 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 WFDC3Q8IUB2 231 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 EAF1Q96JC9 268 aaPredicted RBP8.08□□□□□ -1.12
SNX1-202ENST00000380285 DMRTA2Q96SC8 542 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 C9JCJ5 164 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 DPM2O94777 84 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 IGFBP2P18065 325 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 ERVK11-1P61568 191 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 ORMDL2Q53FV1 153 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 PVRIGQ6DKI7 326 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 LURAP1LQ8IV03 231 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 SIPA1L1O43166 1804 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 C15orf61A6NNL5 157 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 FADS6Q8N9I5 356 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 IGKV3D-11A0A0A0MRZ8 115 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 ORAOV1Q8WV07 137 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 FOXC2Q99958 501 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 F2Z2F3 143 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 FOXA3P55318 350 aaPredicted RBP8.08□□□□□ -1.12
SNX1-202ENST00000380285 ZNF418Q8TF45 676 aaPredicted RBP8.08□□□□□ -1.12
SNX1-202ENST00000380285 LINC00312Q9Y6C7 94 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 MPDZO75970 2070 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 A0A0G2JLM5 398 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 IQCF6A8MYZ5 107 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 PF4V1P10720 104 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 SRSF4Q08170 494 aaKnown RBP8.08□□□□□ -1.12
SNX1-202ENST00000380285 C1QL2Q7Z5L3 287 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 SLC50A1Q9BRV3 221 aa8.08□□□□□ -1.12
SNX1-202ENST00000380285 RNF115Q9Y4L5 304 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms