RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 YTHDF2Q9Y5A9 579 aaKnown RBP15.19■□□□□ 0.02
USP49-202ENST00000373010 TRGC1P0CF51 173 aa15.19■□□□□ 0.02
USP49-202ENST00000373010 GALR1P47211 349 aa15.19■□□□□ 0.02
USP49-202ENST00000373010 DLX1P56177 255 aa15.19■□□□□ 0.02
USP49-202ENST00000373010 GAMTQ14353 236 aa15.19■□□□□ 0.02
USP49-202ENST00000373010 LINC00311Q8N616 119 aa15.19■□□□□ 0.02
USP49-202ENST00000373010 TMEM186Q96B77 213 aa15.19■□□□□ 0.02
USP49-202ENST00000373010 NDUFA4L2Q9NRX3 87 aa15.19■□□□□ 0.02
USP49-202ENST00000373010 SLC45A2Q9UMX9 530 aa15.19■□□□□ 0.02
USP49-202ENST00000373010 PGPEP1LA6NFU8 196 aa15.18■□□□□ 0.02
USP49-202ENST00000373010 FNDC10F2Z333 226 aa15.18■□□□□ 0.02
USP49-202ENST00000373010 S100A9P06702 114 aaKnown RBP15.18■□□□□ 0.02
USP49-202ENST00000373010 SMIM6P0DI80 62 aa15.18■□□□□ 0.02
USP49-202ENST00000373010 GATA2P23769 480 aaPredicted RBP15.18■□□□□ 0.02
USP49-202ENST00000373010 PRB3Q04118 309 aaPredicted RBP15.18■□□□□ 0.02
USP49-202ENST00000373010 TMEM144Q7Z5S9 345 aa15.18■□□□□ 0.02
USP49-202ENST00000373010 ZNF596Q8TC21 504 aa15.18■□□□□ 0.02
USP49-202ENST00000373010 IFITM10A6NMD0 228 aa15.18■□□□□ 0.02
USP49-202ENST00000373010 SIAH2O43255 324 aa15.18■□□□□ 0.02
USP49-202ENST00000373010 VENTXO95231 258 aa15.18■□□□□ 0.02
USP49-202ENST00000373010 IGHV1-8P0DP01 117 aa15.18■□□□□ 0.02
USP49-202ENST00000373010 CASP6P55212 293 aa15.18■□□□□ 0.02
USP49-202ENST00000373010 C10orf55Q5SWW7 151 aa15.18■□□□□ 0.02
USP49-202ENST00000373010 MIR17HGQ75NE6 70 aa15.18■□□□□ 0.02
USP49-202ENST00000373010 C11orf42Q8N5U0 333 aa15.18■□□□□ 0.02
USP49-202ENST00000373010 ZNF114Q8NC26 417 aa15.18■□□□□ 0.02
USP49-202ENST00000373010 OR4P4Q8NGL7 312 aa15.18■□□□□ 0.02
USP49-202ENST00000373010 OR4C13Q8NGP0 309 aa15.18■□□□□ 0.02
USP49-202ENST00000373010 SCO2A0A1W2PP80 73 aa15.17■□□□□ 0.02
USP49-202ENST00000373010 F6UZH7 168 aa15.17■□□□□ 0.02
USP49-202ENST00000373010 CHRNA7P36544 502 aa15.17■□□□□ 0.02
USP49-202ENST00000373010 CA7P43166 264 aa15.17■□□□□ 0.02
USP49-202ENST00000373010 LINC01551Q86U37 167 aa15.17■□□□□ 0.02
USP49-202ENST00000373010 PDPNQ86YL7 162 aa15.17■□□□□ 0.02
USP49-202ENST00000373010 C8orf31Q8N9H6 132 aa15.17■□□□□ 0.02
USP49-202ENST00000373010 OR1L8Q8NGR8 309 aa15.17■□□□□ 0.02
USP49-202ENST00000373010 OR9G1Q8NH87 305 aa15.17■□□□□ 0.02
USP49-202ENST00000373010 RITA1Q96K30 269 aa15.17■□□□□ 0.02
USP49-202ENST00000373010 OR5B12Q96R08 314 aa15.17■□□□□ 0.02
USP49-202ENST00000373010 CCL21O00585 134 aa15.17■□□□□ 0.02
USP49-202ENST00000373010 PHOX2AO14813 284 aa15.17■□□□□ 0.02
USP49-202ENST00000373010 IGLV2-23P01705 113 aa15.17■□□□□ 0.02
USP49-202ENST00000373010 OR10J1P30954 320 aa15.17■□□□□ 0.02
USP49-202ENST00000373010 FAM78BQ5VT40 261 aa15.17■□□□□ 0.02
USP49-202ENST00000373010 USF1P22415 310 aaPredicted RBP15.16■□□□□ 0.02
USP49-202ENST00000373010 GFI1BQ5VTD9 330 aa15.16■□□□□ 0.02
USP49-202ENST00000373010 TGIF2LXQ8IUE1 241 aa15.16■□□□□ 0.02
USP49-202ENST00000373010 TMEM167AQ8TBQ9 72 aa15.16■□□□□ 0.02
USP49-202ENST00000373010 PYGO2Q9BRQ0 406 aa15.16■□□□□ 0.02
USP49-202ENST00000373010 WASHC3Q9Y3C0 194 aa15.16■□□□□ 0.02
USP49-202ENST00000373010 IGHV3-72A0A0B4J1Y9 119 aa15.16■□□□□ 0.02
USP49-202ENST00000373010 CGB1A6NKQ9 187 aa15.16■□□□□ 0.02
USP49-202ENST00000373010 S100PP25815 95 aa15.16■□□□□ 0.02
USP49-202ENST00000373010 CDX1P47902 265 aaPredicted RBP15.16■□□□□ 0.02
USP49-202ENST00000373010 CDSNQ15517 529 aa15.16■□□□□ 0.02
USP49-202ENST00000373010 FAM71F2Q6NXP2 309 aa15.16■□□□□ 0.02
USP49-202ENST00000373010 ANAPC16Q96DE5 110 aa15.16■□□□□ 0.02
USP49-202ENST00000373010 TCEAL7Q9BRU2 100 aa15.16■□□□□ 0.02
USP49-202ENST00000373010 TPSG1Q9NRR2 321 aa15.16■□□□□ 0.02
USP49-202ENST00000373010 TRBV20OR9-2A0A075B6H5 130 aa15.15■□□□□ 0.02
USP49-202ENST00000373010 A0A087X0M5 115 aa15.15■□□□□ 0.02
USP49-202ENST00000373010 A0A1B0GX30 115 aa15.15■□□□□ 0.02
USP49-202ENST00000373010 CD69Q07108 199 aa15.15■□□□□ 0.02
USP49-202ENST00000373010 MUC15Q8N387 334 aa15.15■□□□□ 0.02
USP49-202ENST00000373010 PCGF1Q9BSM1 259 aa15.15■□□□□ 0.02
USP49-202ENST00000373010 ZNF430Q9H8G1 570 aaPredicted RBP15.15■□□□□ 0.02
USP49-202ENST00000373010 PLXNB1O43157 2135 aa15.15■□□□□ 0.02
USP49-202ENST00000373010 NAV3Q8IVL0 2385 aa15.15■□□□□ 0.02
USP49-202ENST00000373010 A0A1W2PPQ1 181 aa15.15■□□□□ 0.02
USP49-202ENST00000373010 C1QTNF9P0C862 333 aa15.15■□□□□ 0.02
USP49-202ENST00000373010 ERHP84090 104 aaKnown RBP15.15■□□□□ 0.02
USP49-202ENST00000373010 WT1-ASQ06250 92 aa15.15■□□□□ 0.02
USP49-202ENST00000373010 OR2T6Q8NHC8 308 aa15.15■□□□□ 0.02
USP49-202ENST00000373010 TMEM133Q9H2Q1 129 aa15.15■□□□□ 0.02
USP49-202ENST00000373010 TGOLN2O43493 480 aa15.14■□□□□ 0.01
USP49-202ENST00000373010 SLC25A17O43808 307 aa15.14■□□□□ 0.01
USP49-202ENST00000373010 ZNF137PP52743 207 aa15.14■□□□□ 0.01
USP49-202ENST00000373010 ATP5IP56385 69 aaPredicted RBP15.14■□□□□ 0.01
USP49-202ENST00000373010 SRD5A3Q9H8P0 318 aa15.14■□□□□ 0.01
USP49-202ENST00000373010 LRBAP50851 2863 aa15.14■□□□□ 0.01
USP49-202ENST00000373010 RELNP78509 3460 aa15.14■□□□□ 0.01
USP49-202ENST00000373010 ANKHD1Q8IWZ3 2542 aaKnown RBP15.14■□□□□ 0.01
USP49-202ENST00000373010 TPRP12270 2363 aaKnown RBP15.14■□□□□ 0.01
USP49-202ENST00000373010 DLL1O00548 723 aa15.14■□□□□ 0.01
USP49-202ENST00000373010 ENSAO43768 121 aaKnown RBP15.14■□□□□ 0.01
USP49-202ENST00000373010 OR4X1Q8NH49 305 aa15.14■□□□□ 0.01
USP49-202ENST00000373010 VSTM2AQ8TAG5 236 aa15.14■□□□□ 0.01
USP49-202ENST00000373010 TXNDC17Q9BRA2 123 aa15.14■□□□□ 0.01
USP49-202ENST00000373010 RALYQ9UKM9 306 aaKnown RBP15.14■□□□□ 0.01
USP49-202ENST00000373010 FUT9Q9Y231 359 aa15.14■□□□□ 0.01
USP49-202ENST00000373010 MALRD1Q5VYJ5 2156 aa15.14■□□□□ 0.01
USP49-202ENST00000373010 NBASA2RRP1 2371 aa15.13■□□□□ 0.01
USP49-202ENST00000373010 SOD3P08294 240 aa15.13■□□□□ 0.01
USP49-202ENST00000373010 HNF1AP20823 631 aa15.13■□□□□ 0.01
USP49-202ENST00000373010 PDZD11Q5EBL8 140 aa15.13■□□□□ 0.01
USP49-202ENST00000373010 OR4A5Q8NH83 315 aa15.13■□□□□ 0.01
USP49-202ENST00000373010 ACY3Q96HD9 319 aa15.13■□□□□ 0.01
USP49-202ENST00000373010 NIT2Q9NQR4 276 aa15.13■□□□□ 0.01
USP49-202ENST00000373010 ABCA4P78363 2273 aa15.13■□□□□ 0.01
USP49-202ENST00000373010 ATRXP46100 2492 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms