RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 TNFRSF18Q9Y5U5 241 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 IL11P20809 199 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 HIST1H2BKO60814 126 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 HIST1H2BJP06899 126 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 SAA1P0DJI8 122 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 HIST1H2BOP23527 126 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 HIST1H2BBP33778 126 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 HIST1H2BDP58876 126 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 HIST1H2BCP62807 126 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 HIST2H2BEQ16778 126 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 BCL6BQ8N143 479 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 HIST1H2BHQ93079 126 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 HIST1H2BNQ99877 126 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 HIST1H2BMQ99879 126 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 ZP4Q12836 540 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 HIST3H2BBQ8N257 126 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 OR11H4Q8NGC9 324 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 TMEM238C9JI98 176 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 WISP3O95389 354 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 SRP19P09132 144 aaKnown RBP11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 GCHFRP30047 84 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 UNQ6494/PRO21346Q6UXR6 183 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 CHCHD1Q96BP2 118 aaKnown RBP11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 TMEM222Q9H0R3 208 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 RNF122Q9H9V4 155 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 LAMTOR3Q9UHA4 124 aa11.94□□□□□ -0.5
RAPGEF1-202ENST00000372190 EVI2AP22794 236 aa11.93□□□□□ -0.5
RAPGEF1-202ENST00000372190 SIGLEC12Q96PQ1 595 aa11.93□□□□□ -0.5
RAPGEF1-202ENST00000372190 SMPXQ9UHP9 88 aa11.93□□□□□ -0.5
RAPGEF1-202ENST00000372190 SCN3AQ9NY46 2000 aa11.93□□□□□ -0.5
RAPGEF1-202ENST00000372190 J3QT63 122 aa11.93□□□□□ -0.5
RAPGEF1-202ENST00000372190 SHISA5Q8N114 240 aa11.93□□□□□ -0.5
RAPGEF1-202ENST00000372190 PEX7O00628 323 aa11.93□□□□□ -0.5
RAPGEF1-202ENST00000372190 GPX1P07203 203 aa11.93□□□□□ -0.5
RAPGEF1-202ENST00000372190 SDF2L1Q9HCN8 221 aa11.93□□□□□ -0.5
RAPGEF1-202ENST00000372190 RBMY1FQ15415 496 aaKnown RBP11.93□□□□□ -0.5
RAPGEF1-202ENST00000372190 OR51G1Q8NGK1 321 aa11.93□□□□□ -0.5
RAPGEF1-202ENST00000372190 FBLIM1Q8WUP2 373 aa11.93□□□□□ -0.5
RAPGEF1-202ENST00000372190 CENPVL1A0A0U1RR11 272 aa11.92□□□□□ -0.5
RAPGEF1-202ENST00000372190 RPL32P62910 135 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-202ENST00000372190 PSG3Q16557 428 aa11.92□□□□□ -0.5
RAPGEF1-202ENST00000372190 IGHV3-21A0A0B4J1V1 117 aa11.92□□□□□ -0.5
RAPGEF1-202ENST00000372190 SMIM10L1P0DMW3 83 aa11.92□□□□□ -0.5
RAPGEF1-202ENST00000372190 COQ2Q96H96 371 aa11.92□□□□□ -0.5
RAPGEF1-202ENST00000372190 SMIM10Q96HG1 83 aa11.92□□□□□ -0.5
RAPGEF1-202ENST00000372190 FBXL15Q9H469 300 aa11.92□□□□□ -0.5
RAPGEF1-202ENST00000372190 OR9G9P0C7N8 305 aa11.92□□□□□ -0.5
RAPGEF1-202ENST00000372190 LINC01559Q495D7 138 aa11.92□□□□□ -0.5
RAPGEF1-202ENST00000372190 ATRAIDQ6UW56 229 aa11.92□□□□□ -0.5
RAPGEF1-202ENST00000372190 PRDM14Q9GZV8 571 aa11.92□□□□□ -0.5
RAPGEF1-202ENST00000372190 RALGAPA2Q2PPJ7 1873 aa11.92□□□□□ -0.5
RAPGEF1-202ENST00000372190 RPP21Q9H633 154 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-202ENST00000372190 CHTOPQ9Y3Y2 248 aaKnown RBP11.92□□□□□ -0.5
RAPGEF1-202ENST00000372190 CGB1A6NKQ9 187 aa11.92□□□□□ -0.5
RAPGEF1-202ENST00000372190 KIR3DS1Q14943 382 aa11.92□□□□□ -0.5
RAPGEF1-202ENST00000372190 FAM57AQ8TBR7 257 aa11.92□□□□□ -0.5
RAPGEF1-202ENST00000372190 B5MCH6 92 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 ASIPP42127 132 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 PIGYQ3MUY2 71 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 GATD1Q8NB37 220 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 C4orf51C9J302 202 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 TMEM86BQ8N661 226 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 CNTRLQ7Z7A1 2325 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 A0A0U1RQV5 110 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 C9orf172C9J069 976 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 NPIPB4C9JG80 1138 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 MGST3O14880 152 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 NANOS3P60323 173 aaKnown RBP11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 KLHDC2Q9Y2U9 406 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 J3KT08 172 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 IFNL4K9M1U5 179 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 FER1L6-AS1Q8NA97 138 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 RAX2Q96IS3 184 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 MBNL3Q9NUK0 354 aaKnown RBP11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 SF3B6Q9Y3B4 125 aaKnown RBP11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 H3BTX0 84 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 PSG4Q00888 419 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 FAM27BQ5VT28 67 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 CCDC144NLQ6NUI1 221 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 THSD7BQ9C0I4 1608 aa11.91□□□□□ -0.5
RAPGEF1-202ENST00000372190 H3BMM0 161 aa11.9□□□□□ -0.5
RAPGEF1-202ENST00000372190 TMEM144Q7Z5S9 345 aa11.9□□□□□ -0.5
RAPGEF1-202ENST00000372190 ZPLD1Q8TCW7 415 aa11.9□□□□□ -0.5
RAPGEF1-202ENST00000372190 UBE2WQ96B02 151 aa11.9□□□□□ -0.5
RAPGEF1-202ENST00000372190 GZMBP10144 247 aa11.9□□□□□ -0.5
RAPGEF1-202ENST00000372190 DUTP33316 252 aaKnown RBP11.9□□□□□ -0.5
RAPGEF1-202ENST00000372190 RHOGP84095 191 aa11.9□□□□□ -0.5
RAPGEF1-202ENST00000372190 SRXN1Q9BYN0 137 aa11.9□□□□□ -0.5
RAPGEF1-202ENST00000372190 TDRD6O60522 2096 aaKnown RBP11.9□□□□□ -0.5
RAPGEF1-202ENST00000372190 FAM159AQ6UWV7 190 aa11.9□□□□□ -0.5
RAPGEF1-202ENST00000372190 RFLNBQ8N5W9 214 aa11.9□□□□□ -0.5
RAPGEF1-202ENST00000372190 PPDPFLQ8WWR9 84 aa11.9□□□□□ -0.5
RAPGEF1-202ENST00000372190 PRSS47A8MTI9 375 aa11.9□□□□□ -0.5
RAPGEF1-202ENST00000372190 PATJQ8NI35 1801 aa11.9□□□□□ -0.5
RAPGEF1-202ENST00000372190 TRAV24A0A0B4J272 114 aa11.9□□□□□ -0.51
RAPGEF1-202ENST00000372190 TCTEX1D4Q5JR98 221 aa11.9□□□□□ -0.51
RAPGEF1-202ENST00000372190 NPCDR1Q9BY65 106 aa11.9□□□□□ -0.51
RAPGEF1-202ENST00000372190 AMBPP02760 352 aa11.89□□□□□ -0.51
RAPGEF1-202ENST00000372190 TDGF1P13385 188 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms