RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 TMEM222Q9H0R3 208 aa11.68□□□□□ -0.54
SMPDL3A-201ENST00000368440 BOLA1Q9Y3E2 137 aa11.68□□□□□ -0.54
SMPDL3A-201ENST00000368440 A0A0G2JRQ6 117 aa11.68□□□□□ -0.54
SMPDL3A-201ENST00000368440 CCL24O00175 119 aa11.68□□□□□ -0.54
SMPDL3A-201ENST00000368440 RAP2BP61225 183 aa11.68□□□□□ -0.54
SMPDL3A-201ENST00000368440 GSG1LQ6UXU4 331 aa11.68□□□□□ -0.54
SMPDL3A-201ENST00000368440 H2BFWTQ7Z2G1 175 aa11.68□□□□□ -0.54
SMPDL3A-201ENST00000368440 OR10W1Q8NGF6 305 aa11.68□□□□□ -0.54
SMPDL3A-201ENST00000368440 IGLC7A0M8Q6 106 aa11.67□□□□□ -0.54
SMPDL3A-201ENST00000368440 C15orf61A6NNL5 157 aa11.67□□□□□ -0.54
SMPDL3A-201ENST00000368440 SNAPC5O75971 98 aa11.67□□□□□ -0.54
SMPDL3A-201ENST00000368440 FGF2P09038 288 aa11.67□□□□□ -0.54
SMPDL3A-201ENST00000368440 P0C879 139 aa11.67□□□□□ -0.54
SMPDL3A-201ENST00000368440 MYCNOSP40205 109 aa11.67□□□□□ -0.54
SMPDL3A-201ENST00000368440 RUNX1Q01196 453 aa11.67□□□□□ -0.54
SMPDL3A-201ENST00000368440 OR11H1Q8NG94 326 aa11.67□□□□□ -0.54
SMPDL3A-201ENST00000368440 OR51B2Q9Y5P1 312 aa11.67□□□□□ -0.54
SMPDL3A-201ENST00000368440 NPIPB5A8MRT5 1133 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 G3V3Q6 166 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 BRI3O95415 125 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 CDS2O95674 445 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 LGALS1P09382 135 aaKnown RBP11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 CD33P20138 364 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 AKR1C2P52895 323 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 TMEM268Q5VZI3 342 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 LYZL2Q7Z4W2 148 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 GALNT14Q96FL9 552 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 QTRT1Q9BXR0 403 aaKnown RBP11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 TMEM14BQ9NUH8 114 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 GSKIPQ9P0R6 139 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 A0A0B4J2A0 478 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 G3V4G9 280 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 B3GALNT1O75752 331 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 CTRB1P17538 263 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 PSMB6P28072 239 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 FHL3Q13643 280 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 CTRB2Q6GPI1 263 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 C1QL4Q86Z23 238 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 WFDC9Q8NEX5 89 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 OR1L8Q8NGR8 309 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 OR10C1Q96KK4 312 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 HINT2Q9BX68 163 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 NDUFA4L2Q9NRX3 87 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 SHPKQ9UHJ6 478 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 PRNDQ9UKY0 176 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 ZNF257Q9Y2Q1 563 aa11.66□□□□□ -0.54
SMPDL3A-201ENST00000368440 IGHV4OR15-8A0A075B7B6 117 aa11.65□□□□□ -0.54
SMPDL3A-201ENST00000368440 A0A087WW49 117 aa11.65□□□□□ -0.54
SMPDL3A-201ENST00000368440 FXYD6-FXYD2A0A087WZ82 144 aa11.65□□□□□ -0.54
SMPDL3A-201ENST00000368440 TRBV9A0A0B4J1U6 114 aa11.65□□□□□ -0.54
SMPDL3A-201ENST00000368440 CRYGCP07315 174 aa11.65□□□□□ -0.54
SMPDL3A-201ENST00000368440 IGLL1P15814 213 aa11.65□□□□□ -0.54
SMPDL3A-201ENST00000368440 RHOGP84095 191 aa11.65□□□□□ -0.54
SMPDL3A-201ENST00000368440 WT1-ASQ06250 92 aa11.65□□□□□ -0.54
SMPDL3A-201ENST00000368440 GGNBP1Q5YKI7 109 aa11.65□□□□□ -0.54
SMPDL3A-201ENST00000368440 SELENOHQ8IZQ5 122 aaKnown RBP11.65□□□□□ -0.54
SMPDL3A-201ENST00000368440 LGI3Q8N145 548 aa11.65□□□□□ -0.54
SMPDL3A-201ENST00000368440 OR4A16Q8NH70 328 aa11.65□□□□□ -0.54
SMPDL3A-201ENST00000368440 HYLS1Q96M11 299 aa11.65□□□□□ -0.54
SMPDL3A-201ENST00000368440 MEGF8Q7Z7M0 2845 aa11.64□□□□□ -0.55
SMPDL3A-201ENST00000368440 OR2J3O76001 311 aa11.64□□□□□ -0.55
SMPDL3A-201ENST00000368440 IFNA21P01568 189 aa11.64□□□□□ -0.55
SMPDL3A-201ENST00000368440 OXLD1Q5BKU9 147 aa11.64□□□□□ -0.55
SMPDL3A-201ENST00000368440 SLC35G3Q8N808 338 aa11.64□□□□□ -0.55
SMPDL3A-201ENST00000368440 OR1N2Q8NGR9 330 aa11.64□□□□□ -0.55
SMPDL3A-201ENST00000368440 PPP1R1CQ8WVI7 109 aa11.64□□□□□ -0.55
SMPDL3A-201ENST00000368440 RBPMSQ93062 196 aaKnown RBP11.64□□□□□ -0.55
SMPDL3A-201ENST00000368440 FANCD2OSQ96PS1 177 aa11.64□□□□□ -0.55
SMPDL3A-201ENST00000368440 ZNF616Q08AN1 781 aa11.63□□□□□ -0.55
SMPDL3A-201ENST00000368440 IAH1Q2TAA2 248 aaPredicted RBP11.63□□□□□ -0.55
SMPDL3A-201ENST00000368440 SAMD5Q5TGI4 173 aa11.63□□□□□ -0.55
SMPDL3A-201ENST00000368440 Q6ZRM9 215 aa11.63□□□□□ -0.55
SMPDL3A-201ENST00000368440 TMEM56Q96MV1 263 aa11.63□□□□□ -0.55
SMPDL3A-201ENST00000368440 HSPB11Q9Y547 144 aa11.63□□□□□ -0.55
SMPDL3A-201ENST00000368440 DMRT1Q9Y5R6 373 aa11.63□□□□□ -0.55
SMPDL3A-201ENST00000368440 TMEM56-RWDD3S4R434 201 aa11.63□□□□□ -0.55
SMPDL3A-201ENST00000368440 SCGB1D2O95969 90 aa11.63□□□□□ -0.55
SMPDL3A-201ENST00000368440 OR13C7P0DN81 318 aa11.63□□□□□ -0.55
SMPDL3A-201ENST00000368440 SLURP1P55000 103 aa11.63□□□□□ -0.55
SMPDL3A-201ENST00000368440 SPINK9Q5DT21 86 aa11.63□□□□□ -0.55
SMPDL3A-201ENST00000368440 OR5B3Q8NH48 314 aa11.63□□□□□ -0.55
SMPDL3A-201ENST00000368440 RNASE11Q8TAA1 199 aaKnown RBP11.63□□□□□ -0.55
SMPDL3A-201ENST00000368440 SRSF8Q9BRL6 282 aaKnown RBP11.63□□□□□ -0.55
SMPDL3A-201ENST00000368440 FKBP11Q9NYL4 201 aa11.63□□□□□ -0.55
SMPDL3A-201ENST00000368440 TRAV14DV4A0A0A6YYC5 116 aa11.62□□□□□ -0.55
SMPDL3A-201ENST00000368440 A0A0G2JLM5 398 aa11.62□□□□□ -0.55
SMPDL3A-201ENST00000368440 ANKRD34BA5PLL1 514 aa11.62□□□□□ -0.55
SMPDL3A-201ENST00000368440 FAM223BA6NKX1 122 aa11.62□□□□□ -0.55
SMPDL3A-201ENST00000368440 ATG12O94817 140 aa11.62□□□□□ -0.55
SMPDL3A-201ENST00000368440 NDUFB8O95169 186 aa11.62□□□□□ -0.55
SMPDL3A-201ENST00000368440 TRBV12-3P01733 135 aa11.62□□□□□ -0.55
SMPDL3A-201ENST00000368440 S100A10P60903 97 aa11.62□□□□□ -0.55
SMPDL3A-201ENST00000368440 THOC7Q6I9Y2 204 aaKnown RBP11.62□□□□□ -0.55
SMPDL3A-201ENST00000368440 FAM223AQ8IWN6 122 aa11.62□□□□□ -0.55
SMPDL3A-201ENST00000368440 LSM10Q969L4 123 aaKnown RBP11.62□□□□□ -0.55
SMPDL3A-201ENST00000368440 RRNAD1Q96FB5 475 aaKnown RBP11.62□□□□□ -0.55
SMPDL3A-201ENST00000368440 C2orf50Q96LR7 162 aa11.62□□□□□ -0.55
SMPDL3A-201ENST00000368440 S4R3C0 116 aa11.62□□□□□ -0.55
SMPDL3A-201ENST00000368440 IGLV11-55A0A075B6I3 123 aa11.61□□□□□ -0.55
SMPDL3A-201ENST00000368440 LINC01619G3V211 115 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms