RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 Q96M66 194 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 IGHV3-72A0A0B4J1Y9 119 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 DXOO77932 396 aaKnown RBP7.92□□□□□ -1.14
VPS13A-203ENST00000360280 TOMM40O96008 361 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 MYEOVQ96EZ4 313 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 JPT2Q9H910 190 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 TRAV2A0A0B4J234 112 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 PSG4Q00888 419 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 C1orf210Q8IVY1 113 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 ABHD12Q8N2K0 398 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 ERG28Q9UKR5 140 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 KLHDC2Q9Y2U9 406 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 PPIAL4CA0A0B4J2A2 164 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 SCO2A0A1W2PP80 73 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 PPIAL4GP0DN37 164 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 HELZP42694 1942 aaKnown RBP7.92□□□□□ -1.14
VPS13A-203ENST00000360280 SIPA1L1O43166 1804 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 F2Z2F3 143 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 ESDP10768 282 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 MRPL52Q86TS9 123 aaKnown RBP7.92□□□□□ -1.14
VPS13A-203ENST00000360280 POLEQ07864 2286 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 PEX11BO96011 259 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 C1orf100Q5SVJ3 147 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 DEFB124Q8NES8 71 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 PLPPR1Q8TBJ4 325 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 ZNF48Q96MX3 618 aaPredicted RBP7.92□□□□□ -1.14
VPS13A-203ENST00000360280 CITED1Q99966 193 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 ALPK2Q86TB3 2170 aa7.92□□□□□ -1.14
VPS13A-203ENST00000360280 UBE2CO00762 179 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 IGKV3-20P01619 116 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 SPEM2Q0P670 501 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 TMEM187Q14656 261 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 TMEM170AQ8WVE7 144 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 MYOD1P15172 320 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 ADAMTSL3P82987 1691 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 C1QL3Q5VWW1 255 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 CENPVQ7Z7K6 275 aaPredicted RBP7.91□□□□□ -1.14
VPS13A-203ENST00000360280 ITLN2Q8WWU7 325 aaPredicted RBP7.91□□□□□ -1.14
VPS13A-203ENST00000360280 RNASE4P34096 147 aaKnown RBP7.91□□□□□ -1.14
VPS13A-203ENST00000360280 RFLNBQ8N5W9 214 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.91□□□□□ -1.14
VPS13A-203ENST00000360280 OSR1Q8TAX0 266 aaPredicted RBP7.91□□□□□ -1.14
VPS13A-203ENST00000360280 DPH3P1Q9H4G8 78 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 TRBV5-3A0A0A0MS03 114 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 OCIAD2Q56VL3 154 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 DTX1Q86Y01 620 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 MAFAQ8NHW3 353 aaPredicted RBP7.91□□□□□ -1.14
VPS13A-203ENST00000360280 CHODLQ9H9P2 273 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 A8MXK9 166 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 C8orf82Q6P1X6 216 aaPredicted RBP7.91□□□□□ -1.14
VPS13A-203ENST00000360280 UNQ9370/PRO34162Q6UXP9 181 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 OR52E5Q8NH55 327 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 PEMTQ9UBM1 199 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 WNK2Q9Y3S1 2297 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 CCL19Q99731 98 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 TGIF1Q15583 401 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 F8WEM9 126 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 CXCL10P02778 98 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 RPL32P62910 135 aaKnown RBP7.91□□□□□ -1.14
VPS13A-203ENST00000360280 SPANXCQ9NY87 97 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 IGHV5-10-1A0A0J9YXX1 117 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 TM4SF5O14894 197 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 IL11P20809 199 aa7.91□□□□□ -1.14
VPS13A-203ENST00000360280 Q6ZS52 159 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 ZNF784Q8NCA9 323 aaPredicted RBP7.9□□□□□ -1.14
VPS13A-203ENST00000360280 SCN10AQ9Y5Y9 1956 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 IGKV1D-42A0A075B6H8 117 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 SSC4DQ8WTU2 575 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 NPIPB3Q92617 1050 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 KCNK17Q96T54 332 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 Q9H3A6 140 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 LAMTOR3Q9UHA4 124 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 LTBP4Q8N2S1 1624 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 ZNF721Q8TF20 911 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 IL6RP08887 468 aaPredicted RBP7.9□□□□□ -1.14
VPS13A-203ENST00000360280 LOC105371242A0A075B767 164 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 PRR32B1ATL7 298 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 CD28P10747 220 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 COX6B1P14854 86 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 TSPAN7P41732 249 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 MED12Q93074 2177 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 A0A0G2JMZ2 1700 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 LRRC37A2A6NM11 1700 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 LRRC37AA6NMS7 1700 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 H3BTX0 84 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 FAM60AQ9NP50 221 aa7.9□□□□□ -1.14
VPS13A-203ENST00000360280 LAGE3Q14657 143 aa7.9□□□□□ -1.15
VPS13A-203ENST00000360280 GATD1Q8NB37 220 aa7.9□□□□□ -1.15
VPS13A-203ENST00000360280 CADP27708 2225 aa7.9□□□□□ -1.15
VPS13A-203ENST00000360280 J3QW42 95 aa7.9□□□□□ -1.15
VPS13A-203ENST00000360280 HIST1H2BKO60814 126 aa7.9□□□□□ -1.15
VPS13A-203ENST00000360280 HIST1H2BJP06899 126 aa7.9□□□□□ -1.15
VPS13A-203ENST00000360280 HIST1H2BOP23527 126 aa7.9□□□□□ -1.15
VPS13A-203ENST00000360280 HIST1H2BBP33778 126 aa7.9□□□□□ -1.15
VPS13A-203ENST00000360280 LIMS1P48059 325 aa7.9□□□□□ -1.15
VPS13A-203ENST00000360280 HIST1H2BDP58876 126 aa7.9□□□□□ -1.15
VPS13A-203ENST00000360280 HIST1H2BCP62807 126 aa7.9□□□□□ -1.15
VPS13A-203ENST00000360280 HIST2H2BEQ16778 126 aa7.9□□□□□ -1.15
VPS13A-203ENST00000360280 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.9□□□□□ -1.15
VPS13A-203ENST00000360280 HIST1H2BHQ93079 126 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms