RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 MS4A10Q96PG2 267 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 HEYLQ9NQ87 328 aaPredicted RBP3.14□□□□□ -1.91
LIG4-201ENST00000356922 COA4Q9NYJ1 87 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 MRPL36Q9P0J6 103 aaKnown RBP3.14□□□□□ -1.91
LIG4-201ENST00000356922 OR51B2Q9Y5P1 312 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 IGHV3-21A0A0B4J1V1 117 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 A0A1W2PRX2 142 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 GOSR2O14653 212 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 MBPP02686 304 aaPredicted RBP3.14□□□□□ -1.91
LIG4-201ENST00000356922 IGF1P05019 195 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 SSTP61278 116 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 AARDQ4LEZ3 155 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 UNQ5815/PRO19632Q6UWF5 114 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 STPG2Q8N412 459 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 OR4D5Q8NGN0 318 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 OR4F5Q8NH21 305 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 PINX1Q96BK5 328 aaKnown RBP3.14□□□□□ -1.91
LIG4-201ENST00000356922 FANCD2OSQ96PS1 177 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 C19orf24Q9BVV8 132 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 GON7Q9BXV9 100 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 MED28Q9H204 178 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 SLA2Q9H6Q3 261 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 FAM212BQ9NTI7 297 aaPredicted RBP3.14□□□□□ -1.91
LIG4-201ENST00000356922 DNAH3Q8TD57 4116 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 IFNA10P01566 189 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 RLN2P04090 185 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 HKR1P10072 659 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 CD28P10747 220 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 AKR1D1P51857 326 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 ID3Q02535 119 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 IAH1Q2TAA2 248 aaPredicted RBP3.14□□□□□ -1.91
LIG4-201ENST00000356922 SLC25A24Q6NUK1 477 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 UBAC2Q8NBM4 344 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 SGMS2Q8NHU3 365 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 TMEM158Q8WZ71 300 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 LSM10Q969L4 123 aaKnown RBP3.14□□□□□ -1.91
LIG4-201ENST00000356922 BSCL2Q96G97 398 aaPredicted RBP3.14□□□□□ -1.91
LIG4-201ENST00000356922 ZNF414Q96IQ9 312 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 SPIN2AQ99865 258 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 SPIN2BQ9BPZ2 258 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 RNF126Q9BV68 326 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 HIPK2Q9H2X6 1198 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 COL7A1Q02388 2944 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 SNRPGP15A8MWD9 76 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 H3BP45 60 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 IFNA4P05014 189 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 RPLP1P05386 114 aaKnown RBP3.14□□□□□ -1.91
LIG4-201ENST00000356922 SULT1A3P0DMM9 295 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 SULT1A4P0DMN0 295 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 OR13C7P0DN81 318 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 BTF3P20290 206 aaKnown RBP3.14□□□□□ -1.91
LIG4-201ENST00000356922 NUP62P37198 522 aaPredicted RBP3.14□□□□□ -1.91
LIG4-201ENST00000356922 HTR2BP41595 481 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 HSPE1P61604 102 aaKnown RBP3.14□□□□□ -1.91
LIG4-201ENST00000356922 ERHP84090 104 aaKnown RBP3.14□□□□□ -1.91
LIG4-201ENST00000356922 RAB32Q13637 225 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 GSG1LQ6UXU4 331 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 TCTEX1D1Q8N7M0 179 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 OR8H1Q8NGG4 311 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 ARPC1AQ92747 370 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 IL22RA2Q969J5 263 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 DUX3Q96PT4 197 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 RBKSQ9H477 322 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 C11orf1Q9H5F2 150 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 OR5AC2Q9NZP5 309 aa3.14□□□□□ -1.91
LIG4-201ENST00000356922 FOXA2Q9Y261 457 aaPredicted RBP3.14□□□□□ -1.91
LIG4-201ENST00000356922 RCL1Q9Y2P8 373 aaKnown RBP3.14□□□□□ -1.91
LIG4-201ENST00000356922 A0A1W2PN81 502 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 ADARB2-AS1A8MUL3 147 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 FBXO24O75426 580 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 SPDEFO95238 335 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 TRBV12-3P01733 135 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 IGHV3-23P01764 117 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 IAPPP10997 89 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 PVALBP20472 110 aaPredicted RBP3.13□□□□□ -1.91
LIG4-201ENST00000356922 CHRNA7P36544 502 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 TNFRSF9Q07011 255 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 ARL16Q0P5N6 197 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 AWAT1Q58HT5 328 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 ZNF429Q86V71 674 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 MMD2Q8IY49 270 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 KLHDC1Q8N7A1 406 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 OR4X2Q8NGF9 303 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 OR5M8Q8NGP6 311 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 OR5B12Q96R08 314 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 P2RX4Q99571 388 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 C16orf95Q9H693 158 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 FNDC4Q9H6D8 234 aaPredicted RBP3.13□□□□□ -1.91
LIG4-201ENST00000356922 GNB4Q9HAV0 340 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 PLEKHA3Q9HB20 300 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 FKBP11Q9NYL4 201 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 MBD2Q9UBB5 411 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 HSPB7Q9UBY9 170 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 PFDN2Q9UHV9 154 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 TMED3Q9Y3Q3 217 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 LSM5Q9Y4Y9 91 aaKnown RBP3.13□□□□□ -1.91
LIG4-201ENST00000356922 RNF114Q9Y508 228 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 TRAV14DV4A0A0A6YYC5 116 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 TRAV41A0A0B4J266 112 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 SMCO3A2RU48 225 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms