RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 TMEM56Q96MV1 263 aa3.08□□□□□ -1.92
CNOT4-202ENST00000356162 FYTTD1Q96QD9 318 aaKnown RBP3.08□□□□□ -1.92
CNOT4-202ENST00000356162 P2RX4Q99571 388 aa3.08□□□□□ -1.92
CNOT4-202ENST00000356162 GPR61Q9BZJ8 451 aa3.08□□□□□ -1.92
CNOT4-202ENST00000356162 KLK15Q9H2R5 256 aa3.08□□□□□ -1.92
CNOT4-202ENST00000356162 KCNIP3Q9Y2W7 256 aa3.08□□□□□ -1.92
CNOT4-202ENST00000356162 OR51B2Q9Y5P1 312 aa3.08□□□□□ -1.92
CNOT4-202ENST00000356162 TMEM56-RWDD3S4R434 201 aa3.08□□□□□ -1.92
CNOT4-202ENST00000356162 TRBV9A0A0B4J1U6 114 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 IGLC7A0M8Q6 106 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 HMX3A6NHT5 357 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 CGB1A6NKQ9 187 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 I3L521 148 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 LYRM1O43325 122 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 CDS2O95674 445 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 OR8U8P0C7N1 319 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 MYOD1P15172 320 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 CTRB1P17538 263 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 PRCDQ00LT1 54 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 EXOSC2Q13868 293 aaKnown RBP3.07□□□□□ -1.92
CNOT4-202ENST00000356162 AARDQ4LEZ3 155 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 CTRB2Q6GPI1 263 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 ZNF429Q86V71 674 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 SELENOHQ8IZQ5 122 aaKnown RBP3.07□□□□□ -1.92
CNOT4-202ENST00000356162 LGI3Q8N145 548 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 ZNF114Q8NC26 417 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 OR5T1Q8NG75 326 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 LHFPL5Q8TAF8 219 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 RRNAD1Q96FB5 475 aaKnown RBP3.07□□□□□ -1.92
CNOT4-202ENST00000356162 RAX2Q96IS3 184 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 C20orf173Q96LM9 149 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 NDUFA4L2Q9NRX3 87 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 ZNF355PQ9NSJ1 428 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 CACFD1Q9UGQ2 172 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 PLXNB1O43157 2135 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 A0A0B4J2A0 478 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 TEX50A0A1B0GTY4 177 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 INS-IGF2F8WCM5 200 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 LINC01619G3V211 115 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 CCL24O00175 119 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 UPK1BO75841 260 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 SFT2D2O95562 160 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 DUS4LO95620 317 aaKnown RBP3.07□□□□□ -1.92
CNOT4-202ENST00000356162 AREGP15514 252 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 AKR1C4P17516 323 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 MECP2P51608 486 aaKnown RBP3.07□□□□□ -1.92
CNOT4-202ENST00000356162 CCR6P51684 374 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 SUPT4H1P63272 117 aaKnown RBP3.07□□□□□ -1.92
CNOT4-202ENST00000356162 RHOGP84095 191 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 ZNF616Q08AN1 781 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 ASAH1Q13510 395 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 SP6Q3SY56 376 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 TMEM128Q5BJH2 165 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 TMEM268Q5VZI3 342 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 MZT2BQ6NZ67 158 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 TMED4Q7Z7H5 227 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 SLC35G3Q8N808 338 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 LRTM2Q8N967 370 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 NECAP1Q8NC96 275 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 OR1L6Q8NGR2 347 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 GLYATL2Q8WU03 294 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 RCC1LQ96I51 464 aaKnown RBP3.07□□□□□ -1.92
CNOT4-202ENST00000356162 PDCD10Q9BUL8 212 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 MCRIP2Q9BUT9 160 aaKnown RBP3.07□□□□□ -1.92
CNOT4-202ENST00000356162 KRTAP4-5Q9BYR2 181 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 C20orf85Q9H1P6 137 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 PLEKHA3Q9HB20 300 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 SHPKQ9UHJ6 478 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 NSG2Q9Y328 171 aa3.07□□□□□ -1.92
CNOT4-202ENST00000356162 IGLV11-55A0A075B6I3 123 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.06□□□□□ -1.92
CNOT4-202ENST00000356162 A0A0G2JRQ6 117 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 E7EUB6 86 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 PLA2G10O15496 165 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 ST8SIA3O43173 380 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 RBMXL2O75526 392 aaKnown RBP3.06□□□□□ -1.92
CNOT4-202ENST00000356162 HSPB1P04792 205 aaKnown RBP3.06□□□□□ -1.92
CNOT4-202ENST00000356162 APELAP0DMC3 54 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 SULT1A3P0DMM9 295 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 SULT1A4P0DMN0 295 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 SLC25A6P12236 298 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 ZP3P21754 424 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 HOXA1P49639 335 aaPredicted RBP3.06□□□□□ -1.92
CNOT4-202ENST00000356162 HSPE1P61604 102 aaKnown RBP3.06□□□□□ -1.92
CNOT4-202ENST00000356162 ATP5G2Q06055 141 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 PPP1R1AQ13522 171 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 DEFB136Q30KP8 78 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 PDLIM3Q53GG5 364 aaPredicted RBP3.06□□□□□ -1.92
CNOT4-202ENST00000356162 NMSQ5H8A3 153 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 ZNF343Q6P1L6 599 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 C16orf54Q6UWD8 224 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 OR2C3Q8N628 320 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 WFDC9Q8NEX5 89 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 OR1N2Q8NGR9 330 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 OR52E5Q8NH55 327 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 DPF1Q92782 380 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 EEF1AKMT3Q96AZ1 226 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 MS4A10Q96PG2 267 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 TBC1D24Q9ULP9 559 aa3.06□□□□□ -1.92
CNOT4-202ENST00000356162 F11RQ9Y624 299 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms