RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 GALMQ96C23 342 aa11.72□□□□□ -0.53
RLIM-202ENST00000349225 ZNF331Q9NQX6 463 aaPredicted RBP11.72□□□□□ -0.53
RLIM-202ENST00000349225 CEP192Q8TEP8 1941 aa11.72□□□□□ -0.53
RLIM-202ENST00000349225 PPOXP50336 477 aa11.72□□□□□ -0.53
RLIM-202ENST00000349225 AESQ08117 197 aa11.72□□□□□ -0.53
RLIM-202ENST00000349225 FOXF2Q12947 444 aa11.72□□□□□ -0.53
RLIM-202ENST00000349225 FAM216AQ8WUB2 273 aa11.72□□□□□ -0.53
RLIM-202ENST00000349225 PKIBQ9C010 78 aa11.72□□□□□ -0.53
RLIM-202ENST00000349225 HEYLQ9NQ87 328 aaPredicted RBP11.72□□□□□ -0.53
RLIM-202ENST00000349225 IGHV1-24A0A0C4DH33 117 aa11.71□□□□□ -0.53
RLIM-202ENST00000349225 J3QT63 122 aa11.71□□□□□ -0.53
RLIM-202ENST00000349225 SP1P08047 785 aa11.71□□□□□ -0.53
RLIM-202ENST00000349225 MOB3BQ86TA1 216 aa11.71□□□□□ -0.53
RLIM-202ENST00000349225 TPRX1Q8N7U7 411 aa11.71□□□□□ -0.53
RLIM-202ENST00000349225 DNPH1O43598 174 aa11.71□□□□□ -0.54
RLIM-202ENST00000349225 SMIM21Q3B7S5 101 aa11.71□□□□□ -0.54
RLIM-202ENST00000349225 WIPI1Q5MNZ9 446 aaPredicted RBP11.71□□□□□ -0.54
RLIM-202ENST00000349225 CT55Q8WUE5 264 aa11.71□□□□□ -0.54
RLIM-202ENST00000349225 NINJ1Q92982 152 aa11.71□□□□□ -0.54
RLIM-202ENST00000349225 CLUHP3Q96NS8 147 aa11.71□□□□□ -0.54
RLIM-202ENST00000349225 KCNIP1Q9NZI2 227 aa11.71□□□□□ -0.54
RLIM-202ENST00000349225 FAM231BA6NCW3 169 aa11.7□□□□□ -0.54
RLIM-202ENST00000349225 CD27P26842 260 aa11.7□□□□□ -0.54
RLIM-202ENST00000349225 LGALS7P47929 136 aa11.7□□□□□ -0.54
RLIM-202ENST00000349225 SLC25A40Q8TBP6 338 aa11.7□□□□□ -0.54
RLIM-202ENST00000349225 SAP30LQ9HAJ7 183 aa11.7□□□□□ -0.54
RLIM-202ENST00000349225 NPVFQ9HCQ7 196 aa11.7□□□□□ -0.54
RLIM-202ENST00000349225 ANKRD30BLA7E2S9 258 aa11.7□□□□□ -0.54
RLIM-202ENST00000349225 SNAI2O43623 268 aa11.7□□□□□ -0.54
RLIM-202ENST00000349225 MRPL14Q6P1L8 145 aaKnown RBP11.7□□□□□ -0.54
RLIM-202ENST00000349225 PMCHL2Q9BQD1 86 aa11.7□□□□□ -0.54
RLIM-202ENST00000349225 FNDC4Q9H6D8 234 aaPredicted RBP11.7□□□□□ -0.54
RLIM-202ENST00000349225 WDR54Q9H977 334 aa11.7□□□□□ -0.54
RLIM-202ENST00000349225 IGKV1OR2-108A0A075B7D4 117 aa11.7□□□□□ -0.54
RLIM-202ENST00000349225 OR2J3O76001 311 aa11.7□□□□□ -0.54
RLIM-202ENST00000349225 CAMPP49913 170 aa11.7□□□□□ -0.54
RLIM-202ENST00000349225 ZNF146Q15072 292 aa11.7□□□□□ -0.54
RLIM-202ENST00000349225 C12orf54Q6X4T0 127 aa11.7□□□□□ -0.54
RLIM-202ENST00000349225 SNRNP40Q96DI7 357 aaKnown RBP11.7□□□□□ -0.54
RLIM-202ENST00000349225 COQ2Q96H96 371 aa11.7□□□□□ -0.54
RLIM-202ENST00000349225 TAAR6Q96RI8 345 aa11.7□□□□□ -0.54
RLIM-202ENST00000349225 NAA38Q9BRA0 125 aaKnown RBP11.7□□□□□ -0.54
RLIM-202ENST00000349225 ZFHX4Q86UP3 3567 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 IGHV1-45A0A0A0MS14 117 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 C7orf71A4D174 169 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 NXPH1P58417 271 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 TEPPQ6URK8 271 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 RFESDQ8TAC1 157 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 HSD17B10Q99714 261 aaKnown RBP11.69□□□□□ -0.54
RLIM-202ENST00000349225 PSG11Q9UQ72 335 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 MPC1Q9Y5U8 109 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 GJE1A6NN92 205 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 FOXA3P55318 350 aaPredicted RBP11.69□□□□□ -0.54
RLIM-202ENST00000349225 PAX2Q02962 417 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 MORN5Q5VZ52 161 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 IMMP1LQ96LU5 166 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 FAM234AQ9H0X4 552 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 C1RLQ9NZP8 487 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 PRSS47A8MTI9 375 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 WNT9BO14905 357 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 FCGR3BO75015 233 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 MT-CO3P00414 261 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 MRPL49Q13405 166 aaKnown RBP11.69□□□□□ -0.54
RLIM-202ENST00000349225 GCM1Q9NP62 436 aa11.69□□□□□ -0.54
RLIM-202ENST00000349225 PEF1Q9UBV8 284 aaKnown RBP11.69□□□□□ -0.54
RLIM-202ENST00000349225 PPIAL4DF5H284 164 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 MT-CO2P00403 227 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 PPIAL4GP0DN37 164 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 MYOD1P15172 320 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 DUTP33316 252 aaKnown RBP11.68□□□□□ -0.54
RLIM-202ENST00000349225 GABRA6Q16445 453 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 ALKBH6Q3KRA9 238 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 C5orf17Q8NAS9 161 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 OR4S2Q8NH73 311 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 DCTN5Q9BTE1 182 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 SSR4P51571 173 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 PRAMEF5Q5TYX0 476 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 PRAMEF6Q5VXH4 476 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 VWA1Q6PCB0 445 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 C16orf54Q6UWD8 224 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 COX6A1P12074 109 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 TCF24Q7RTU0 167 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 TSTD1Q8NFU3 115 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 OR1N2Q8NGR9 330 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 CHRDL1Q9BU40 450 aa11.68□□□□□ -0.54
RLIM-202ENST00000349225 A0A1B0GXF2 115 aa11.67□□□□□ -0.54
RLIM-202ENST00000349225 HAND1O96004 215 aa11.67□□□□□ -0.54
RLIM-202ENST00000349225 NRN1LQ496H8 165 aa11.67□□□□□ -0.54
RLIM-202ENST00000349225 HLA-DRB1P01911 266 aa11.67□□□□□ -0.54
RLIM-202ENST00000349225 CD46P15529 392 aa11.67□□□□□ -0.54
RLIM-202ENST00000349225 RASL11AQ6T310 242 aa11.67□□□□□ -0.54
RLIM-202ENST00000349225 LINC00696Q6ZRV3 163 aa11.67□□□□□ -0.54
RLIM-202ENST00000349225 C1orf229Q6ZS94 237 aaPredicted RBP11.67□□□□□ -0.54
RLIM-202ENST00000349225 UBALD2Q8IYN6 164 aa11.67□□□□□ -0.54
RLIM-202ENST00000349225 WDR31Q8NA23 367 aa11.67□□□□□ -0.54
RLIM-202ENST00000349225 NABP2Q9BQ15 211 aa11.67□□□□□ -0.54
RLIM-202ENST00000349225 SLC25A10Q9UBX3 287 aaPredicted RBP11.67□□□□□ -0.54
RLIM-202ENST00000349225 METRNQ9UJH8 293 aa11.67□□□□□ -0.54
RLIM-202ENST00000349225 GAGE10A6NGK3 116 aa11.66□□□□□ -0.54
RLIM-202ENST00000349225 HIGD1CA8MV81 97 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms