RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 LEPP41159 167 aa16.53■□□□□ 0.24
HDAC4-201ENST00000345617 OR9G1Q8NH87 305 aa16.53■□□□□ 0.24
HDAC4-201ENST00000345617 F2Z2F3 143 aa16.53■□□□□ 0.24
HDAC4-201ENST00000345617 SRP19P09132 144 aaKnown RBP16.52■□□□□ 0.24
HDAC4-201ENST00000345617 SLC25A15Q9Y619 301 aa16.52■□□□□ 0.24
HDAC4-201ENST00000345617 IFI27P40305 119 aaPredicted RBP16.52■□□□□ 0.24
HDAC4-201ENST00000345617 WDR82Q6UXN9 313 aa16.52■□□□□ 0.24
HDAC4-201ENST00000345617 FAM57AQ8TBR7 257 aa16.52■□□□□ 0.24
HDAC4-201ENST00000345617 GDF15Q99988 308 aa16.52■□□□□ 0.24
HDAC4-201ENST00000345617 A0A0G2JLM5 398 aa16.52■□□□□ 0.24
HDAC4-201ENST00000345617 C2CD4DB7Z1M9 353 aa16.52■□□□□ 0.24
HDAC4-201ENST00000345617 ZG16O60844 167 aa16.52■□□□□ 0.24
HDAC4-201ENST00000345617 SRSF1Q07955 248 aaKnown RBP eCLIP16.52■□□□□ 0.24
HDAC4-201ENST00000345617 RPRMQ9NS64 109 aa16.52■□□□□ 0.24
HDAC4-201ENST00000345617 FAM90A9PA6NNJ1 464 aa16.52■□□□□ 0.23
HDAC4-201ENST00000345617 PSG4Q00888 419 aa16.52■□□□□ 0.23
HDAC4-201ENST00000345617 SLC25A53Q5H9E4 307 aa16.52■□□□□ 0.23
HDAC4-201ENST00000345617 IGHV3-21A0A0B4J1V1 117 aa16.52■□□□□ 0.23
HDAC4-201ENST00000345617 CLEC2AQ6UVW9 174 aa16.52■□□□□ 0.23
HDAC4-201ENST00000345617 A0A1W2PPV9 198 aa16.52■□□□□ 0.23
HDAC4-201ENST00000345617 NR2C2APQ86WQ0 139 aa16.52■□□□□ 0.23
HDAC4-201ENST00000345617 SERF1AO75920 110 aa16.51■□□□□ 0.23
HDAC4-201ENST00000345617 SIRT4Q9Y6E7 314 aaPredicted RBP16.51■□□□□ 0.23
HDAC4-201ENST00000345617 ZNF815PA8K554 130 aa16.51■□□□□ 0.23
HDAC4-201ENST00000345617 BHLHA9Q7RTU4 235 aa16.51■□□□□ 0.23
HDAC4-201ENST00000345617 LHFPL6Q9Y693 200 aa16.51■□□□□ 0.23
HDAC4-201ENST00000345617 PRR33A8MZF0 331 aa16.51■□□□□ 0.23
HDAC4-201ENST00000345617 RHOGP84095 191 aa16.51■□□□□ 0.23
HDAC4-201ENST00000345617 MORN3Q6PF18 240 aaPredicted RBP16.51■□□□□ 0.23
HDAC4-201ENST00000345617 ZPLD1Q8TCW7 415 aa16.51■□□□□ 0.23
HDAC4-201ENST00000345617 C18orf15Q96N68 181 aa16.51■□□□□ 0.23
HDAC4-201ENST00000345617 PLAUP00749 431 aa16.51■□□□□ 0.23
HDAC4-201ENST00000345617 CCL3P10147 92 aa16.51■□□□□ 0.23
HDAC4-201ENST00000345617 NBEAP1P0C6P0 100 aa16.51■□□□□ 0.23
HDAC4-201ENST00000345617 NRN1LQ496H8 165 aa16.51■□□□□ 0.23
HDAC4-201ENST00000345617 RFLNBQ8N5W9 214 aa16.51■□□□□ 0.23
HDAC4-201ENST00000345617 R4GN57 208 aa16.51■□□□□ 0.23
HDAC4-201ENST00000345617 ZNF205O95201 554 aa16.5■□□□□ 0.23
HDAC4-201ENST00000345617 STARD6P59095 220 aa16.5■□□□□ 0.23
HDAC4-201ENST00000345617 SLC25A47Q6Q0C1 308 aa16.5■□□□□ 0.23
HDAC4-201ENST00000345617 PCSK4Q6UW60 755 aa16.5■□□□□ 0.23
HDAC4-201ENST00000345617 TM2D1Q9BX74 207 aa16.5■□□□□ 0.23
HDAC4-201ENST00000345617 DLL3Q9NYJ7 618 aa16.5■□□□□ 0.23
HDAC4-201ENST00000345617 FAM90A1Q86YD7 464 aa16.5■□□□□ 0.23
HDAC4-201ENST00000345617 AHRRA9YTQ3 701 aa16.5■□□□□ 0.23
HDAC4-201ENST00000345617 WFDC3Q8IUB2 231 aa16.5■□□□□ 0.23
HDAC4-201ENST00000345617 FAM60AQ9NP50 221 aa16.5■□□□□ 0.23
HDAC4-201ENST00000345617 FAM214BQ7L5A3 538 aa16.49■□□□□ 0.23
HDAC4-201ENST00000345617 DLX4Q92988 240 aaPredicted RBP16.49■□□□□ 0.23
HDAC4-201ENST00000345617 GP6Q9HCN6 339 aa16.49■□□□□ 0.23
HDAC4-201ENST00000345617 CGB1A6NKQ9 187 aa16.49■□□□□ 0.23
HDAC4-201ENST00000345617 FOXI3A8MTJ6 420 aaPredicted RBP16.49■□□□□ 0.23
HDAC4-201ENST00000345617 WNT2BQ93097 391 aa16.49■□□□□ 0.23
HDAC4-201ENST00000345617 ESDP10768 282 aa16.49■□□□□ 0.23
HDAC4-201ENST00000345617 FER1L6-AS1Q8NA97 138 aa16.49■□□□□ 0.23
HDAC4-201ENST00000345617 DNAJC30Q96LL9 226 aa16.49■□□□□ 0.23
HDAC4-201ENST00000345617 UCNP55089 124 aa16.48■□□□□ 0.23
HDAC4-201ENST00000345617 UNQ5815/PRO19632Q6UWF5 114 aa16.48■□□□□ 0.23
HDAC4-201ENST00000345617 TMEM171Q8WVE6 324 aa16.48■□□□□ 0.23
HDAC4-201ENST00000345617 TTTY12Q9BZ98 90 aa16.48■□□□□ 0.23
HDAC4-201ENST00000345617 PCDH15Q96QU1 1955 aa16.48■□□□□ 0.23
HDAC4-201ENST00000345617 TMEM14DPA8MWL7 114 aa16.48■□□□□ 0.23
HDAC4-201ENST00000345617 UCP1P25874 307 aa16.48■□□□□ 0.23
HDAC4-201ENST00000345617 TRIP6Q15654 476 aaKnown RBP16.48■□□□□ 0.23
HDAC4-201ENST00000345617 FNDC4Q9H6D8 234 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-201ENST00000345617 IGHV5-10-1A0A0J9YXX1 117 aa16.48■□□□□ 0.23
HDAC4-201ENST00000345617 DCAF10Q5QP82 559 aa16.48■□□□□ 0.23
HDAC4-201ENST00000345617 NDUFA3O95167 84 aa16.48■□□□□ 0.23
HDAC4-201ENST00000345617 TMEM249Q2WGJ8 235 aa16.48■□□□□ 0.23
HDAC4-201ENST00000345617 IGLV1-36A0A0B4J1U3 117 aa16.48■□□□□ 0.23
HDAC4-201ENST00000345617 A0A1B0GW64 132 aa16.47■□□□□ 0.23
HDAC4-201ENST00000345617 CFAP161Q6P656 301 aa16.47■□□□□ 0.23
HDAC4-201ENST00000345617 NHP2Q9NX24 153 aaKnown RBP16.47■□□□□ 0.23
HDAC4-201ENST00000345617 IGHV1OR15-9A0A0B4J2B8 117 aa16.47■□□□□ 0.23
HDAC4-201ENST00000345617 ZNF562Q6V9R5 426 aa16.47■□□□□ 0.23
HDAC4-201ENST00000345617 SSBP3Q9BWW4 388 aaPredicted RBP16.47■□□□□ 0.23
HDAC4-201ENST00000345617 OSTCQ9NRP0 149 aa16.47■□□□□ 0.23
HDAC4-201ENST00000345617 TMEM74BQ9NUR3 256 aa16.47■□□□□ 0.23
HDAC4-201ENST00000345617 SEMA5BQ9P283 1151 aa16.47■□□□□ 0.23
HDAC4-201ENST00000345617 HS3ST3B1Q9Y662 390 aa16.47■□□□□ 0.23
HDAC4-201ENST00000345617 NRXN2Q9P2S2 1712 aa16.47■□□□□ 0.23
HDAC4-201ENST00000345617 ZNF688P0C7X2 276 aa16.47■□□□□ 0.23
HDAC4-201ENST00000345617 IL11P20809 199 aa16.47■□□□□ 0.23
HDAC4-201ENST00000345617 CCL20P78556 96 aa16.47■□□□□ 0.23
HDAC4-201ENST00000345617 HRKO00198 91 aa16.47■□□□□ 0.23
HDAC4-201ENST00000345617 PIMREGQ9BSJ6 248 aa16.47■□□□□ 0.23
HDAC4-201ENST00000345617 HILPDAQ9Y5L2 63 aa16.46■□□□□ 0.23
HDAC4-201ENST00000345617 ASPHD2Q6ICH7 369 aa16.46■□□□□ 0.23
HDAC4-201ENST00000345617 C1QTNF9P0C862 333 aa16.46■□□□□ 0.23
HDAC4-201ENST00000345617 FOXA3P55318 350 aaPredicted RBP16.46■□□□□ 0.23
HDAC4-201ENST00000345617 HEPN1Q6WQI6 88 aa16.46■□□□□ 0.23
HDAC4-201ENST00000345617 COQ2Q96H96 371 aa16.46■□□□□ 0.23
HDAC4-201ENST00000345617 HIST1H2BLQ99880 126 aa16.46■□□□□ 0.23
HDAC4-201ENST00000345617 ZNF479Q96JC4 524 aa16.46■□□□□ 0.23
HDAC4-201ENST00000345617 CCL13Q99616 98 aa16.46■□□□□ 0.23
HDAC4-201ENST00000345617 FNDC1Q4ZHG4 1894 aaPredicted RBP16.46■□□□□ 0.23
HDAC4-201ENST00000345617 TNFSF13O75888 250 aa16.46■□□□□ 0.23
HDAC4-201ENST00000345617 ZNF703Q9H7S9 590 aaPredicted RBP16.46■□□□□ 0.23
HDAC4-201ENST00000345617 IL6RP08887 468 aaPredicted RBP16.46■□□□□ 0.22
HDAC4-201ENST00000345617 TMEM229AB2RXF0 380 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 418.9 ms