RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 IGHV2-26A0A0B4J1V2 119 aa13.62□□□□□ -0.23
SMARCA4-201ENST00000344626 F12P00748 615 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-201ENST00000344626 SAMD13Q5VXD3 122 aa13.62□□□□□ -0.23
SMARCA4-201ENST00000344626 SMDT1Q9H4I9 107 aa13.62□□□□□ -0.23
SMARCA4-201ENST00000344626 UPK2O00526 184 aa13.62□□□□□ -0.23
SMARCA4-201ENST00000344626 IGHV1-8P0DP01 117 aa13.62□□□□□ -0.23
SMARCA4-201ENST00000344626 TMEM200BQ69YZ2 307 aa13.62□□□□□ -0.23
SMARCA4-201ENST00000344626 TMEM18Q96B42 140 aa13.62□□□□□ -0.23
SMARCA4-201ENST00000344626 TIMM23O14925 209 aa13.62□□□□□ -0.23
SMARCA4-201ENST00000344626 SAA1P0DJI8 122 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-201ENST00000344626 MYOD1P15172 320 aa13.62□□□□□ -0.23
SMARCA4-201ENST00000344626 IGFL2Q6UWQ7 119 aa13.62□□□□□ -0.23
SMARCA4-201ENST00000344626 CYP2G1PQ6ZSU1 146 aa13.62□□□□□ -0.23
SMARCA4-201ENST00000344626 DOPEY1Q5JWR5 2465 aa13.61□□□□□ -0.23
SMARCA4-201ENST00000344626 CACNG8Q8WXS5 425 aa13.61□□□□□ -0.23
SMARCA4-201ENST00000344626 LOC102723971A0A1B0GUV8 181 aa13.61□□□□□ -0.23
SMARCA4-201ENST00000344626 MGPP08493 103 aa13.61□□□□□ -0.23
SMARCA4-201ENST00000344626 SEC11CQ9BY50 192 aa13.61□□□□□ -0.23
SMARCA4-201ENST00000344626 PRORYQ9H606 182 aa13.61□□□□□ -0.23
SMARCA4-201ENST00000344626 IGHV3-23P01764 117 aa13.61□□□□□ -0.23
SMARCA4-201ENST00000344626 TUSC1Q2TAM9 212 aa13.61□□□□□ -0.23
SMARCA4-201ENST00000344626 DMRTC2Q8IXT2 367 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-201ENST00000344626 WNT10AQ9GZT5 417 aa13.61□□□□□ -0.23
SMARCA4-201ENST00000344626 DKK4Q9UBT3 224 aa13.61□□□□□ -0.23
SMARCA4-201ENST00000344626 TMEM189A5PLL7 270 aa13.61□□□□□ -0.23
SMARCA4-201ENST00000344626 IFITM3Q01628 133 aa13.61□□□□□ -0.23
SMARCA4-201ENST00000344626 AMTP48728 403 aa13.6□□□□□ -0.23
SMARCA4-201ENST00000344626 NABP2Q9BQ15 211 aa13.6□□□□□ -0.23
SMARCA4-201ENST00000344626 REG4Q9BYZ8 158 aa13.6□□□□□ -0.23
SMARCA4-201ENST00000344626 HELZP42694 1942 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-201ENST00000344626 TMEM42Q69YG0 159 aa13.6□□□□□ -0.23
SMARCA4-201ENST00000344626 NRGNQ92686 78 aa13.6□□□□□ -0.23
SMARCA4-201ENST00000344626 BCL2P10415 239 aa13.6□□□□□ -0.23
SMARCA4-201ENST00000344626 OTX1P32242 354 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-201ENST00000344626 ARFGEF3Q5TH69 2177 aa13.6□□□□□ -0.23
SMARCA4-201ENST00000344626 NDUFS7O75251 213 aa13.6□□□□□ -0.23
SMARCA4-201ENST00000344626 GPR183P32249 361 aa13.6□□□□□ -0.23
SMARCA4-201ENST00000344626 SULT1A2P50226 295 aa13.6□□□□□ -0.23
SMARCA4-201ENST00000344626 RNF212Q495C1 297 aa13.6□□□□□ -0.23
SMARCA4-201ENST00000344626 IGKV1-12A0A0C4DH73 117 aa13.59□□□□□ -0.23
SMARCA4-201ENST00000344626 ZNF207O43670 478 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-201ENST00000344626 IGKV1D-12P01611 117 aa13.59□□□□□ -0.23
SMARCA4-201ENST00000344626 CLEC19AQ6UXS0 136 aa13.59□□□□□ -0.23
SMARCA4-201ENST00000344626 FOXA2Q9Y261 457 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-201ENST00000344626 CD99P14209 185 aa13.59□□□□□ -0.23
SMARCA4-201ENST00000344626 SRSF12Q8WXF0 261 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-201ENST00000344626 RNF5Q99942 180 aa13.59□□□□□ -0.23
SMARCA4-201ENST00000344626 CGB1A6NKQ9 187 aa13.59□□□□□ -0.23
SMARCA4-201ENST00000344626 TBL2Q9Y4P3 447 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-201ENST00000344626 SNCGO76070 127 aa13.59□□□□□ -0.23
SMARCA4-201ENST00000344626 IGHV3OR16-8A0A075B7F1 116 aa13.59□□□□□ -0.23
SMARCA4-201ENST00000344626 CD177Q8N6Q3 437 aa13.59□□□□□ -0.23
SMARCA4-201ENST00000344626 OR2D3Q8NGH3 330 aa13.59□□□□□ -0.23
SMARCA4-201ENST00000344626 RRHO14718 337 aa13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 RNASEKQ6P5S7 137 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 CLDND2Q8NHS1 167 aa13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 ANGPTL6Q8NI99 470 aa13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 IGKV3-20P01619 116 aa13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 GAFA1Q96PS6 74 aa13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 SPRY4Q9C004 299 aa13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 HSPB7Q9UBY9 170 aa13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 RPS20P60866 119 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 TPTE2P1Q5T6R2 138 aa13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 TMEM88Q6PEY1 159 aa13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 IL17RELQ6ZVW7 336 aa13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 CDC42EP3Q9UKI2 254 aa13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 SCN8AQ9UQD0 1980 aa13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 ISLRO14498 428 aa13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 NPFFO15130 113 aa13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 GPX1P07203 203 aa13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 G0S2P27469 103 aa13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 RTBDNQ9BSG5 229 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 ZMAT5Q9UDW3 170 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 KLF2Q9Y5W3 355 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-201ENST00000344626 TMSB15BA0A087X1C1 80 aa13.57□□□□□ -0.24
SMARCA4-201ENST00000344626 FCER1GP30273 86 aa13.57□□□□□ -0.24
SMARCA4-201ENST00000344626 GPX4P36969 197 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-201ENST00000344626 FAM74A7A6NL05 159 aa13.57□□□□□ -0.24
SMARCA4-201ENST00000344626 A8MWL6 223 aa13.57□□□□□ -0.24
SMARCA4-201ENST00000344626 TCL1AP56279 114 aa13.57□□□□□ -0.24
SMARCA4-201ENST00000344626 FAM90A9PA6NNJ1 464 aa13.57□□□□□ -0.24
SMARCA4-201ENST00000344626 LILRA1O75019 489 aa13.57□□□□□ -0.24
SMARCA4-201ENST00000344626 ITLN2Q8WWU7 325 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-201ENST00000344626 FAM210BQ96KR6 192 aa13.57□□□□□ -0.24
SMARCA4-201ENST00000344626 BEX4Q9NWD9 120 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-201ENST00000344626 ZNF324BQ6AW86 544 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-201ENST00000344626 STPG2Q8N412 459 aa13.57□□□□□ -0.24
SMARCA4-201ENST00000344626 COL4A3Q01955 1670 aa13.57□□□□□ -0.24
SMARCA4-201ENST00000344626 OR9G9P0C7N8 305 aa13.56□□□□□ -0.24
SMARCA4-201ENST00000344626 EGR1P18146 543 aa13.56□□□□□ -0.24
SMARCA4-201ENST00000344626 LINC00305Q7Z4B0 112 aa13.56□□□□□ -0.24
SMARCA4-201ENST00000344626 IGKV1-27A0A075B6S5 117 aa13.56□□□□□ -0.24
SMARCA4-201ENST00000344626 C15orf61A6NNL5 157 aa13.56□□□□□ -0.24
SMARCA4-201ENST00000344626 DUTP33316 252 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-201ENST00000344626 MEOX2P50222 304 aa13.56□□□□□ -0.24
SMARCA4-201ENST00000344626 PSMG3Q9BT73 122 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-201ENST00000344626 AGAP20933 346 aa13.56□□□□□ -0.24
SMARCA4-201ENST00000344626 TMEM37Q8WXS4 190 aa13.56□□□□□ -0.24
SMARCA4-201ENST00000344626 ARL2-SNX15V9GYD0 113 aa13.56□□□□□ -0.24
SMARCA4-201ENST00000344626 POLQO75417 2590 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms