RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 RFPL3SP0C7P2 107 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 CD200R1LQ6Q8B3 271 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 A0A0G2JMM0 328 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 A0A1W2PPB8 328 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 A0A1W2PQM1 296 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 KIR3DP1A8MWS1 328 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 TSPOP30536 169 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 TSPAN7P41732 249 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 FMC1Q96HJ9 113 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 SP7Q8TDD2 431 aaPredicted RBP13.61□□□□□ -0.23
SSRP1-202ENST00000293880 LINC01587Q99440 93 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 TXNDC17Q9BRA2 123 aa13.61□□□□□ -0.23
SSRP1-202ENST00000293880 MARF1Q9Y4F3 1742 aaKnown RBP13.61□□□□□ -0.23
SSRP1-202ENST00000293880 BRWD1Q9NSI6 2320 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 TRAV14DV4A0A0A6YYC5 116 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 TMEM14DPA8MWL7 114 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 FBXL7Q9UJT9 491 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 GAGE13Q4V321 117 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 ACP7Q6ZNF0 438 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 OR13A1Q8NGR1 328 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 MRPL20Q9BYC9 149 aaKnown RBP13.6□□□□□ -0.23
SSRP1-202ENST00000293880 TNFRSF6BO95407 300 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 IFI27L2Q9H2X8 130 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 VCX2Q9H322 139 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 PCM1Q15154 2024 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 HIGD1CA8MV81 97 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 SRD5A1P18405 259 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 FAM90A10PA6NDY2 464 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 FAM90A18PA6NE21 464 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 FAM90A16PA6NEW6 464 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 FAM90A20PA6NIJ5 464 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 FAM90A8PA6NJQ4 464 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 FAM90A7PA6NKC0 464 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 FAM90A22PA8MWA6 464 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 FAM90A12PA8MX19 464 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 FAM90A5PA8MXJ8 464 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 FAM90A23PA8MXZ1 464 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 FAM90A15PP0C7V4 464 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 FAM90A13PP0C7W8 464 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 FAM90A14PP0C7W9 464 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 FAM90A24PP0C7X0 464 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 C1QTNF9P0C862 333 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 LINC01590Q5TEZ4 76 aa13.6□□□□□ -0.23
SSRP1-202ENST00000293880 MRPL52Q86TS9 123 aaKnown RBP13.6□□□□□ -0.23
SSRP1-202ENST00000293880 CELA3BP08861 270 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 CD24P25063 80 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 FAM216BQ8N7L0 139 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 TMEM186Q96B77 213 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 CYSLTR1Q9Y271 337 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 SIPA1L3O60292 1781 aaPredicted RBP13.59□□□□□ -0.23
SSRP1-202ENST00000293880 NBEAP1P0C6P0 100 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 SEMA5BQ9P283 1151 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 CD55P08174 381 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 PCOLCEQ15113 449 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 TIMM23BQ5SRD1 257 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 RNF115Q9Y4L5 304 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 A8MWV9 139 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 OR10J3Q5JRS4 329 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 LCNL1Q6ZST4 164 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 DMRTC2Q8IXT2 367 aaPredicted RBP13.59□□□□□ -0.23
SSRP1-202ENST00000293880 PRDM13Q9H4Q3 707 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 TUBA4BQ9H853 241 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 IZUMO1RA6ND01 250 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 CNTFRP26992 372 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 SAXO1Q8IYX7 474 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 SIGLEC12Q96PQ1 595 aa13.59□□□□□ -0.23
SSRP1-202ENST00000293880 AHRRA9YTQ3 701 aa13.58□□□□□ -0.24
SSRP1-202ENST00000293880 NPIPB4C9JG80 1138 aa13.58□□□□□ -0.24
SSRP1-202ENST00000293880 HS3ST3B1Q9Y662 390 aa13.58□□□□□ -0.24
SSRP1-202ENST00000293880 RBMY1BA6NDE4 496 aaKnown RBP13.58□□□□□ -0.24
SSRP1-202ENST00000293880 RBMY1EA6NEQ0 496 aaKnown RBP13.58□□□□□ -0.24
SSRP1-202ENST00000293880 CD8AP01732 235 aa13.58□□□□□ -0.24
SSRP1-202ENST00000293880 RBMY1DP0C7P1 496 aaKnown RBP13.58□□□□□ -0.24
SSRP1-202ENST00000293880 RBMY1A1P0DJD3 496 aaKnown RBP13.58□□□□□ -0.24
SSRP1-202ENST00000293880 RBMY1CP0DJD4 496 aa13.58□□□□□ -0.24
SSRP1-202ENST00000293880 FXYD7P58549 80 aa13.58□□□□□ -0.24
SSRP1-202ENST00000293880 ZNF625Q96I27 306 aaPredicted RBP13.58□□□□□ -0.24
SSRP1-202ENST00000293880 DEPPQ9NTK1 212 aa13.58□□□□□ -0.24
SSRP1-202ENST00000293880 EPDR1Q9UM22 224 aa13.58□□□□□ -0.24
SSRP1-202ENST00000293880 PSG1P11464 419 aa13.58□□□□□ -0.24
SSRP1-202ENST00000293880 SLC25A15Q9Y619 301 aa13.58□□□□□ -0.24
SSRP1-202ENST00000293880 COL11A2P13942 1736 aaPredicted RBP13.58□□□□□ -0.24
SSRP1-202ENST00000293880 C12orf77C9JDV5 145 aa13.58□□□□□ -0.24
SSRP1-202ENST00000293880 FER1L6-AS1Q8NA97 138 aa13.58□□□□□ -0.24
SSRP1-202ENST00000293880 OR52E5Q8NH55 327 aa13.58□□□□□ -0.24
SSRP1-202ENST00000293880 SHANK3Q9BYB0 1731 aa13.58□□□□□ -0.24
SSRP1-202ENST00000293880 ORAOV1Q8WV07 137 aa13.57□□□□□ -0.24
SSRP1-202ENST00000293880 KNTC1P50748 2209 aa13.57□□□□□ -0.24
SSRP1-202ENST00000293880 MALP21145 153 aa13.57□□□□□ -0.24
SSRP1-202ENST00000293880 PTGDSP41222 190 aa13.57□□□□□ -0.24
SSRP1-202ENST00000293880 FAM27E3Q08E93 113 aa13.57□□□□□ -0.24
SSRP1-202ENST00000293880 ZNF479Q96JC4 524 aa13.57□□□□□ -0.24
SSRP1-202ENST00000293880 TUBGCP6Q96RT7 1819 aa13.57□□□□□ -0.24
SSRP1-202ENST00000293880 STARD6P59095 220 aa13.57□□□□□ -0.24
SSRP1-202ENST00000293880 RAMP3O60896 148 aa13.56□□□□□ -0.24
SSRP1-202ENST00000293880 CEACAM1P13688 526 aa13.56□□□□□ -0.24
SSRP1-202ENST00000293880 GDF15Q99988 308 aa13.56□□□□□ -0.24
SSRP1-202ENST00000293880 CARHSP1Q9Y2V2 147 aaKnown RBP13.56□□□□□ -0.24
SSRP1-202ENST00000293880 PPP1R27Q86WC6 154 aa13.56□□□□□ -0.24
SSRP1-202ENST00000293880 FAM181AQ8N9Y4 354 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms