RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 PRB3Q04118 309 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-201ENST00000291842 TMEM30BQ3MIR4 351 aa14.92□□□□□ -0.02
SHKBP1-201ENST00000291842 DMRTC2Q8IXT2 367 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-201ENST00000291842 PYGO2Q9BRQ0 406 aa14.92□□□□□ -0.02
SHKBP1-201ENST00000291842 FABP4P15090 132 aa14.91□□□□□ -0.02
SHKBP1-201ENST00000291842 DLX1P56177 255 aa14.91□□□□□ -0.02
SHKBP1-201ENST00000291842 PRR20EP86478 221 aa14.91□□□□□ -0.02
SHKBP1-201ENST00000291842 PRR20CP86479 221 aa14.91□□□□□ -0.02
SHKBP1-201ENST00000291842 PRR20DP86480 221 aa14.91□□□□□ -0.02
SHKBP1-201ENST00000291842 PRR20BP86481 221 aa14.91□□□□□ -0.02
SHKBP1-201ENST00000291842 PRR20AP86496 221 aa14.91□□□□□ -0.02
SHKBP1-201ENST00000291842 LRRC10Q5BKY1 277 aa14.91□□□□□ -0.02
SHKBP1-201ENST00000291842 BET1LQ9NYM9 111 aa14.91□□□□□ -0.02
SHKBP1-201ENST00000291842 TACC2O95359 2948 aa14.91□□□□□ -0.02
SHKBP1-201ENST00000291842 F6UZH7 168 aa14.91□□□□□ -0.02
SHKBP1-201ENST00000291842 RD3LP0DJH9 198 aa14.91□□□□□ -0.02
SHKBP1-201ENST00000291842 GAMTQ14353 236 aa14.91□□□□□ -0.02
SHKBP1-201ENST00000291842 OR9G1Q8NH87 305 aa14.91□□□□□ -0.02
SHKBP1-201ENST00000291842 FLYWCH2Q96CP2 140 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-201ENST00000291842 SSUH2Q9Y2M2 353 aa14.91□□□□□ -0.02
SHKBP1-201ENST00000291842 TGOLN2O43493 480 aa14.9□□□□□ -0.02
SHKBP1-201ENST00000291842 C10orf55Q5SWW7 151 aa14.9□□□□□ -0.02
SHKBP1-201ENST00000291842 OR2T10Q8NGZ9 312 aa14.9□□□□□ -0.02
SHKBP1-201ENST00000291842 COMMD5Q9GZQ3 224 aa14.9□□□□□ -0.02
SHKBP1-201ENST00000291842 TNFRSF13BO14836 293 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-201ENST00000291842 NDUFS6O75380 124 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-201ENST00000291842 PLAUP00749 431 aa14.9□□□□□ -0.02
SHKBP1-201ENST00000291842 RNASE2P10153 161 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-201ENST00000291842 LOXP28300 417 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-201ENST00000291842 OR10J1P30954 320 aa14.9□□□□□ -0.02
SHKBP1-201ENST00000291842 OR5AN1Q8NGI8 311 aa14.9□□□□□ -0.02
SHKBP1-201ENST00000291842 OSR1Q8TAX0 266 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-201ENST00000291842 NABP2Q9BQ15 211 aa14.9□□□□□ -0.02
SHKBP1-201ENST00000291842 SLC45A2Q9UMX9 530 aa14.9□□□□□ -0.02
SHKBP1-201ENST00000291842 SPTA1P02549 2419 aa14.89□□□□□ -0.03
SHKBP1-201ENST00000291842 VSTM5A8MXK1 200 aa14.89□□□□□ -0.03
SHKBP1-201ENST00000291842 LYNX1G3V0Z9 82 aa14.89□□□□□ -0.03
SHKBP1-201ENST00000291842 K7ENP7 123 aa14.89□□□□□ -0.03
SHKBP1-201ENST00000291842 IGHV3-48P01763 117 aa14.89□□□□□ -0.03
SHKBP1-201ENST00000291842 LYNX1P0DP58 116 aa14.89□□□□□ -0.03
SHKBP1-201ENST00000291842 RPL8P62917 257 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-201ENST00000291842 PRSS8Q16651 343 aa14.89□□□□□ -0.03
SHKBP1-201ENST00000291842 OR5B3Q8NH48 314 aa14.89□□□□□ -0.03
SHKBP1-201ENST00000291842 OR51M1Q9H341 326 aa14.89□□□□□ -0.03
SHKBP1-201ENST00000291842 FKBP11Q9NYL4 201 aa14.89□□□□□ -0.03
SHKBP1-201ENST00000291842 PLXNB1O43157 2135 aa14.89□□□□□ -0.03
SHKBP1-201ENST00000291842 TMEM144Q7Z5S9 345 aa14.89□□□□□ -0.03
SHKBP1-201ENST00000291842 IGHV3-72A0A0B4J1Y9 119 aa14.88□□□□□ -0.03
SHKBP1-201ENST00000291842 A0A0U1RQK1 487 aa14.88□□□□□ -0.03
SHKBP1-201ENST00000291842 PSG5Q15238 335 aa14.88□□□□□ -0.03
SHKBP1-201ENST00000291842 C2orf83Q53S99 150 aa14.88□□□□□ -0.03
SHKBP1-201ENST00000291842 OR2T6Q8NHC8 308 aa14.88□□□□□ -0.03
SHKBP1-201ENST00000291842 OCC1Q8TAD7 63 aa14.88□□□□□ -0.03
SHKBP1-201ENST00000291842 LINC01560Q8TB33 94 aa14.88□□□□□ -0.03
SHKBP1-201ENST00000291842 TMEM37Q8WXS4 190 aa14.88□□□□□ -0.03
SHKBP1-201ENST00000291842 RITA1Q96K30 269 aa14.88□□□□□ -0.03
SHKBP1-201ENST00000291842 NDUFA4L2Q9NRX3 87 aa14.88□□□□□ -0.03
SHKBP1-201ENST00000291842 FUT9Q9Y231 359 aa14.88□□□□□ -0.03
SHKBP1-201ENST00000291842 TPRP12270 2363 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-201ENST00000291842 NAV3Q8IVL0 2385 aa14.88□□□□□ -0.03
SHKBP1-201ENST00000291842 ELOA3CA0A087WX78 387 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-201ENST00000291842 DCHS2Q6V1P9 2916 aa14.88□□□□□ -0.03
SHKBP1-201ENST00000291842 ACY3Q96HD9 319 aa14.88□□□□□ -0.03
SHKBP1-201ENST00000291842 GGCTO75223 188 aaKnown RBP14.87□□□□□ -0.03
SHKBP1-201ENST00000291842 CTAG1AP78358 180 aa14.87□□□□□ -0.03
SHKBP1-201ENST00000291842 TMEM177Q53S58 311 aa14.87□□□□□ -0.03
SHKBP1-201ENST00000291842 SFRP2Q96HF1 295 aa14.87□□□□□ -0.03
SHKBP1-201ENST00000291842 NGBQ9NPG2 151 aa14.87□□□□□ -0.03
SHKBP1-201ENST00000291842 IGHV1-69-2A0A0G2JMI3 117 aa14.87□□□□□ -0.03
SHKBP1-201ENST00000291842 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-201ENST00000291842 SRP14P37108 136 aaKnown RBP14.87□□□□□ -0.03
SHKBP1-201ENST00000291842 OR4C13Q8NGP0 309 aa14.87□□□□□ -0.03
SHKBP1-201ENST00000291842 TPSG1Q9NRR2 321 aa14.87□□□□□ -0.03
SHKBP1-201ENST00000291842 OR10J4P0C629 311 aa14.86□□□□□ -0.03
SHKBP1-201ENST00000291842 GRNP28799 593 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-201ENST00000291842 SSBP2P81877 361 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-201ENST00000291842 KCNIP4Q6PIL6 250 aa14.86□□□□□ -0.03
SHKBP1-201ENST00000291842 OR1L8Q8NGR8 309 aa14.86□□□□□ -0.03
SHKBP1-201ENST00000291842 PITPNC1Q9UKF7 332 aa14.86□□□□□ -0.03
SHKBP1-201ENST00000291842 NBASA2RRP1 2371 aa14.86□□□□□ -0.03
SHKBP1-201ENST00000291842 ENSAO43768 121 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 IL3RAP26951 378 aa14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 DLX6P56179 175 aa14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 WT1-ASQ06250 92 aa14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 RBPJQ06330 500 aa14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 CD69Q07108 199 aa14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 TXNDC17Q9BRA2 123 aa14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 ZNF430Q9H8G1 570 aaPredicted RBP14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 ZZEF1O43149 2961 aa14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 IGF2RP11717 2491 aa14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 MDFIC2A0A1B0GVS7 189 aa14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 ZNF320A2RRD8 509 aa14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 XKRY2A2RUG3 117 aa14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 CGB1A6NKQ9 187 aa14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 FAM90A27PA6NNH2 459 aa14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 FNDC10F2Z333 226 aa14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 SLC25A17O43808 307 aa14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 OR7C2O60412 319 aa14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 REG1AP05451 166 aa14.85□□□□□ -0.03
SHKBP1-201ENST00000291842 ERHP84090 104 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms