RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 RNASEH2CQ8TDP1 164 aaKnown RBP13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 ST20Q9HBF5 79 aa13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 ABCA1O95477 2261 aa13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 SS18L1O75177 396 aaPredicted RBP13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 NPSP0C0P6 89 aa13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 OR10J3Q5JRS4 329 aa13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 EBLN2Q6P2I7 272 aa13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 IFI27L2Q9H2X8 130 aa13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 RAXQ9Y2V3 346 aa13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 TRBV20OR9-2A0A075B6H5 130 aa13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 C1QTNF9P0C862 333 aa13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 TBR1Q16650 682 aa13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 TMEM160Q9NX00 188 aa13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 PILRBQ9UKJ0 227 aa13.87□□□□□ -0.19
SH3RF1-201ENST00000284637 MIR17HGQ75NE6 70 aa13.86□□□□□ -0.19
SH3RF1-201ENST00000284637 ANKRD36A6QL64 1941 aa13.86□□□□□ -0.19
SH3RF1-201ENST00000284637 TRAV1-1A0A0B4J248 108 aa13.86□□□□□ -0.19
SH3RF1-201ENST00000284637 C18orf12Q96KH6 178 aa13.86□□□□□ -0.19
SH3RF1-201ENST00000284637 LINC00470Q9BZP3 86 aa13.86□□□□□ -0.19
SH3RF1-201ENST00000284637 S4R3C0 116 aa13.86□□□□□ -0.19
SH3RF1-201ENST00000284637 FOXI3A8MTJ6 420 aaPredicted RBP13.86□□□□□ -0.19
SH3RF1-201ENST00000284637 DLX6P56179 175 aa13.86□□□□□ -0.19
SH3RF1-201ENST00000284637 IGKV1D-8A0A087WSZ0 117 aa13.86□□□□□ -0.19
SH3RF1-201ENST00000284637 ABCA7Q8IZY2 2146 aa13.86□□□□□ -0.19
SH3RF1-201ENST00000284637 SIGLEC12Q96PQ1 595 aa13.86□□□□□ -0.19
SH3RF1-201ENST00000284637 REPIN1Q9BWE0 567 aaKnown RBP13.86□□□□□ -0.19
SH3RF1-201ENST00000284637 ZNF319Q9P2F9 582 aa13.86□□□□□ -0.19
SH3RF1-201ENST00000284637 CD55P08174 381 aa13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 APOHP02749 345 aaPredicted RBP13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 C10orf91Q5T1B1 145 aa13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 EP300Q09472 2414 aaPredicted RBP13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 A0A0G2JMM0 328 aa13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 A0A1W2PPB8 328 aa13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 KIR3DP1A8MWS1 328 aa13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 LGALS3P17931 250 aaKnown RBP13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 TMEM171Q8WVE6 324 aa13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 C20orf144Q9BQM9 153 aa13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 RGPD4Q7Z3J3 1758 aa13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 PEX7O00628 323 aa13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 PRSS8Q16651 343 aa13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 MST1LQ2TV78 715 aa13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 TMEM256Q8N2U0 113 aa13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 C1QTNF5Q9BXJ0 243 aa13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 GNB1LQ9BYB4 327 aa13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 POLEQ07864 2286 aa13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 TET1Q8NFU7 2136 aa13.85□□□□□ -0.19
SH3RF1-201ENST00000284637 FAM74A4Q5TZK3 123 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 SHISA5Q8N114 240 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 LOXL4Q96JB6 756 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 ANAPC13Q9BS18 74 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 CHRNA10Q9GZZ6 450 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 A0A1W2PS18 150 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 Q6ZT83 130 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 GPR82Q96P67 336 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 BEX4Q9NWD9 120 aaPredicted RBP13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 ROS1P08922 2347 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 IZUMO1RA6ND01 250 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 PGPEP1LA6NFU8 196 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 DNM1P46Q6ZS02 220 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 RNASE7Q9H1E1 156 aaKnown RBP13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 IFNL4K9M1U5 179 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 GPX1P07203 203 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 FTH1P19P0C7X4 201 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 FOXL1Q12952 345 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 ACTL10Q5JWF8 245 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 OR4X2Q8NGF9 303 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 A0A0A6YYD4 124 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 IGHV1-69-2A0A0G2JMI3 117 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 TEX38Q6PEX7 206 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 PLPPR1Q8TBJ4 325 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 LYZL4Q96KX0 146 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 CLEC7AQ9BXN2 247 aa13.84□□□□□ -0.19
SH3RF1-201ENST00000284637 FREM3P0C091 2139 aa13.83□□□□□ -0.19
SH3RF1-201ENST00000284637 NPIPB6E9PJ23 425 aa13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 ATP5IP56385 69 aaPredicted RBP13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 PRELID3AQ96N28 172 aa13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 ZNF703Q9H7S9 590 aaPredicted RBP13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 OR11H12B2RN74 326 aa13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 C9JQL5 133 aa13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 J3QW42 95 aa13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 SYT8Q8NBV8 401 aa13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 OR11H1Q8NG94 326 aa13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 OR11H2Q8NH07 326 aa13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 COX11Q9Y6N1 276 aa13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 LTBP4Q8N2S1 1624 aa13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 CECR9P0C854 216 aa13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 FAM216BQ8N7L0 139 aa13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 SCN8AQ9UQD0 1980 aa13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 PSG7Q13046 419 aa13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 C19orf54Q5BKX5 351 aa13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 TIMM23BQ5SRD1 257 aa13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 CHODLQ9H9P2 273 aa13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 MRPL16Q9NX20 251 aaKnown RBP13.83□□□□□ -0.2
SH3RF1-201ENST00000284637 PARP14Q460N5 1801 aa13.82□□□□□ -0.2
SH3RF1-201ENST00000284637 IGHV3OR16-12A0A075B7B8 117 aa13.82□□□□□ -0.2
SH3RF1-201ENST00000284637 IGHV3-49A0A0A0MS15 119 aa13.82□□□□□ -0.2
SH3RF1-201ENST00000284637 TRAV24A0A0B4J272 114 aa13.82□□□□□ -0.2
SH3RF1-201ENST00000284637 NAPSAO96009 420 aa13.82□□□□□ -0.2
SH3RF1-201ENST00000284637 CKS1BP61024 79 aa13.82□□□□□ -0.2
SH3RF1-201ENST00000284637 ID3Q02535 119 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms