RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 GCHFRP30047 84 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 LIMS1P48059 325 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 INSL4Q14641 139 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 SCGB3A1Q96QR1 104 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 CHCHD5Q9BSY4 110 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 AICDAQ9GZX7 198 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 TOMM7Q9P0U1 55 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 ZNF257Q9Y2Q1 563 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 V9GYH0 126 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 MYOFQ9NZM1 2061 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 TAF1P21675 1872 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 GGTLC3B5MD39 225 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 OVOL1O14753 267 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 NBEAP1P0C6P0 100 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 SMIM13P0DJ93 91 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 OR10J3Q5JRS4 329 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 S100A7L2Q5SY68 101 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 SPSB3Q6PJ21 355 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 LINC00305Q7Z4B0 112 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 C9orf62Q8N4C0 152 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 PGLYRP4Q96LB8 373 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 TMEM133Q9H2Q1 129 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 KLK15Q9H2R5 256 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 FOXJ2Q9P0K8 574 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 ECM29Q5VYK3 1845 aa3.45□□□□□ -1.86
SCN3A-201ENST00000283254 EFNA4P52798 201 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 CBLN2Q8IUK8 224 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 FAM169BQ8N8A8 192 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 RNF125Q96EQ8 232 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 RNF5Q99942 180 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 RPP21Q9H633 154 aaKnown RBP3.44□□□□□ -1.86
SCN3A-201ENST00000283254 SEPSECSQ9HD40 501 aaKnown RBP3.44□□□□□ -1.86
SCN3A-201ENST00000283254 CHCHD2Q9Y6H1 151 aaPredicted RBP3.44□□□□□ -1.86
SCN3A-201ENST00000283254 FER1L5A0AVI2 2057 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 SCN2AQ99250 2005 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 TRBV5-7A0A0A0MS05 114 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 C12orf77C9JDV5 145 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 PEBP1P30086 187 aaKnown RBP3.44□□□□□ -1.86
SCN3A-201ENST00000283254 SPATA45Q537H7 98 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 TEX45Q8NA69 505 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 POC1AQ8NBT0 407 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 OR2K2Q8NGT1 345 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 PRADC1Q9BSG0 188 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 HDHD3Q9BSH5 251 aaPredicted RBP3.44□□□□□ -1.86
SCN3A-201ENST00000283254 JPT2Q9H910 190 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 AURKAIP1Q9NWT8 199 aaPredicted RBP3.44□□□□□ -1.86
SCN3A-201ENST00000283254 MRPS18BQ9Y676 258 aaKnown RBP3.44□□□□□ -1.86
SCN3A-201ENST00000283254 MYO16Q9Y6X6 1858 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 TMEM50AO95807 157 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 INSP01308 110 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 GATA3P23771 443 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 BMPERQ8N8U9 685 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 OR52E5Q8NH55 327 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 CTHRC1Q96CG8 243 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 ST6GAL2Q96JF0 529 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 ANKRD11Q6UB99 2663 aaPredicted RBP3.44□□□□□ -1.86
SCN3A-201ENST00000283254 GLIPR1P48060 266 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 NANOS3P60323 173 aaKnown RBP3.44□□□□□ -1.86
SCN3A-201ENST00000283254 TGIF1Q15583 401 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 CST9LQ9H4G1 147 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 POLR2AP24928 1970 aaKnown RBP3.44□□□□□ -1.86
SCN3A-201ENST00000283254 A0A1W2PR77 199 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 C7orf71A4D174 169 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 PSCAO43653 123 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 FLNBO75369 2602 aaKnown RBP3.44□□□□□ -1.86
SCN3A-201ENST00000283254 F12P00748 615 aaPredicted RBP3.44□□□□□ -1.86
SCN3A-201ENST00000283254 IGKV1D-16P01601 117 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 CD8AP01732 235 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 CELA2AP08217 269 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 CENPWQ5EE01 88 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 CYP2G1PQ6ZSU1 146 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 BEX4Q9NWD9 120 aaPredicted RBP3.44□□□□□ -1.86
SCN3A-201ENST00000283254 RCC1P18754 421 aaPredicted RBP3.44□□□□□ -1.86
SCN3A-201ENST00000283254 CFHR1Q03591 330 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 DRAM1Q8N682 238 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 TMEM52Q8NDY8 209 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 FDCSPQ8NFU4 85 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 EAF1Q96JC9 268 aaPredicted RBP3.44□□□□□ -1.86
SCN3A-201ENST00000283254 EDA2RQ9HAV5 297 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 SMPXQ9UHP9 88 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 TRAV21A0A0B4J279 112 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 LOC101059948A0A1B0GTJ6 334 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 TMEM238C9JI98 176 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 RRHO14718 337 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 ZG16O60844 167 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 SCTP09683 121 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 MRPL18Q9H0U6 180 aaKnown RBP3.44□□□□□ -1.86
SCN3A-201ENST00000283254 OTORQ9NRC9 128 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 KIAA1551Q9HCM1 1747 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 IGHV3OR16-13A0A075B7E8 117 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 IGHV3-74A0A0B4J1X5 117 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 PEX7O00628 323 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 TRGC2P03986 189 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 ZNF324BQ6AW86 544 aaPredicted RBP3.44□□□□□ -1.86
SCN3A-201ENST00000283254 WDR82Q6UXN9 313 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 ZNF818PQ6ZRF7 136 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 OR9G4Q8NGQ1 327 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 RMI2Q96E14 147 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 ST20Q9HBF5 79 aa3.44□□□□□ -1.86
SCN3A-201ENST00000283254 IGKV1-8A0A0C4DH67 115 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms