RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 CD59P13987 128 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 RAB4AP20338 218 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 COL8A2P25067 703 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 BPIFB3P59826 476 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 FAM27E3Q08E93 113 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 OR10W1Q8NGF6 305 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 FLYWCH2Q96CP2 140 aaKnown RBP3.92□□□□□ -1.78
USP44-201ENST00000258499 C5orf30Q96GV9 206 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 ELOVL5Q9NYP7 299 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 ARL2-SNX15V9GYD0 113 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 SS18L1O75177 396 aaPredicted RBP3.92□□□□□ -1.78
USP44-201ENST00000258499 CNIH1O95406 144 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 APCSP02743 223 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 RPLP1P05386 114 aaKnown RBP3.92□□□□□ -1.78
USP44-201ENST00000258499 PAFAH1B2P68402 229 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 C21orf62-AS1Q17RA5 79 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 WDR73Q6P4I2 378 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 DUX4L9Q6RFH8 374 aaPredicted RBP3.92□□□□□ -1.78
USP44-201ENST00000258499 DMRTC2Q8IXT2 367 aaPredicted RBP3.92□□□□□ -1.78
USP44-201ENST00000258499 GCSAMQ8N6F7 178 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 NPIPB3Q92617 1050 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 EAF1Q96JC9 268 aaPredicted RBP3.92□□□□□ -1.78
USP44-201ENST00000258499 TXNDC17Q9BRA2 123 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 TMEM106BQ9NUM4 274 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 TBL2Q9Y4P3 447 aaKnown RBP3.92□□□□□ -1.78
USP44-201ENST00000258499 CREBBPQ92793 2442 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 FREM2Q5SZK8 3169 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 TRAV5A0A0B4J249 113 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 A0A1W2PNU3 283 aaPredicted RBP3.92□□□□□ -1.78
USP44-201ENST00000258499 HSBP1L1C9JCN9 74 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 M0R2Z0 102 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 CHEK1O14757 476 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 KLK10O43240 276 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 SLC25A17O43808 307 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 C8orf88P0DMB2 117 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 CCL3L1P16619 93 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 TNFRSF1AP19438 455 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 COX7A1P24310 79 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 LMO1P25800 156 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 TFPI2P48307 235 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 RELBQ01201 579 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 ACSF3Q4G176 576 aaPredicted RBP3.92□□□□□ -1.78
USP44-201ENST00000258499 KRTCAP3Q53RY4 240 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 CT45A1Q5HYN5 189 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 C10orf55Q5SWW7 151 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 PEAR1Q5VY43 1037 aaPredicted RBP3.92□□□□□ -1.78
USP44-201ENST00000258499 C10orf113Q5VZT2 155 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 OR1L8Q8NGR8 309 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 OR2T6Q8NHC8 308 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 CT45A3Q8NHU0 189 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 SNRNP40Q96DI7 357 aaKnown RBP3.92□□□□□ -1.78
USP44-201ENST00000258499 PAXXQ9BUH6 204 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 MRPL37Q9BZE1 423 aaKnown RBP3.92□□□□□ -1.78
USP44-201ENST00000258499 SAP30LQ9HAJ7 183 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 GP6Q9HCN6 339 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 SLC25A10Q9UBX3 287 aaPredicted RBP3.92□□□□□ -1.78
USP44-201ENST00000258499 NBEAQ8NFP9 2946 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 MALRD1Q5VYJ5 2156 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 KBTBD11-OT1A0A1B0GTJ5 212 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 A0A1W2PRD5 423 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 A0A1W2PRF3 423 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 A0A1W2PRM7 423 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 C15orf61A6NNL5 157 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 SRRM5B3KS81 715 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 NDUFB3O43676 98 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 NUPR1O60356 82 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 YPEL1O60688 119 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 MOSP00540 346 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 IGKV1-16P04430 117 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 PYYP10082 97 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 ZNF134P52741 427 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 FOXA3P55318 350 aaPredicted RBP3.91□□□□□ -1.78
USP44-201ENST00000258499 RPL8P62917 257 aaKnown RBP3.91□□□□□ -1.78
USP44-201ENST00000258499 TNXAQ16473 311 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 LBHQ53QV2 105 aaPredicted RBP3.91□□□□□ -1.78
USP44-201ENST00000258499 ARSJQ5FYB0 599 aaPredicted RBP3.91□□□□□ -1.78
USP44-201ENST00000258499 WDR31Q8NA23 367 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 LINC00479Q96M42 142 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 YPEL2Q96QA6 119 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 GAL3ST2Q9H3Q3 398 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 AMMECR1Q9Y4X0 333 aaPredicted RBP3.91□□□□□ -1.78
USP44-201ENST00000258499 PRRG2O14669 202 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 RBP4P02753 201 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 CT45A6P0DMU7 189 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 CT45A5P0DMU8 189 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 CT45A7P0DMV0 189 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 GPR6P46095 362 aaPredicted RBP3.91□□□□□ -1.78
USP44-201ENST00000258499 LYZP61626 148 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 HES1Q14469 280 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 VMA21Q3ZAQ7 101 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 SPATA45Q537H7 98 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 TMEM108Q6UXF1 575 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 PDPNQ86YL7 162 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 C11orf53Q8IXP5 236 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 IDI2-AS1Q9NZ38 188 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 PLXNB1O43157 2135 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 ZGRF1Q86YA3 2104 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 TRBV20OR9-2A0A075B6H5 130 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 AHRRA9YTQ3 701 aa3.91□□□□□ -1.78
USP44-201ENST00000258499 FTH1P19P0C7X4 201 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms