RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 TAF15Q92804 592 aaKnown RBP eCLIP7.57□□□□□ -1.2
PDE6A-201ENST00000255266 RSG1Q9BU20 258 aa7.57□□□□□ -1.2
PDE6A-201ENST00000255266 PPP1R3EQ9H7J1 279 aa7.57□□□□□ -1.2
PDE6A-201ENST00000255266 PLXND1Q9Y4D7 1925 aa7.57□□□□□ -1.2
PDE6A-201ENST00000255266 SCO1O75880 301 aa7.57□□□□□ -1.2
PDE6A-201ENST00000255266 RUSC1-AS1Q66K80 236 aa7.57□□□□□ -1.2
PDE6A-201ENST00000255266 AMMECR1LQ6DCA0 310 aa7.57□□□□□ -1.2
PDE6A-201ENST00000255266 CADM3Q8N126 398 aa7.57□□□□□ -1.2
PDE6A-201ENST00000255266 MAPK1IP1LQ8NDC0 245 aa7.57□□□□□ -1.2
PDE6A-201ENST00000255266 LHFPL5Q8TAF8 219 aa7.57□□□□□ -1.2
PDE6A-201ENST00000255266 IGHV2-70P01814 119 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 Q71RC1 249 aaPredicted RBP7.56□□□□□ -1.2
PDE6A-201ENST00000255266 C11orf44Q8N8P7 122 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 OR1P1Q8NH06 330 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 LINC01587Q99440 93 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 SOSTQ9BQB4 213 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 H7C1H1 209 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 SPNP16150 400 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 FGF8P55075 233 aaPredicted RBP7.56□□□□□ -1.2
PDE6A-201ENST00000255266 TUSC1Q2TAM9 212 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 KLHDC3Q9BQ90 382 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 MBNL3Q9NUK0 354 aaKnown RBP7.56□□□□□ -1.2
PDE6A-201ENST00000255266 H0Y8G0 127 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 UBE2DNLQ8IWF7 75 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 PEF1Q9UBV8 284 aaKnown RBP7.56□□□□□ -1.2
PDE6A-201ENST00000255266 RBFOX3A6NFN3 312 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 H0YJW9 148 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 FGF16O43320 207 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 TRGC1P0CF51 173 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 NABP2Q9BQ15 211 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 RBM38Q9H0Z9 239 aaKnown RBP7.56□□□□□ -1.2
PDE6A-201ENST00000255266 VPREB3Q9UKI3 123 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 PHLDA3Q9Y5J5 127 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 SCN8AQ9UQD0 1980 aa7.56□□□□□ -1.2
PDE6A-201ENST00000255266 PGPA6NDG6 321 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 LINC00305Q7Z4B0 112 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 HLA-DRB1P01911 266 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 GRNP28799 593 aaKnown RBP7.55□□□□□ -1.2
PDE6A-201ENST00000255266 FABP9Q0Z7S8 132 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 Q6ZN92 141 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 TP53RKQ96S44 253 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 SLC35B3Q9H1N7 401 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 OVOL1O14753 267 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 AMTP48728 403 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 MIC13Q5XKP0 118 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 FAM53AQ6NSI3 398 aaPredicted RBP7.55□□□□□ -1.2
PDE6A-201ENST00000255266 ASCL4Q6XD76 172 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 LINC00311Q8N616 119 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 HSPB7Q9UBY9 170 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 HEATR5BQ9P2D3 2071 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 AHCTF1Q8WYP5 2266 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 MUC22E2RYF6 1773 aaPredicted RBP7.55□□□□□ -1.2
PDE6A-201ENST00000255266 LOXL1Q08397 574 aaPredicted RBP7.55□□□□□ -1.2
PDE6A-201ENST00000255266 H3BUA1 57 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 SLC31A2O15432 143 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 IGHV4-39P01824 125 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 ELANEP08246 267 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 CD24P25063 80 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 ZNF585BQ52M93 769 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 Q6ZS49 121 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 CHAC2Q8WUX2 184 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 KCNS1Q96KK3 526 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 NOL4LQ96MY1 436 aaPredicted RBP7.55□□□□□ -1.2
PDE6A-201ENST00000255266 FAM103A1Q9BTL3 118 aaKnown RBP7.55□□□□□ -1.2
PDE6A-201ENST00000255266 SDF2L1Q9HCN8 221 aa7.55□□□□□ -1.2
PDE6A-201ENST00000255266 TSSC4Q9Y5U2 329 aaPredicted RBP7.55□□□□□ -1.2
PDE6A-201ENST00000255266 IGKV1-12A0A0C4DH73 117 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 IGKV1D-12P01611 117 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 IL6RP08887 468 aaPredicted RBP7.54□□□□□ -1.2
PDE6A-201ENST00000255266 EFNB1P98172 346 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 TMEM86BQ8N661 226 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 OR1N2Q8NGR9 330 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 TMEM131Q92545 1883 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 PAGE4O60829 102 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 SPTBP11277 2137 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 LMO1P25800 156 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 ATP6V0CP27449 155 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 C19orf35Q6ZS72 473 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 OR10G8Q8NGN5 311 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 FAM210BQ96KR6 192 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 COTL1Q14019 142 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 ZNF79Q15937 498 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 LDLRAD3Q86YD5 345 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 FAM110DQ8TAY7 271 aaPredicted RBP7.54□□□□□ -1.2
PDE6A-201ENST00000255266 PLXNB3Q9ULL4 1909 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 COL5A1P20908 1838 aaPredicted RBP7.54□□□□□ -1.2
PDE6A-201ENST00000255266 IGKV1-27A0A075B6S5 117 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 ISLRO14498 428 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 HOXA3O43365 443 aaPredicted RBP7.54□□□□□ -1.2
PDE6A-201ENST00000255266 TFF1P04155 84 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 SELLP14151 372 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 FAM120AOSQ5T036 256 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 HS3ST6Q96QI5 342 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 PSMG3Q9BT73 122 aaPredicted RBP7.54□□□□□ -1.2
PDE6A-201ENST00000255266 SEC11CQ9BY50 192 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 SMDT1Q9H4I9 107 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 ZMAT4Q9H898 229 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 COL4A3Q01955 1670 aa7.54□□□□□ -1.2
PDE6A-201ENST00000255266 TRGV11A0A075B6L2 103 aa7.53□□□□□ -1.2
PDE6A-201ENST00000255266 TEX50A0A1B0GTY4 177 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms