RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 CACNG8Q8WXS5 425 aa13.13□□□□□ -0.31
UBE3D-201ENST00000237186 ARL2-SNX15V9GYD0 113 aa13.13□□□□□ -0.31
UBE3D-201ENST00000237186 SMG1Q96Q15 3661 aaKnown RBP13.13□□□□□ -0.31
UBE3D-201ENST00000237186 IGHV1-69-2A0A0G2JMI3 117 aa13.12□□□□□ -0.31
UBE3D-201ENST00000237186 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.12□□□□□ -0.31
UBE3D-201ENST00000237186 NDUFB4O95168 129 aa13.12□□□□□ -0.31
UBE3D-201ENST00000237186 GCHFRP30047 84 aa13.12□□□□□ -0.31
UBE3D-201ENST00000237186 GPX4P36969 197 aaPredicted RBP13.12□□□□□ -0.31
UBE3D-201ENST00000237186 SRP14P37108 136 aaKnown RBP13.12□□□□□ -0.31
UBE3D-201ENST00000237186 GALR1P47211 349 aa13.12□□□□□ -0.31
UBE3D-201ENST00000237186 NDUFA6P56556 154 aa13.12□□□□□ -0.31
UBE3D-201ENST00000237186 UBE2G2P60604 165 aa13.12□□□□□ -0.31
UBE3D-201ENST00000237186 LINC01551Q86U37 167 aa13.12□□□□□ -0.31
UBE3D-201ENST00000237186 C11orf42Q8N5U0 333 aa13.12□□□□□ -0.31
UBE3D-201ENST00000237186 FRZBQ92765 325 aa13.12□□□□□ -0.31
UBE3D-201ENST00000237186 SLC35E1Q96K37 410 aa13.12□□□□□ -0.31
UBE3D-201ENST00000237186 OR5B12Q96R08 314 aa13.12□□□□□ -0.31
UBE3D-201ENST00000237186 C19orf24Q9BVV8 132 aa13.12□□□□□ -0.31
UBE3D-201ENST00000237186 COMMD5Q9GZQ3 224 aa13.12□□□□□ -0.31
UBE3D-201ENST00000237186 MT-CO2P00403 227 aa13.12□□□□□ -0.31
UBE3D-201ENST00000237186 TRGC1P0CF51 173 aa13.12□□□□□ -0.31
UBE3D-201ENST00000237186 CD69Q07108 199 aa13.12□□□□□ -0.31
UBE3D-201ENST00000237186 GAMTQ14353 236 aa13.12□□□□□ -0.31
UBE3D-201ENST00000237186 IGKV1OR2-108A0A075B7D4 117 aa13.11□□□□□ -0.31
UBE3D-201ENST00000237186 A0A1W2PN81 502 aa13.11□□□□□ -0.31
UBE3D-201ENST00000237186 IFITM10A6NMD0 228 aa13.11□□□□□ -0.31
UBE3D-201ENST00000237186 GGCTO75223 188 aaKnown RBP13.11□□□□□ -0.31
UBE3D-201ENST00000237186 IGLV2-23P01705 113 aa13.11□□□□□ -0.31
UBE3D-201ENST00000237186 IGHV1-8P0DP01 117 aa13.11□□□□□ -0.31
UBE3D-201ENST00000237186 MC5RP33032 325 aa13.11□□□□□ -0.31
UBE3D-201ENST00000237186 CHRNA7P36544 502 aa13.11□□□□□ -0.31
UBE3D-201ENST00000237186 CA7P43166 264 aa13.11□□□□□ -0.31
UBE3D-201ENST00000237186 ERHP84090 104 aaKnown RBP13.11□□□□□ -0.31
UBE3D-201ENST00000237186 TNFRSF14Q92956 283 aa13.11□□□□□ -0.31
UBE3D-201ENST00000237186 CHODLQ9H9P2 273 aa13.11□□□□□ -0.31
UBE3D-201ENST00000237186 WASHC3Q9Y3C0 194 aa13.11□□□□□ -0.31
UBE3D-201ENST00000237186 TLN1Q9Y490 2541 aaKnown RBP13.11□□□□□ -0.31
UBE3D-201ENST00000237186 ROS1P08922 2347 aa13.1□□□□□ -0.31
UBE3D-201ENST00000237186 ELOA3CA0A087WX78 387 aaPredicted RBP13.1□□□□□ -0.31
UBE3D-201ENST00000237186 AREGP15514 252 aa13.1□□□□□ -0.31
UBE3D-201ENST00000237186 REG1BP48304 166 aa13.1□□□□□ -0.31
UBE3D-201ENST00000237186 CASP6P55212 293 aa13.1□□□□□ -0.31
UBE3D-201ENST00000237186 SPATA31B1PQ5VZV4 182 aa13.1□□□□□ -0.31
UBE3D-201ENST00000237186 SLC16A13Q7RTY0 426 aa13.1□□□□□ -0.31
UBE3D-201ENST00000237186 IMMP2LQ96T52 175 aa13.1□□□□□ -0.31
UBE3D-201ENST00000237186 PPP1R2P9O14990 202 aa13.1□□□□□ -0.31
UBE3D-201ENST00000237186 CHRNB4P30926 498 aa13.1□□□□□ -0.31
UBE3D-201ENST00000237186 DIAPH2-AS1Q14236 149 aa13.1□□□□□ -0.31
UBE3D-201ENST00000237186 TGIF2LXQ8IUE1 241 aa13.1□□□□□ -0.31
UBE3D-201ENST00000237186 OR10W1Q8NGF6 305 aa13.1□□□□□ -0.31
UBE3D-201ENST00000237186 C11orf52Q96A22 123 aa13.1□□□□□ -0.31
UBE3D-201ENST00000237186 TMEM133Q9H2Q1 129 aa13.1□□□□□ -0.31
UBE3D-201ENST00000237186 FUT9Q9Y231 359 aa13.1□□□□□ -0.31
UBE3D-201ENST00000237186 YTHDF2Q9Y5A9 579 aaKnown RBP13.1□□□□□ -0.31
UBE3D-201ENST00000237186 TYMSP04818 313 aa13.09□□□□□ -0.31
UBE3D-201ENST00000237186 C1QTNF9P0C862 333 aa13.09□□□□□ -0.31
UBE3D-201ENST00000237186 LGALS7P47929 136 aa13.09□□□□□ -0.31
UBE3D-201ENST00000237186 FAM3BP58499 235 aaPredicted RBP13.09□□□□□ -0.31
UBE3D-201ENST00000237186 HLA-DRB5Q30154 266 aa13.09□□□□□ -0.31
UBE3D-201ENST00000237186 FAM78BQ5VT40 261 aa13.09□□□□□ -0.31
UBE3D-201ENST00000237186 RNASEH2CQ8TDP1 164 aaKnown RBP13.09□□□□□ -0.31
UBE3D-201ENST00000237186 DERL1Q9BUN8 251 aa13.09□□□□□ -0.31
UBE3D-201ENST00000237186 CGB1A6NKQ9 187 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 E7EUB6 86 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 PLAUP00749 431 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 IL3RAP26951 378 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 LCN2P80188 198 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 MOB3BQ86TA1 216 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 OR4P4Q8NGL7 312 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 OR4X1Q8NH49 305 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 ELOVL1Q9BW60 279 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 TMEM167BQ9NRX6 74 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 GAR1Q9NY12 217 aaKnown RBP13.08□□□□□ -0.32
UBE3D-201ENST00000237186 RALYQ9UKM9 306 aaKnown RBP13.08□□□□□ -0.32
UBE3D-201ENST00000237186 PCNX1Q96RV3 2341 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 PPP5D1E7EU14 171 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 FOXH1O75593 365 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 OR5G3P0C626 314 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 OR10J1P30954 320 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 ZNF841Q6ZN19 808 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 MIR17HGQ75NE6 70 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 HIST3H2BBQ8N257 126 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 OR2T10Q8NGZ9 312 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 LINC01560Q8TB33 94 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 BTF3L4Q96K17 158 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 PIEZO1Q92508 2521 aa13.08□□□□□ -0.32
UBE3D-201ENST00000237186 POLEQ07864 2286 aa13.07□□□□□ -0.32
UBE3D-201ENST00000237186 TRBV20OR9-2A0A075B6H5 130 aa13.07□□□□□ -0.32
UBE3D-201ENST00000237186 SCO2A0A1W2PP80 73 aa13.07□□□□□ -0.32
UBE3D-201ENST00000237186 PPOXP50336 477 aa13.07□□□□□ -0.32
UBE3D-201ENST00000237186 KLRB1Q12918 225 aa13.07□□□□□ -0.32
UBE3D-201ENST00000237186 FOXL1Q12952 345 aa13.07□□□□□ -0.32
UBE3D-201ENST00000237186 KCNIP4Q6PIL6 250 aa13.07□□□□□ -0.32
UBE3D-201ENST00000237186 PQLC2Q6ZP29 291 aa13.07□□□□□ -0.32
UBE3D-201ENST00000237186 NECAP1Q8NC96 275 aa13.07□□□□□ -0.32
UBE3D-201ENST00000237186 ST6GALNAC3Q8NDV1 305 aa13.07□□□□□ -0.32
UBE3D-201ENST00000237186 TECRQ9NZ01 308 aaKnown RBP13.07□□□□□ -0.32
UBE3D-201ENST00000237186 LY96Q9Y6Y9 160 aa13.07□□□□□ -0.32
UBE3D-201ENST00000237186 C9JCJ5 164 aa13.06□□□□□ -0.32
UBE3D-201ENST00000237186 WT1-ASQ06250 92 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms