RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 SOD3P08294 240 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 CGB3P0DN86 165 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 CGB7P0DN87 165 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 CCL3L1P16619 93 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 G6PCP35575 357 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 IER3P46695 156 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 RAB7AP51149 207 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 NHLH2Q02577 135 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 RNF151Q2KHN1 245 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 FAM74A3Q4VXF1 159 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 ZNF66Q6ZN08 573 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 Q6ZRM9 215 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 BAP18Q8IXM2 172 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 LYG1Q8N1E2 194 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 DMBX1Q8NFW5 382 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 OR52E5Q8NH55 327 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 NARS2Q96I59 477 aaKnown RBP4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 ZNF714Q96N38 554 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 TMEM204Q9BSN7 226 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 ELOVL1Q9BW60 279 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 CBLN4Q9NTU7 201 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 FAM24AA6NFZ4 105 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 H3BP45 60 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 TAAR5O14804 337 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 PROP1O75360 226 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 IGKV1-5P01602 117 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 WNT2P09544 360 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 LOXP28300 417 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 DUTP33316 252 aaKnown RBP4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 P2RY1P47900 373 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 SERTAD4-AS1Q5TG53 156 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 RPL7L1Q6DKI1 246 aaKnown RBP4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 TMEM217Q8N7C4 229 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 HSD17B11Q8NBQ5 300 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 RNASEH2CQ8TDP1 164 aaKnown RBP4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 C2CD4CQ8TF44 421 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 LSM10Q969L4 123 aaKnown RBP4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 C14orf144Q96I85 54 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 AJUBAQ96IF1 538 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 MED9Q9NWA0 146 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 IDI2-AS1Q9NZ38 188 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 CTSZQ9UBR2 303 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 MIOXQ9UGB7 285 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 CSMD1Q96PZ7 3565 aa4.41□□□□□ -1.7
TRAPPC13-201ENST00000231526 UTP20O75691 2785 aaKnown RBP4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 PLXNB1O43157 2135 aa4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 A0A1B0GUS0 222 aa4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 DNASE2O00115 360 aaPredicted RBP4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 JTBO76095 146 aa4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 ATG12O94817 140 aa4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 TOX4O94842 621 aa4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 PPOXP50336 477 aa4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 PLP1P60201 277 aa4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 EIF5AP63241 154 aaKnown RBP4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 CLINT1Q14677 625 aa4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 CT45A1Q5HYN5 189 aa4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 AVPI1Q5T686 147 aa4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 H2BFWTQ7Z2G1 175 aa4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 CT45A3Q8NHU0 189 aa4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 MRAPQ8TCY5 172 aa4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 TMED6Q8WW62 240 aa4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 PHYHIPLQ96FC7 376 aa4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 IFI27L2Q9H2X8 130 aa4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 KAAG1Q9UBP8 84 aa4.4□□□□□ -1.7
TRAPPC13-201ENST00000231526 ABCA1O95477 2261 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 SAA2-SAA4A0A096LPE2 208 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 A0A1W2PPR1 153 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 USP17L23D6RBM5 183 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 C19orf84I3L1E1 186 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 PPP1R2P9O14990 202 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 PPIHO43447 177 aaKnown RBP4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 FCN3O75636 299 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 CST7O76096 145 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 PRB1P04280 392 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 SAA2P0DJI9 122 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 IAPPP10997 89 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 SLC25A6P12236 298 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 BRWD1-AS2P59051 145 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 AKR1C1Q04828 323 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 MEF2CQ06413 473 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 MSMO1Q15800 293 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 HAGHQ16775 308 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 XP32Q5T750 250 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 TMEM200BQ69YZ2 307 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 TEPPQ6URK8 271 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 HSD17B13Q7Z5P4 300 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 TCTEX1D1Q8N7M0 179 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 S1PR3Q99500 378 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 CYTL1Q9NRR1 136 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 ZNRD1Q9P1U0 126 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 RPUSD1Q9UJJ7 312 aaKnown RBP4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 CSMD2Q7Z408 3487 aa4.4□□□□□ -1.71
TRAPPC13-201ENST00000231526 SYNGR2O43760 224 aa4.39□□□□□ -1.71
TRAPPC13-201ENST00000231526 GPR137BO60478 399 aa4.39□□□□□ -1.71
TRAPPC13-201ENST00000231526 PITX3O75364 302 aa4.39□□□□□ -1.71
TRAPPC13-201ENST00000231526 TMEM50AO95807 157 aa4.39□□□□□ -1.71
TRAPPC13-201ENST00000231526 RPL19P84098 196 aaKnown RBP4.39□□□□□ -1.71
TRAPPC13-201ENST00000231526 EWSR1Q01844 656 aaKnown RBP eCLIP4.39□□□□□ -1.71
TRAPPC13-201ENST00000231526 TLE4Q04727 773 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms